RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 CFAP52Q8N1V2 620 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 CHST14Q8NCH0 376 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 KIAA1524Q8TCG1 905 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 TMEM158Q8WZ71 300 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 TAF4BQ92750 862 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 STAMBPL1Q96FJ0 436 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 PDXPQ96GD0 296 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 CBWD1Q9BRT8 395 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 RSRP1Q9BUV0 290 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 RWDD1Q9H446 243 aaPredicted RBP3.26□□□□□ -1.89
PMS1-215ENST00000447232 DPEP2Q9H4A9 486 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 PDE7BQ9NP56 450 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 AJAP1Q9UKB5 411 aaPredicted RBP3.26□□□□□ -1.89
PMS1-215ENST00000447232 PADI1Q9ULC6 663 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 HS3ST2Q9Y278 367 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 PLEKHM1Q9Y4G2 1056 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 CHD3Q12873 2000 aaKnown RBP3.26□□□□□ -1.89
PMS1-215ENST00000447232 FITM1A5D6W6 292 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 A6NL46 340 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 PPM1DO15297 605 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 DTNBO60941 627 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 JRKO75564 520 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 KIAA0754O94854 1291 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 CTDNEP1O95476 244 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 TNFP01375 233 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 FGF1P05230 155 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 SRCP12931 536 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 PDGFRAP16234 1089 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 ATICP31939 592 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 L1CAMP32004 1257 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 NUMBP49757 651 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 KCNK10P57789 538 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 SURF1Q15526 300 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 TMEM119Q4V9L6 283 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 BMP2KLQ5H9B9 411 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 DIEXFQ68CQ4 756 aaKnown RBP3.26□□□□□ -1.89
PMS1-215ENST00000447232 CXorf57Q6NSI4 855 aaKnown RBP3.26□□□□□ -1.89
PMS1-215ENST00000447232 WDR74Q6RFH5 385 aaPredicted RBP3.26□□□□□ -1.89
PMS1-215ENST00000447232 ENPP7Q6UWV6 458 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 MED25Q71SY5 747 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 VPS36Q86VN1 386 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 UNC93AQ86WB7 457 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 IRF2BP1Q8IU81 584 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 UNC45BQ8IWX7 931 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 GPD1LQ8N335 351 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 CCL4L1Q8NHW4 92 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 MBD6Q96DN6 1003 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 PPP1R16AQ96I34 528 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 TRAPPC9Q96Q05 1148 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 DUSP16Q9BY84 665 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 RAB34Q9BZG1 259 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 SPATS2LQ9NUQ6 558 aaKnown RBP3.26□□□□□ -1.89
PMS1-215ENST00000447232 KLQ9UEF7 1012 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 KLHL3Q9UH77 587 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 OR51B4Q9Y5P0 310 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 PIKFYVEQ9Y2I7 2098 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 MYOCOSA0A1B0GUC4 107 aa3.25□□□□□ -1.89
PMS1-215ENST00000447232 TLCD2A6NGC4 264 aa3.25□□□□□ -1.89
PMS1-215ENST00000447232 A8MU76 341 aa3.25□□□□□ -1.89
PMS1-215ENST00000447232 PROM1O43490 865 aa3.25□□□□□ -1.89
PMS1-215ENST00000447232 EIF5BO60841 1220 aaKnown RBP3.25□□□□□ -1.89
PMS1-215ENST00000447232 NDUFA10O95299 355 aa3.25□□□□□ -1.89
PMS1-215ENST00000447232 MT-ND3P03897 115 aa3.25□□□□□ -1.89
PMS1-215ENST00000447232 HTR1BP28222 390 aa3.25□□□□□ -1.89
PMS1-215ENST00000447232 HOXC12P31275 282 aa3.25□□□□□ -1.89
PMS1-215ENST00000447232 TEKQ02763 1124 aa3.25□□□□□ -1.89
PMS1-215ENST00000447232 STK3Q13188 491 aa3.25□□□□□ -1.89
PMS1-215ENST00000447232 RAPSNQ13702 412 aa3.25□□□□□ -1.89
PMS1-215ENST00000447232 IRF4Q15306 451 aa3.25□□□□□ -1.89
PMS1-215ENST00000447232 FCRL6Q6DN72 434 aa3.25□□□□□ -1.89
PMS1-215ENST00000447232 HIST2H2BDQ6DRA6 164 aa3.25□□□□□ -1.89
PMS1-215ENST00000447232 MSANTD2Q6P1R3 559 aa3.25□□□□□ -1.89
PMS1-215ENST00000447232 TMEM200AQ86VY9 491 aa3.25□□□□□ -1.89
PMS1-215ENST00000447232 CBWD2Q8IUF1 395 aa3.25□□□□□ -1.89
PMS1-215ENST00000447232 RELL1Q8IUW5 271 aa3.25□□□□□ -1.89
PMS1-215ENST00000447232 FBXO27Q8NI29 283 aa3.25□□□□□ -1.89
PMS1-215ENST00000447232 OR1E3Q8WZA6 343 aa3.25□□□□□ -1.89
PMS1-215ENST00000447232 SYAP1Q96A49 352 aaPredicted RBP3.25□□□□□ -1.89
PMS1-215ENST00000447232 RNF31Q96EP0 1072 aa3.25□□□□□ -1.89
PMS1-215ENST00000447232 CYFIP2Q96F07 1278 aa3.25□□□□□ -1.89
PMS1-215ENST00000447232 TWNKQ96RR1 684 aa3.25□□□□□ -1.89
PMS1-215ENST00000447232 ASPNQ9BXN1 380 aa3.25□□□□□ -1.89
PMS1-215ENST00000447232 UBXN6Q9BZV1 441 aa3.25□□□□□ -1.89
PMS1-215ENST00000447232 TMEM168Q9H0V1 697 aa3.25□□□□□ -1.89
PMS1-215ENST00000447232 LIME1Q9H400 295 aa3.25□□□□□ -1.89
PMS1-215ENST00000447232 ZNF552Q9H707 407 aaPredicted RBP3.25□□□□□ -1.89
PMS1-215ENST00000447232 AKIRIN1Q9H9L7 192 aaPredicted RBP3.25□□□□□ -1.89
PMS1-215ENST00000447232 IL36AQ9UHA7 158 aa3.25□□□□□ -1.89
PMS1-215ENST00000447232 SLC25A13Q9UJS0 675 aa3.25□□□□□ -1.89
PMS1-215ENST00000447232 ITM2BQ9Y287 266 aa3.25□□□□□ -1.89
PMS1-215ENST00000447232 CSAG2Q9Y5P2 127 aa3.25□□□□□ -1.89
PMS1-215ENST00000447232 HRNRQ86YZ3 2850 aaPredicted RBP3.25□□□□□ -1.89
PMS1-215ENST00000447232 SVEP1Q4LDE5 3571 aa3.25□□□□□ -1.89
PMS1-215ENST00000447232 TRGV8A0A0C4DH27 118 aa3.25□□□□□ -1.89
PMS1-215ENST00000447232 TCAF2A6NFQ2 919 aa3.25□□□□□ -1.89
PMS1-215ENST00000447232 NOTOA8MTQ0 251 aa3.25□□□□□ -1.89
PMS1-215ENST00000447232 AREL1O15033 823 aa3.25□□□□□ -1.89
PMS1-215ENST00000447232 KIAA0391O15091 583 aaKnown RBP3.25□□□□□ -1.89
PMS1-215ENST00000447232 SLC26A4O43511 780 aa3.25□□□□□ -1.89
PMS1-215ENST00000447232 STX6O43752 255 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms