RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 SLC4A1P02730 911 aa18.48■□□□□ 0.55
CCDC188-202ENST00000444532 ATP1A1P05023 1023 aaKnown RBP18.48■□□□□ 0.55
CCDC188-202ENST00000444532 GLB1P16278 677 aa18.48■□□□□ 0.55
CCDC188-202ENST00000444532 BPIP17213 487 aa18.48■□□□□ 0.55
CCDC188-202ENST00000444532 CHRNA4P43681 627 aa18.48■□□□□ 0.55
CCDC188-202ENST00000444532 CTBSQ01459 385 aa18.48■□□□□ 0.55
CCDC188-202ENST00000444532 LRP8Q14114 963 aa18.48■□□□□ 0.55
CCDC188-202ENST00000444532 RPS6KA1Q15418 735 aa18.48■□□□□ 0.55
CCDC188-202ENST00000444532 ZDHHC20Q5W0Z9 365 aa18.48■□□□□ 0.55
CCDC188-202ENST00000444532 RANBP10Q6VN20 620 aa18.48■□□□□ 0.55
CCDC188-202ENST00000444532 GALNT13Q8IUC8 556 aa18.48■□□□□ 0.55
CCDC188-202ENST00000444532 TTC30BQ8N4P2 665 aa18.48■□□□□ 0.55
CCDC188-202ENST00000444532 SLC35B2Q8TB61 432 aa18.48■□□□□ 0.55
CCDC188-202ENST00000444532 CCDC110Q8TBZ0 833 aa18.48■□□□□ 0.55
CCDC188-202ENST00000444532 OR2M4Q96R27 311 aa18.48■□□□□ 0.55
CCDC188-202ENST00000444532 CCDC3Q9BQI4 270 aa18.48■□□□□ 0.55
CCDC188-202ENST00000444532 GORASP1Q9BQQ3 440 aa18.48■□□□□ 0.55
CCDC188-202ENST00000444532 SPATS2LQ9NUQ6 558 aaKnown RBP18.48■□□□□ 0.55
CCDC188-202ENST00000444532 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.48■□□□□ 0.55
CCDC188-202ENST00000444532 TAAR2Q9P1P5 351 aa18.48■□□□□ 0.55
CCDC188-202ENST00000444532 OAS3Q9Y6K5 1087 aaKnown RBP18.48■□□□□ 0.55
CCDC188-202ENST00000444532 RP1P56715 2156 aa18.47■□□□□ 0.55
CCDC188-202ENST00000444532 ARHGEF17Q96PE2 2063 aaPredicted RBP18.47■□□□□ 0.55
CCDC188-202ENST00000444532 TCRBV7S2A1N4TA0A589 114 aa18.47■□□□□ 0.55
CCDC188-202ENST00000444532 B4DGG1 531 aa18.47■□□□□ 0.55
CCDC188-202ENST00000444532 DNAJC6O75061 913 aa18.47■□□□□ 0.55
CCDC188-202ENST00000444532 PPFIA2O75334 1257 aa18.47■□□□□ 0.55
CCDC188-202ENST00000444532 TCEA3O75764 348 aa18.47■□□□□ 0.55
CCDC188-202ENST00000444532 SLC25A14O95258 325 aaPredicted RBP18.47■□□□□ 0.55
CCDC188-202ENST00000444532 AGTP01019 485 aa18.47■□□□□ 0.55
CCDC188-202ENST00000444532 PNLIPP16233 465 aa18.47■□□□□ 0.55
CCDC188-202ENST00000444532 PSMB4P28070 264 aa18.47■□□□□ 0.55
CCDC188-202ENST00000444532 C14orf28Q4W4Y0 310 aa18.47■□□□□ 0.55
CCDC188-202ENST00000444532 ZNF569Q5MCW4 686 aa18.47■□□□□ 0.55
CCDC188-202ENST00000444532 CERCAMQ5T4B2 595 aa18.47■□□□□ 0.55
CCDC188-202ENST00000444532 ALS2CLQ60I27 953 aa18.47■□□□□ 0.55
CCDC188-202ENST00000444532 MARK2Q7KZI7 788 aaKnown RBP18.47■□□□□ 0.55
CCDC188-202ENST00000444532 FAM71DQ8N9W8 422 aa18.47■□□□□ 0.55
CCDC188-202ENST00000444532 DTX3LQ8TDB6 740 aa18.47■□□□□ 0.55
CCDC188-202ENST00000444532 BLOC1S5Q8TDH9 187 aa18.47■□□□□ 0.55
CCDC188-202ENST00000444532 ZDHHC1Q8WTX9 485 aa18.47■□□□□ 0.55
CCDC188-202ENST00000444532 LRRC45Q96CN5 670 aa18.47■□□□□ 0.55
CCDC188-202ENST00000444532 GRAMD1AQ96CP6 724 aa18.47■□□□□ 0.55
CCDC188-202ENST00000444532 NXPE2Q96DL1 559 aa18.47■□□□□ 0.55
CCDC188-202ENST00000444532 FICDQ9BVA6 458 aa18.47■□□□□ 0.55
CCDC188-202ENST00000444532 FRMD8P1Q9BZ68 369 aaPredicted RBP18.47■□□□□ 0.55
CCDC188-202ENST00000444532 CARD9Q9H257 536 aa18.47■□□□□ 0.55
CCDC188-202ENST00000444532 IL17CQ9P0M4 197 aa18.47■□□□□ 0.55
CCDC188-202ENST00000444532 ZNHIT2Q9UHR6 403 aa18.47■□□□□ 0.55
CCDC188-202ENST00000444532 APPL1Q9UKG1 709 aa18.47■□□□□ 0.55
CCDC188-202ENST00000444532 R3HDM2Q9Y2K5 976 aaKnown RBP18.47■□□□□ 0.55
CCDC188-202ENST00000444532 ST14Q9Y5Y6 855 aa18.47■□□□□ 0.55
CCDC188-202ENST00000444532 EPG5Q9HCE0 2579 aa18.47■□□□□ 0.55
CCDC188-202ENST00000444532 GPR89AB7ZAQ6 455 aa18.46■□□□□ 0.55
CCDC188-202ENST00000444532 GPR89BP0CG08 455 aa18.46■□□□□ 0.55
CCDC188-202ENST00000444532 AK4P27144 223 aaPredicted RBP18.46■□□□□ 0.55
CCDC188-202ENST00000444532 ADRA1AP35348 466 aa18.46■□□□□ 0.55
CCDC188-202ENST00000444532 HLTFQ14527 1009 aaKnown RBP eCLIP18.46■□□□□ 0.55
CCDC188-202ENST00000444532 RTP5Q14D33 572 aa18.46■□□□□ 0.55
CCDC188-202ENST00000444532 PARP6Q2NL67 630 aa18.46■□□□□ 0.55
CCDC188-202ENST00000444532 SLC30A9Q6PML9 568 aa18.46■□□□□ 0.55
CCDC188-202ENST00000444532 ARHGEF18Q6ZSZ5 1173 aa18.46■□□□□ 0.55
CCDC188-202ENST00000444532 GLT6D1Q7Z4J2 308 aa18.46■□□□□ 0.55
CCDC188-202ENST00000444532 C17orf82Q86X59 251 aaPredicted RBP18.46■□□□□ 0.55
CCDC188-202ENST00000444532 SLC13A5Q86YT5 568 aaPredicted RBP18.46■□□□□ 0.55
CCDC188-202ENST00000444532 KLHDC8BQ8IXV7 354 aa18.46■□□□□ 0.55
CCDC188-202ENST00000444532 TRIM58Q8NG06 486 aa18.46■□□□□ 0.55
CCDC188-202ENST00000444532 MDM1Q8TC05 714 aa18.46■□□□□ 0.55
CCDC188-202ENST00000444532 GLYATL1Q969I3 302 aa18.46■□□□□ 0.55
CCDC188-202ENST00000444532 CCDC74AQ96AQ1 378 aa18.46■□□□□ 0.55
CCDC188-202ENST00000444532 TRIM39Q9HCM9 518 aa18.46■□□□□ 0.55
CCDC188-202ENST00000444532 BPIFA1Q9NP55 256 aa18.46■□□□□ 0.55
CCDC188-202ENST00000444532 PPP2R2CQ9Y2T4 447 aa18.46■□□□□ 0.55
CCDC188-202ENST00000444532 PKP3Q9Y446 797 aa18.46■□□□□ 0.55
CCDC188-202ENST00000444532 ZFC3H1O60293 1989 aaKnown RBP18.46■□□□□ 0.55
CCDC188-202ENST00000444532 KMT2BQ9UMN6 2715 aaPredicted RBP18.45■□□□□ 0.54
CCDC188-202ENST00000444532 USP24Q9UPU5 2620 aa18.45■□□□□ 0.54
CCDC188-202ENST00000444532 NUDT21O43809 227 aaKnown RBP18.45■□□□□ 0.54
CCDC188-202ENST00000444532 NUAK1O60285 661 aa18.45■□□□□ 0.54
CCDC188-202ENST00000444532 CSO75390 466 aaKnown RBP18.45■□□□□ 0.54
CCDC188-202ENST00000444532 STIP1P31948 543 aaKnown RBP18.45■□□□□ 0.54
CCDC188-202ENST00000444532 ACTR1BP42025 376 aa18.45■□□□□ 0.54
CCDC188-202ENST00000444532 ACTR1AP61163 376 aa18.45■□□□□ 0.54
CCDC188-202ENST00000444532 CYP4F3Q08477 520 aa18.45■□□□□ 0.54
CCDC188-202ENST00000444532 RBM44Q6ZP01 1051 aaKnown RBP18.45■□□□□ 0.54
CCDC188-202ENST00000444532 PROSER1Q86XN7 944 aa18.45■□□□□ 0.54
CCDC188-202ENST00000444532 PHYKPLQ8IUZ5 450 aa18.45■□□□□ 0.54
CCDC188-202ENST00000444532 VPS35Q96QK1 796 aa18.45■□□□□ 0.54
CCDC188-202ENST00000444532 TMEM121Q9BTD3 319 aa18.45■□□□□ 0.54
CCDC188-202ENST00000444532 LRIT1Q9P2V4 623 aa18.45■□□□□ 0.54
CCDC188-202ENST00000444532 ATXN10Q9UBB4 475 aa18.45■□□□□ 0.54
CCDC188-202ENST00000444532 FEZ2Q9UHY8 353 aaPredicted RBP18.45■□□□□ 0.54
CCDC188-202ENST00000444532 PLEKHM1Q9Y4G2 1056 aa18.45■□□□□ 0.54
CCDC188-202ENST00000444532 COL27A1Q8IZC6 1860 aaPredicted RBP18.45■□□□□ 0.54
CCDC188-202ENST00000444532 IGF2RP11717 2491 aa18.45■□□□□ 0.54
CCDC188-202ENST00000444532 NTN3O00634 580 aaPredicted RBP18.44■□□□□ 0.54
CCDC188-202ENST00000444532 SPIDRQ14159 915 aa18.44■□□□□ 0.54
CCDC188-202ENST00000444532 TAF1AQ15573 450 aaPredicted RBP18.44■□□□□ 0.54
CCDC188-202ENST00000444532 ISXQ2M1V0 245 aa18.44■□□□□ 0.54
CCDC188-202ENST00000444532 CHST15Q7LFX5 561 aaPredicted RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms