RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 NOMO1Q15155 1222 aa12.42□□□□□ -0.42
SSR4-205ENST00000447375 MEI1Q5TIA1 1274 aa12.42□□□□□ -0.42
SSR4-205ENST00000447375 CCDC181Q5TID7 509 aa12.42□□□□□ -0.42
SSR4-205ENST00000447375 ESRP1Q6NXG1 681 aaKnown RBP12.42□□□□□ -0.42
SSR4-205ENST00000447375 LIPIQ6XZB0 460 aa12.42□□□□□ -0.42
SSR4-205ENST00000447375 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.42□□□□□ -0.42
SSR4-205ENST00000447375 PAF1Q8N7H5 531 aa12.42□□□□□ -0.42
SSR4-205ENST00000447375 C9orf43Q8TAL5 461 aaPredicted RBP12.42□□□□□ -0.42
SSR4-205ENST00000447375 ACTL9Q8TC94 416 aa12.42□□□□□ -0.42
SSR4-205ENST00000447375 BTN2A2Q8WVV5 523 aa12.42□□□□□ -0.42
SSR4-205ENST00000447375 USP7Q93009 1102 aa12.42□□□□□ -0.42
SSR4-205ENST00000447375 TADA1Q96BN2 335 aa12.42□□□□□ -0.42
SSR4-205ENST00000447375 HAUS1Q96CS2 278 aa12.42□□□□□ -0.42
SSR4-205ENST00000447375 TMEM74Q96NL1 305 aa12.42□□□□□ -0.42
SSR4-205ENST00000447375 QKIQ96PU8 341 aaKnown RBP eCLIP12.42□□□□□ -0.42
SSR4-205ENST00000447375 PHF12Q96QT6 1004 aa12.42□□□□□ -0.42
SSR4-205ENST00000447375 MCCC1Q96RQ3 725 aaPredicted RBP12.42□□□□□ -0.42
SSR4-205ENST00000447375 VAT1Q99536 393 aa12.42□□□□□ -0.42
SSR4-205ENST00000447375 C1QTNF7Q9BXJ2 289 aa12.42□□□□□ -0.42
SSR4-205ENST00000447375 CEP41Q9BYV8 373 aa12.42□□□□□ -0.42
SSR4-205ENST00000447375 SLC25A51Q9H1U9 297 aa12.42□□□□□ -0.42
SSR4-205ENST00000447375 GLOD4Q9HC38 313 aa12.42□□□□□ -0.42
SSR4-205ENST00000447375 FOXJ2Q9P0K8 574 aa12.42□□□□□ -0.42
SSR4-205ENST00000447375 RPL26L1Q9UNX3 145 aaKnown RBP12.42□□□□□ -0.42
SSR4-205ENST00000447375 TTLL3Q9Y4R7 772 aa12.42□□□□□ -0.42
SSR4-205ENST00000447375 ICE1Q9Y2F5 2266 aa12.41□□□□□ -0.42
SSR4-205ENST00000447375 D6RAR5 112 aa12.41□□□□□ -0.42
SSR4-205ENST00000447375 AGRPO00253 132 aa12.41□□□□□ -0.42
SSR4-205ENST00000447375 FPGTO14772 594 aa12.41□□□□□ -0.42
SSR4-205ENST00000447375 GCATO75600 419 aa12.41□□□□□ -0.42
SSR4-205ENST00000447375 ANXA6P08133 673 aa12.41□□□□□ -0.42
SSR4-205ENST00000447375 CA4P22748 312 aa12.41□□□□□ -0.42
SSR4-205ENST00000447375 CCKBRP32239 447 aa12.41□□□□□ -0.42
SSR4-205ENST00000447375 CD86P42081 329 aa12.41□□□□□ -0.42
SSR4-205ENST00000447375 RABIFP47224 123 aa12.41□□□□□ -0.42
SSR4-205ENST00000447375 PFN3P60673 137 aa12.41□□□□□ -0.42
SSR4-205ENST00000447375 CCL7P80098 99 aa12.41□□□□□ -0.42
SSR4-205ENST00000447375 KLF1Q13351 362 aaPredicted RBP12.41□□□□□ -0.42
SSR4-205ENST00000447375 C1orf61Q13536 156 aa12.41□□□□□ -0.42
SSR4-205ENST00000447375 PDE1CQ14123 709 aaPredicted RBP12.41□□□□□ -0.42
SSR4-205ENST00000447375 GSE1Q14687 1217 aa12.41□□□□□ -0.42
SSR4-205ENST00000447375 SLC14A2Q15849 920 aa12.41□□□□□ -0.42
SSR4-205ENST00000447375 FAM182AQ5T1J6 154 aa12.41□□□□□ -0.42
SSR4-205ENST00000447375 FHL5Q5TD97 284 aa12.41□□□□□ -0.42
SSR4-205ENST00000447375 KYAT3Q6YP21 454 aaKnown RBP12.41□□□□□ -0.42
SSR4-205ENST00000447375 NDUFAF2Q8N183 169 aa12.41□□□□□ -0.42
SSR4-205ENST00000447375 TP53I13Q8NBR0 393 aaPredicted RBP12.41□□□□□ -0.42
SSR4-205ENST00000447375 TRIM58Q8NG06 486 aa12.41□□□□□ -0.42
SSR4-205ENST00000447375 JPH3Q8WXH2 748 aaPredicted RBP12.41□□□□□ -0.42
SSR4-205ENST00000447375 ALS2CR12Q96Q35 445 aa12.41□□□□□ -0.42
SSR4-205ENST00000447375 TDRD1Q9BXT4 1180 aaKnown RBP12.41□□□□□ -0.42
SSR4-205ENST00000447375 KCNF1Q9H3M0 494 aa12.41□□□□□ -0.42
SSR4-205ENST00000447375 PCDH9Q9HC56 1237 aa12.41□□□□□ -0.42
SSR4-205ENST00000447375 B4GALT6Q9UBX8 382 aa12.41□□□□□ -0.42
SSR4-205ENST00000447375 TRHDEQ9UKU6 1024 aa12.41□□□□□ -0.42
SSR4-205ENST00000447375 CHKBQ9Y259 395 aa12.41□□□□□ -0.42
SSR4-205ENST00000447375 SCN8AQ9UQD0 1980 aa12.41□□□□□ -0.42
SSR4-205ENST00000447375 UNC13CQ8NB66 2214 aa12.4□□□□□ -0.42
SSR4-205ENST00000447375 A0A0J9YYE9 177 aa12.4□□□□□ -0.42
SSR4-205ENST00000447375 A8MX80 341 aa12.4□□□□□ -0.42
SSR4-205ENST00000447375 H7C0C1 242 aa12.4□□□□□ -0.42
SSR4-205ENST00000447375 TOR1BO14657 336 aa12.4□□□□□ -0.42
SSR4-205ENST00000447375 RECQL5O94762 991 aaPredicted RBP12.4□□□□□ -0.42
SSR4-205ENST00000447375 HEXIM1O94992 359 aaKnown RBP12.4□□□□□ -0.42
SSR4-205ENST00000447375 TRBC1P01850 177 aa12.4□□□□□ -0.42
SSR4-205ENST00000447375 RBP3P10745 1247 aa12.4□□□□□ -0.42
SSR4-205ENST00000447375 ELAVL4P26378 380 aaKnown RBP12.4□□□□□ -0.42
SSR4-205ENST00000447375 CD82P27701 267 aa12.4□□□□□ -0.42
SSR4-205ENST00000447375 RBL1P28749 1068 aa12.4□□□□□ -0.42
SSR4-205ENST00000447375 VIPR1P32241 457 aa12.4□□□□□ -0.42
SSR4-205ENST00000447375 CD68P34810 354 aaPredicted RBP12.4□□□□□ -0.42
SSR4-205ENST00000447375 ETV5P41161 510 aa12.4□□□□□ -0.42
SSR4-205ENST00000447375 ATP5OP48047 213 aa12.4□□□□□ -0.42
SSR4-205ENST00000447375 MAPK10P53779 464 aa12.4□□□□□ -0.42
SSR4-205ENST00000447375 EIF3EP60228 445 aaKnown RBP12.4□□□□□ -0.42
SSR4-205ENST00000447375 LRRC14Q15048 493 aa12.4□□□□□ -0.42
SSR4-205ENST00000447375 PTPRRQ15256 657 aa12.4□□□□□ -0.42
SSR4-205ENST00000447375 RPS6KA1Q15418 735 aa12.4□□□□□ -0.42
SSR4-205ENST00000447375 WSCD2Q2TBF2 565 aa12.4□□□□□ -0.42
SSR4-205ENST00000447375 PRRT3Q5FWE3 981 aa12.4□□□□□ -0.42
SSR4-205ENST00000447375 ZNF787Q6DD87 383 aa12.4□□□□□ -0.42
SSR4-205ENST00000447375 USP45Q70EL2 814 aa12.4□□□□□ -0.42
SSR4-205ENST00000447375 RBFAQ8N0V3 343 aa12.4□□□□□ -0.42
SSR4-205ENST00000447375 ZNF567Q8N184 647 aa12.4□□□□□ -0.42
SSR4-205ENST00000447375 SDR16C5Q8N3Y7 309 aa12.4□□□□□ -0.42
SSR4-205ENST00000447375 TTC13Q8NBP0 860 aa12.4□□□□□ -0.42
SSR4-205ENST00000447375 SSC4DQ8WTU2 575 aa12.4□□□□□ -0.42
SSR4-205ENST00000447375 COQ10AQ96MF6 247 aa12.4□□□□□ -0.42
SSR4-205ENST00000447375 TRIB3Q96RU7 358 aa12.4□□□□□ -0.42
SSR4-205ENST00000447375 RBM15Q96T37 977 aaKnown RBP eCLIP12.4□□□□□ -0.42
SSR4-205ENST00000447375 TCEAL2Q9H3H9 227 aaPredicted RBP12.4□□□□□ -0.42
SSR4-205ENST00000447375 MBNL1Q9NR56 388 aaKnown RBP12.4□□□□□ -0.42
SSR4-205ENST00000447375 GULP1Q9UBP9 304 aa12.4□□□□□ -0.42
SSR4-205ENST00000447375 RABGEF1Q9UJ41 708 aa12.4□□□□□ -0.42
SSR4-205ENST00000447375 COQ6Q9Y2Z9 468 aa12.4□□□□□ -0.42
SSR4-205ENST00000447375 ARHGEF17Q96PE2 2063 aaPredicted RBP12.4□□□□□ -0.42
SSR4-205ENST00000447375 SPENQ96T58 3664 aaKnown RBP12.39□□□□□ -0.43
SSR4-205ENST00000447375 CACNA1DQ01668 2161 aa12.39□□□□□ -0.43
SSR4-205ENST00000447375 A0A1W2PQM1 296 aa12.39□□□□□ -0.43
SSR4-205ENST00000447375 GOLGA6L9A6NEM1 432 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms