RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 MATR3P43243 847 aaKnown RBP eCLIP5.01□□□□□ -1.61
SDCBP-205ENST00000447267 NUMBP49757 651 aa5.01□□□□□ -1.61
SDCBP-205ENST00000447267 NKX6-1P78426 367 aaPredicted RBP5.01□□□□□ -1.61
SDCBP-205ENST00000447267 PCOLCEQ15113 449 aa5.01□□□□□ -1.61
SDCBP-205ENST00000447267 STILQ15468 1287 aa5.01□□□□□ -1.61
SDCBP-205ENST00000447267 DEFB113Q30KQ7 82 aa5.01□□□□□ -1.61
SDCBP-205ENST00000447267 EDRF1Q3B7T1 1238 aa5.01□□□□□ -1.61
SDCBP-205ENST00000447267 FIGNQ5HY92 759 aa5.01□□□□□ -1.61
SDCBP-205ENST00000447267 AGBL4Q5VU57 503 aa5.01□□□□□ -1.61
SDCBP-205ENST00000447267 C4orf50Q6ZRC1 276 aa5.01□□□□□ -1.61
SDCBP-205ENST00000447267 MCPH1Q8NEM0 835 aa5.01□□□□□ -1.61
SDCBP-205ENST00000447267 WFDC5Q8TCV5 224 aa5.01□□□□□ -1.61
SDCBP-205ENST00000447267 ADAMTS18Q8TE60 1221 aa5.01□□□□□ -1.61
SDCBP-205ENST00000447267 HAS1Q92839 578 aa5.01□□□□□ -1.61
SDCBP-205ENST00000447267 NACC2Q96BF6 587 aa5.01□□□□□ -1.61
SDCBP-205ENST00000447267 C8orf48Q96LL4 319 aa5.01□□□□□ -1.61
SDCBP-205ENST00000447267 CDK5RAP1Q96SZ6 601 aaKnown RBP5.01□□□□□ -1.61
SDCBP-205ENST00000447267 SMAD5Q99717 465 aaKnown RBP5.01□□□□□ -1.61
SDCBP-205ENST00000447267 HSD17B14Q9BPX1 270 aa5.01□□□□□ -1.61
SDCBP-205ENST00000447267 POLDIP3Q9BY77 421 aaKnown RBP5.01□□□□□ -1.61
SDCBP-205ENST00000447267 LRRC2Q9BYS8 371 aa5.01□□□□□ -1.61
SDCBP-205ENST00000447267 CHMP4BQ9H444 224 aaKnown RBP5.01□□□□□ -1.61
SDCBP-205ENST00000447267 ZBTB20Q9HC78 741 aaPredicted RBP5.01□□□□□ -1.61
SDCBP-205ENST00000447267 OSER1Q9NX31 292 aa5.01□□□□□ -1.61
SDCBP-205ENST00000447267 GPR83Q9NYM4 423 aa5.01□□□□□ -1.61
SDCBP-205ENST00000447267 EHD2Q9NZN4 543 aa5.01□□□□□ -1.61
SDCBP-205ENST00000447267 LRFN1Q9P244 771 aa5.01□□□□□ -1.61
SDCBP-205ENST00000447267 ARMCX1Q9P291 453 aa5.01□□□□□ -1.61
SDCBP-205ENST00000447267 SLCO3A1Q9UIG8 710 aa5.01□□□□□ -1.61
SDCBP-205ENST00000447267 GGA2Q9UJY4 613 aa5.01□□□□□ -1.61
SDCBP-205ENST00000447267 OAZ3Q9UMX2 235 aa5.01□□□□□ -1.61
SDCBP-205ENST00000447267 G3BP2Q9UN86 482 aaKnown RBP5.01□□□□□ -1.61
SDCBP-205ENST00000447267 TCAF1Q9Y4C2 921 aa5.01□□□□□ -1.61
SDCBP-205ENST00000447267 CSAG2Q9Y5P2 127 aa5.01□□□□□ -1.61
SDCBP-205ENST00000447267 ATP23Q9Y6H3 246 aa5.01□□□□□ -1.61
SDCBP-205ENST00000447267 SVEP1Q4LDE5 3571 aa5.01□□□□□ -1.61
SDCBP-205ENST00000447267 ANK3Q12955 4377 aaKnown RBP5.01□□□□□ -1.61
SDCBP-205ENST00000447267 SONP18583 2426 aaKnown RBP5.01□□□□□ -1.61
SDCBP-205ENST00000447267 WNK1Q9H4A3 2382 aa5□□□□□ -1.61
SDCBP-205ENST00000447267 A0A0U1RQS6 177 aa5□□□□□ -1.61
SDCBP-205ENST00000447267 CCDC66A2RUB6 948 aa5□□□□□ -1.61
SDCBP-205ENST00000447267 TRIM64A6NGJ6 449 aa5□□□□□ -1.61
SDCBP-205ENST00000447267 TRIM64BA6NI03 449 aa5□□□□□ -1.61
SDCBP-205ENST00000447267 CLDN5O00501 218 aa5□□□□□ -1.61
SDCBP-205ENST00000447267 AQP7O14520 342 aa5□□□□□ -1.61
SDCBP-205ENST00000447267 XPOTO43592 962 aaKnown RBP5□□□□□ -1.61
SDCBP-205ENST00000447267 STC2O76061 302 aa5□□□□□ -1.61
SDCBP-205ENST00000447267 SLCO2B1O94956 709 aa5□□□□□ -1.61
SDCBP-205ENST00000447267 RASGRP1O95267 797 aa5□□□□□ -1.61
SDCBP-205ENST00000447267 LYPLA2O95372 231 aa5□□□□□ -1.61
SDCBP-205ENST00000447267 PAK4O96013 591 aaPredicted RBP5□□□□□ -1.61
SDCBP-205ENST00000447267 MMEP08473 750 aa5□□□□□ -1.61
SDCBP-205ENST00000447267 HOXD9P28356 352 aaPredicted RBP5□□□□□ -1.61
SDCBP-205ENST00000447267 CD1CP29017 333 aa5□□□□□ -1.61
SDCBP-205ENST00000447267 CD70P32970 193 aa5□□□□□ -1.61
SDCBP-205ENST00000447267 ETV4P43268 484 aa5□□□□□ -1.61
SDCBP-205ENST00000447267 SMSP52788 366 aa5□□□□□ -1.61
SDCBP-205ENST00000447267 LIMK2P53671 638 aa5□□□□□ -1.61
SDCBP-205ENST00000447267 PDE1AP54750 535 aa5□□□□□ -1.61
SDCBP-205ENST00000447267 ST8SIA6P61647 398 aa5□□□□□ -1.61
SDCBP-205ENST00000447267 MC2RQ01718 297 aa5□□□□□ -1.61
SDCBP-205ENST00000447267 DNASE1L3Q13609 305 aa5□□□□□ -1.61
SDCBP-205ENST00000447267 IL10RAQ13651 578 aa5□□□□□ -1.61
SDCBP-205ENST00000447267 KCNAB1Q14722 419 aa5□□□□□ -1.61
SDCBP-205ENST00000447267 KYNUQ16719 465 aa5□□□□□ -1.61
SDCBP-205ENST00000447267 UGT8Q16880 541 aa5□□□□□ -1.61
SDCBP-205ENST00000447267 LONRF1Q17RB8 773 aa5□□□□□ -1.61
SDCBP-205ENST00000447267 SNX30Q5VWJ9 437 aa5□□□□□ -1.61
SDCBP-205ENST00000447267 LYPLAL1Q5VWZ2 237 aa5□□□□□ -1.61
SDCBP-205ENST00000447267 CES4AQ5XG92 561 aa5□□□□□ -1.61
SDCBP-205ENST00000447267 KANK2Q63ZY3 851 aa5□□□□□ -1.61
SDCBP-205ENST00000447267 HORMAD1Q86X24 394 aa5□□□□□ -1.61
SDCBP-205ENST00000447267 HPS6Q86YV9 775 aa5□□□□□ -1.61
SDCBP-205ENST00000447267 DENND1CQ8IV53 801 aa5□□□□□ -1.61
SDCBP-205ENST00000447267 NUP93Q8N1F7 819 aa5□□□□□ -1.61
SDCBP-205ENST00000447267 DNAAF3Q8N9W5 541 aa5□□□□□ -1.61
SDCBP-205ENST00000447267 GPR156Q8NFN8 814 aa5□□□□□ -1.61
SDCBP-205ENST00000447267 NCOA7Q8NI08 942 aa5□□□□□ -1.61
SDCBP-205ENST00000447267 CT55Q8WUE5 264 aa5□□□□□ -1.61
SDCBP-205ENST00000447267 RILPL2Q969X0 211 aa5□□□□□ -1.61
SDCBP-205ENST00000447267 PCED1BQ96HM7 432 aa5□□□□□ -1.61
SDCBP-205ENST00000447267 IFT74Q96LB3 600 aa5□□□□□ -1.61
SDCBP-205ENST00000447267 TEFMQ96QE5 360 aaKnown RBP5□□□□□ -1.61
SDCBP-205ENST00000447267 KCNK16Q96T55 309 aa5□□□□□ -1.61
SDCBP-205ENST00000447267 SYT15Q9BQS2 421 aa5□□□□□ -1.61
SDCBP-205ENST00000447267 SLC2A11Q9BYW1 496 aa5□□□□□ -1.61
SDCBP-205ENST00000447267 SLC13A1Q9BZW2 595 aa5□□□□□ -1.61
SDCBP-205ENST00000447267 CCSER1Q9C0I3 900 aa5□□□□□ -1.61
SDCBP-205ENST00000447267 ACTL8Q9H568 366 aa5□□□□□ -1.61
SDCBP-205ENST00000447267 DPP3Q9NY33 737 aa5□□□□□ -1.61
SDCBP-205ENST00000447267 AGO1Q9UL18 857 aaKnown RBP5□□□□□ -1.61
SDCBP-205ENST00000447267 HS3ST3A1Q9Y663 406 aa5□□□□□ -1.61
SDCBP-205ENST00000447267 SCN1AP35498 2009 aa5□□□□□ -1.61
SDCBP-205ENST00000447267 UNC13CQ8NB66 2214 aa4.99□□□□□ -1.61
SDCBP-205ENST00000447267 VWA3AA6NCI4 1184 aa4.99□□□□□ -1.61
SDCBP-205ENST00000447267 PRC1O43663 620 aa4.99□□□□□ -1.61
SDCBP-205ENST00000447267 CUTAO60888 179 aa4.99□□□□□ -1.61
SDCBP-205ENST00000447267 HUS1O60921 280 aa4.99□□□□□ -1.61
SDCBP-205ENST00000447267 TMEM63AO94886 807 aa4.99□□□□□ -1.61
SDCBP-205ENST00000447267 PCDH8O95206 1070 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms