RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 ZSCAN5DPP0CG00 497 aa17.32■□□□□ 0.36
SMARCAL1-209ENST00000444508 CKMT2P17540 419 aa17.32■□□□□ 0.36
SMARCAL1-209ENST00000444508 ILF3Q12906 894 aaKnown RBP eCLIP17.32■□□□□ 0.36
SMARCAL1-209ENST00000444508 SEMA5AQ13591 1074 aa17.32■□□□□ 0.36
SMARCAL1-209ENST00000444508 CCDC157Q569K6 752 aa17.32■□□□□ 0.36
SMARCAL1-209ENST00000444508 LVRNQ6Q4G3 990 aa17.32■□□□□ 0.36
SMARCAL1-209ENST00000444508 PPP1R21Q6ZMI0 780 aa17.32■□□□□ 0.36
SMARCAL1-209ENST00000444508 TAF8Q7Z7C8 310 aa17.32■□□□□ 0.36
SMARCAL1-209ENST00000444508 PHYKPLQ8IUZ5 450 aa17.32■□□□□ 0.36
SMARCAL1-209ENST00000444508 DNAAF3Q8N9W5 541 aa17.32■□□□□ 0.36
SMARCAL1-209ENST00000444508 FAM181AQ8N9Y4 354 aa17.32■□□□□ 0.36
SMARCAL1-209ENST00000444508 APOLD1Q96LR9 279 aa17.32■□□□□ 0.36
SMARCAL1-209ENST00000444508 KCND1Q9NSA2 647 aa17.32■□□□□ 0.36
SMARCAL1-209ENST00000444508 SMARCAL1Q9NZC9 954 aa17.32■□□□□ 0.36
SMARCAL1-209ENST00000444508 VPS18Q9P253 973 aa17.32■□□□□ 0.36
SMARCAL1-209ENST00000444508 CNOT6Q9ULM6 557 aaKnown RBP17.32■□□□□ 0.36
SMARCAL1-209ENST00000444508 GLYATL1P3A0A0U1RQE8 302 aa17.31■□□□□ 0.36
SMARCAL1-209ENST00000444508 ZNF185O15231 689 aa17.31■□□□□ 0.36
SMARCAL1-209ENST00000444508 SUN1O94901 812 aa17.31■□□□□ 0.36
SMARCAL1-209ENST00000444508 APRTP07741 180 aa17.31■□□□□ 0.36
SMARCAL1-209ENST00000444508 DUSP3P51452 185 aaPredicted RBP17.31■□□□□ 0.36
SMARCAL1-209ENST00000444508 BASP1P80723 227 aaKnown RBP17.31■□□□□ 0.36
SMARCAL1-209ENST00000444508 CDH17Q12864 832 aa17.31■□□□□ 0.36
SMARCAL1-209ENST00000444508 FOXC1Q12948 553 aa17.31■□□□□ 0.36
SMARCAL1-209ENST00000444508 DNAJC3Q13217 504 aa17.31■□□□□ 0.36
SMARCAL1-209ENST00000444508 C6orf132Q5T0Z8 1188 aa17.31■□□□□ 0.36
SMARCAL1-209ENST00000444508 FAM151BQ6UXP7 276 aa17.31■□□□□ 0.36
SMARCAL1-209ENST00000444508 MARK2Q7KZI7 788 aaKnown RBP17.31■□□□□ 0.36
SMARCAL1-209ENST00000444508 GALNT13Q8IUC8 556 aa17.31■□□□□ 0.36
SMARCAL1-209ENST00000444508 PNPLA1Q8N8W4 532 aa17.31■□□□□ 0.36
SMARCAL1-209ENST00000444508 OR4K2Q8NGD2 314 aa17.31■□□□□ 0.36
SMARCAL1-209ENST00000444508 DTX3LQ8TDB6 740 aa17.31■□□□□ 0.36
SMARCAL1-209ENST00000444508 GLYATL1Q969I3 302 aa17.31■□□□□ 0.36
SMARCAL1-209ENST00000444508 OR2M4Q96R27 311 aa17.31■□□□□ 0.36
SMARCAL1-209ENST00000444508 GSDMCQ9BYG8 508 aa17.31■□□□□ 0.36
SMARCAL1-209ENST00000444508 TMEM168Q9H0V1 697 aa17.31■□□□□ 0.36
SMARCAL1-209ENST00000444508 IL26Q9NPH9 171 aa17.31■□□□□ 0.36
SMARCAL1-209ENST00000444508 TRNAU1APQ9NX07 287 aaKnown RBP17.31■□□□□ 0.36
SMARCAL1-209ENST00000444508 GPSM3Q9Y4H4 160 aa17.31■□□□□ 0.36
SMARCAL1-209ENST00000444508 SAR1BQ9Y6B6 198 aa17.31■□□□□ 0.36
SMARCAL1-209ENST00000444508 OAS3Q9Y6K5 1087 aaKnown RBP17.31■□□□□ 0.36
SMARCAL1-209ENST00000444508 GOLGA4Q13439 2230 aaKnown RBP17.31■□□□□ 0.36
SMARCAL1-209ENST00000444508 PHF2O75151 1096 aa17.3■□□□□ 0.36
SMARCAL1-209ENST00000444508 RFPL3O75679 317 aa17.3■□□□□ 0.36
SMARCAL1-209ENST00000444508 CKMT1AP12532 417 aa17.3■□□□□ 0.36
SMARCAL1-209ENST00000444508 TPH1P17752 444 aa17.3■□□□□ 0.36
SMARCAL1-209ENST00000444508 COILP38432 576 aaPredicted RBP17.3■□□□□ 0.36
SMARCAL1-209ENST00000444508 RPIAP49247 311 aa17.3■□□□□ 0.36
SMARCAL1-209ENST00000444508 MSLNQ13421 630 aaPredicted RBP17.3■□□□□ 0.36
SMARCAL1-209ENST00000444508 ITGA9Q13797 1035 aa17.3■□□□□ 0.36
SMARCAL1-209ENST00000444508 SEPT6Q14141 434 aa17.3■□□□□ 0.36
SMARCAL1-209ENST00000444508 POU6F1Q14863 301 aa17.3■□□□□ 0.36
SMARCAL1-209ENST00000444508 CYP1B1Q16678 543 aa17.3■□□□□ 0.36
SMARCAL1-209ENST00000444508 ATP13A5Q4VNC0 1218 aa17.3■□□□□ 0.36
SMARCAL1-209ENST00000444508 PAPD7Q5XG87 772 aaKnown RBP17.3■□□□□ 0.36
SMARCAL1-209ENST00000444508 TTC27Q6P3X3 843 aa17.3■□□□□ 0.36
SMARCAL1-209ENST00000444508 CCDC137Q6PK04 289 aaKnown RBP17.3■□□□□ 0.36
SMARCAL1-209ENST00000444508 SLCO6A1Q86UG4 719 aa17.3■□□□□ 0.36
SMARCAL1-209ENST00000444508 OR52K1Q8NGK4 314 aa17.3■□□□□ 0.36
SMARCAL1-209ENST00000444508 GDAP1Q8TB36 358 aa17.3■□□□□ 0.36
SMARCAL1-209ENST00000444508 GRK7Q8WTQ7 553 aa17.3■□□□□ 0.36
SMARCAL1-209ENST00000444508 SCARF2Q96GP6 870 aaPredicted RBP17.3■□□□□ 0.36
SMARCAL1-209ENST00000444508 VPS35Q96QK1 796 aa17.3■□□□□ 0.36
SMARCAL1-209ENST00000444508 RMI1Q9H9A7 625 aa17.3■□□□□ 0.36
SMARCAL1-209ENST00000444508 EIF2B3Q9NR50 452 aaKnown RBP17.3■□□□□ 0.36
SMARCAL1-209ENST00000444508 PIH1D1Q9NWS0 290 aaKnown RBP17.3■□□□□ 0.36
SMARCAL1-209ENST00000444508 TOR4AQ9NXH8 423 aa17.3■□□□□ 0.36
SMARCAL1-209ENST00000444508 ZNHIT2Q9UHR6 403 aa17.3■□□□□ 0.36
SMARCAL1-209ENST00000444508 APPL1Q9UKG1 709 aa17.3■□□□□ 0.36
SMARCAL1-209ENST00000444508 GPR34Q9UPC5 381 aa17.3■□□□□ 0.36
SMARCAL1-209ENST00000444508 PCDHGA1Q9Y5H4 931 aa17.3■□□□□ 0.36
SMARCAL1-209ENST00000444508 KRT14P02533 472 aa17.29■□□□□ 0.36
SMARCAL1-209ENST00000444508 FUCA1P04066 466 aa17.29■□□□□ 0.36
SMARCAL1-209ENST00000444508 CDK4P11802 303 aa17.29■□□□□ 0.36
SMARCAL1-209ENST00000444508 ACP1P24666 158 aa17.29■□□□□ 0.36
SMARCAL1-209ENST00000444508 ADCY8P40145 1251 aa17.29■□□□□ 0.36
SMARCAL1-209ENST00000444508 HADHAP40939 763 aa17.29■□□□□ 0.36
SMARCAL1-209ENST00000444508 FNTAP49354 379 aa17.29■□□□□ 0.36
SMARCAL1-209ENST00000444508 ACADVLP49748 655 aa17.29■□□□□ 0.36
SMARCAL1-209ENST00000444508 ILKQ13418 452 aa17.29■□□□□ 0.36
SMARCAL1-209ENST00000444508 PEX6Q13608 980 aa17.29■□□□□ 0.36
SMARCAL1-209ENST00000444508 LAMB3Q13751 1172 aa17.29■□□□□ 0.36
SMARCAL1-209ENST00000444508 PTPRCAPQ14761 206 aa17.29■□□□□ 0.36
SMARCAL1-209ENST00000444508 NR0B2Q15466 257 aa17.29■□□□□ 0.36
SMARCAL1-209ENST00000444508 TRIP13Q15645 432 aaPredicted RBP17.29■□□□□ 0.36
SMARCAL1-209ENST00000444508 CHRNA6Q15825 494 aa17.29■□□□□ 0.36
SMARCAL1-209ENST00000444508 PYCR3Q53H96 274 aa17.29■□□□□ 0.36
SMARCAL1-209ENST00000444508 C17orf53Q8N3J3 647 aaPredicted RBP17.29■□□□□ 0.36
SMARCAL1-209ENST00000444508 GPBAR1Q8TDU6 330 aa17.29■□□□□ 0.36
SMARCAL1-209ENST00000444508 PTCD2Q8WV60 388 aaKnown RBP17.29■□□□□ 0.36
SMARCAL1-209ENST00000444508 ADAMTS14Q8WXS8 1223 aa17.29■□□□□ 0.36
SMARCAL1-209ENST00000444508 CAPZA3Q96KX2 299 aa17.29■□□□□ 0.36
SMARCAL1-209ENST00000444508 C19orf43Q9BQ61 176 aa17.29■□□□□ 0.36
SMARCAL1-209ENST00000444508 BOCQ9BWV1 1114 aa17.29■□□□□ 0.36
SMARCAL1-209ENST00000444508 OR2AG1Q9H205 316 aa17.29■□□□□ 0.36
SMARCAL1-209ENST00000444508 TRIM39Q9HCM9 518 aa17.29■□□□□ 0.36
SMARCAL1-209ENST00000444508 ARFGAP3Q9NP61 516 aa17.29■□□□□ 0.36
SMARCAL1-209ENST00000444508 FKBPLQ9UIM3 349 aa17.29■□□□□ 0.36
SMARCAL1-209ENST00000444508 KCTD3Q9Y597 815 aa17.29■□□□□ 0.36
SMARCAL1-209ENST00000444508 GPR89AB7ZAQ6 455 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms