RNA–Protein interactions for RNA: ENST00000444415.7

TRAF4-205, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-205ENST00000444415 FSD1LQ9BXM9 530 aa21.67■■□□□ 1.06
TRAF4-205ENST00000444415 ARFGAP3Q9NP61 516 aa21.67■■□□□ 1.06
TRAF4-205ENST00000444415 SPATS2LQ9NUQ6 558 aaKnown RBP21.67■■□□□ 1.06
TRAF4-205ENST00000444415 TRNAU1APQ9NX07 287 aaKnown RBP21.67■■□□□ 1.06
TRAF4-205ENST00000444415 IL17CQ9P0M4 197 aa21.67■■□□□ 1.06
TRAF4-205ENST00000444415 GPR34Q9UPC5 381 aa21.67■■□□□ 1.06
TRAF4-205ENST00000444415 GPR39O43194 453 aa21.66■■□□□ 1.06
TRAF4-205ENST00000444415 BUD23O43709 281 aaKnown RBP21.66■■□□□ 1.06
TRAF4-205ENST00000444415 USP12O75317 370 aa21.66■■□□□ 1.06
TRAF4-205ENST00000444415 ADCY8P40145 1251 aa21.66■■□□□ 1.06
TRAF4-205ENST00000444415 CTBSQ01459 385 aa21.66■■□□□ 1.06
TRAF4-205ENST00000444415 SPARCL1Q14515 664 aa21.66■■□□□ 1.06
TRAF4-205ENST00000444415 PTPRCAPQ14761 206 aa21.66■■□□□ 1.06
TRAF4-205ENST00000444415 ZNF648Q5T619 568 aaPredicted RBP21.66■■□□□ 1.06
TRAF4-205ENST00000444415 CDCP2Q5VXM1 449 aa21.66■■□□□ 1.06
TRAF4-205ENST00000444415 CCDC70Q6NSX1 233 aa21.66■■□□□ 1.06
TRAF4-205ENST00000444415 OGFOD3Q6PK18 319 aa21.66■■□□□ 1.06
TRAF4-205ENST00000444415 MARK2Q7KZI7 788 aaKnown RBP21.66■■□□□ 1.06
TRAF4-205ENST00000444415 TAF8Q7Z7C8 310 aa21.66■■□□□ 1.06
TRAF4-205ENST00000444415 TRAM1L1Q8N609 369 aa21.66■■□□□ 1.06
TRAF4-205ENST00000444415 BLOC1S5Q8TDH9 187 aa21.66■■□□□ 1.06
TRAF4-205ENST00000444415 C1orf54Q8WWF1 131 aa21.66■■□□□ 1.06
TRAF4-205ENST00000444415 KIF26BQ2KJY2 2108 aa21.66■■□□□ 1.06
TRAF4-205ENST00000444415 UNC13CQ8NB66 2214 aa21.66■■□□□ 1.06
TRAF4-205ENST00000444415 CPED1A4D0V7 1026 aa21.65■■□□□ 1.06
TRAF4-205ENST00000444415 OPA1O60313 960 aa21.65■■□□□ 1.06
TRAF4-205ENST00000444415 STK10O94804 968 aaKnown RBP21.65■■□□□ 1.06
TRAF4-205ENST00000444415 PTMAP06454 111 aaKnown RBP21.65■■□□□ 1.06
TRAF4-205ENST00000444415 CDK4P11802 303 aa21.65■■□□□ 1.06
TRAF4-205ENST00000444415 KHDC1Q4VXA5 237 aaKnown RBP21.65■■□□□ 1.06
TRAF4-205ENST00000444415 GLT6D1Q7Z4J2 308 aa21.65■■□□□ 1.06
TRAF4-205ENST00000444415 PRUNE1Q86TP1 453 aa21.65■■□□□ 1.06
TRAF4-205ENST00000444415 GLIS1Q8NBF1 620 aa21.65■■□□□ 1.06
TRAF4-205ENST00000444415 FERMT1Q9BQL6 677 aa21.65■■□□□ 1.06
TRAF4-205ENST00000444415 SPATA16Q9BXB7 569 aa21.65■■□□□ 1.06
TRAF4-205ENST00000444415 TRABDQ9H4I3 376 aa21.65■■□□□ 1.06
TRAF4-205ENST00000444415 IL26Q9NPH9 171 aa21.65■■□□□ 1.06
TRAF4-205ENST00000444415 VPS18Q9P253 973 aa21.65■■□□□ 1.06
TRAF4-205ENST00000444415 PADI4Q9UM07 663 aa21.65■■□□□ 1.06
TRAF4-205ENST00000444415 DOLKQ9UPQ8 538 aa21.65■■□□□ 1.06
TRAF4-205ENST00000444415 AAR2Q9Y312 384 aaKnown RBP21.65■■□□□ 1.06
TRAF4-205ENST00000444415 PRKAB1Q9Y478 270 aa21.65■■□□□ 1.06
TRAF4-205ENST00000444415 DUSP3P51452 185 aaPredicted RBP21.64■■□□□ 1.06
TRAF4-205ENST00000444415 C17orf82Q86X59 251 aaPredicted RBP21.64■■□□□ 1.06
TRAF4-205ENST00000444415 DCBLD1Q8N8Z6 715 aa21.64■■□□□ 1.06
TRAF4-205ENST00000444415 FAM46DQ8NEK8 389 aa21.64■■□□□ 1.06
TRAF4-205ENST00000444415 PLEKHG4BQ96PX9 1271 aa21.64■■□□□ 1.06
TRAF4-205ENST00000444415 OR2M4Q96R27 311 aa21.64■■□□□ 1.06
TRAF4-205ENST00000444415 SRPK1Q96SB4 655 aaKnown RBP21.64■■□□□ 1.06
TRAF4-205ENST00000444415 ZSCAN5AQ9BUG6 496 aa21.64■■□□□ 1.06
TRAF4-205ENST00000444415 CDH19Q9H159 772 aa21.64■■□□□ 1.06
TRAF4-205ENST00000444415 NCKIPSDQ9NZQ3 722 aa21.64■■□□□ 1.06
TRAF4-205ENST00000444415 GULP1Q9UBP9 304 aa21.64■■□□□ 1.06
TRAF4-205ENST00000444415 ARL5AQ9Y689 179 aa21.64■■□□□ 1.06
TRAF4-205ENST00000444415 ACACAQ13085 2346 aa21.64■■□□□ 1.06
TRAF4-205ENST00000444415 PROS1P07225 676 aa21.64■■□□□ 1.05
TRAF4-205ENST00000444415 CXCR5P32302 372 aa21.64■■□□□ 1.05
TRAF4-205ENST00000444415 E2F1Q01094 437 aa21.64■■□□□ 1.05
TRAF4-205ENST00000444415 TARDBPQ13148 414 aaKnown RBP eCLIP21.64■■□□□ 1.05
TRAF4-205ENST00000444415 PARP6Q2NL67 630 aa21.64■■□□□ 1.05
TRAF4-205ENST00000444415 ATP13A5Q4VNC0 1218 aa21.64■■□□□ 1.05
TRAF4-205ENST00000444415 ZNF569Q5MCW4 686 aa21.64■■□□□ 1.05
TRAF4-205ENST00000444415 MICALCLQ6ZW33 695 aa21.64■■□□□ 1.05
TRAF4-205ENST00000444415 PATE1Q8WXA2 126 aa21.64■■□□□ 1.05
TRAF4-205ENST00000444415 GLYATL1Q969I3 302 aa21.64■■□□□ 1.05
TRAF4-205ENST00000444415 ARNT2Q9HBZ2 717 aa21.64■■□□□ 1.05
TRAF4-205ENST00000444415 HACD3Q9P035 362 aa21.64■■□□□ 1.05
TRAF4-205ENST00000444415 TAAR2Q9P1P5 351 aa21.64■■□□□ 1.05
TRAF4-205ENST00000444415 ATXN10Q9UBB4 475 aa21.64■■□□□ 1.05
TRAF4-205ENST00000444415 KCTD3Q9Y597 815 aa21.64■■□□□ 1.05
TRAF4-205ENST00000444415 ANKRD11Q6UB99 2663 aaPredicted RBP21.63■■□□□ 1.05
TRAF4-205ENST00000444415 B4DGG1 531 aa21.63■■□□□ 1.05
TRAF4-205ENST00000444415 NRDCO43847 1150 aa21.63■■□□□ 1.05
TRAF4-205ENST00000444415 HLTFQ14527 1009 aaKnown RBP eCLIP21.63■■□□□ 1.05
TRAF4-205ENST00000444415 KCTD19Q17RG1 926 aaPredicted RBP21.63■■□□□ 1.05
TRAF4-205ENST00000444415 PDPK2PQ6A1A2 396 aa21.63■■□□□ 1.05
TRAF4-205ENST00000444415 SLC30A9Q6PML9 568 aa21.63■■□□□ 1.05
TRAF4-205ENST00000444415 ARHGEF18Q6ZSZ5 1173 aa21.63■■□□□ 1.05
TRAF4-205ENST00000444415 ADGRG6Q86SQ4 1221 aa21.63■■□□□ 1.05
TRAF4-205ENST00000444415 TAB3Q8N5C8 712 aaPredicted RBP21.63■■□□□ 1.05
TRAF4-205ENST00000444415 SCG3Q8WXD2 468 aaKnown RBP21.63■■□□□ 1.05
TRAF4-205ENST00000444415 TBL1YQ9BQ87 522 aa21.63■■□□□ 1.05
TRAF4-205ENST00000444415 MTX2O75431 263 aa21.62■■□□□ 1.05
TRAF4-205ENST00000444415 ZNF189O75820 626 aaPredicted RBP21.62■■□□□ 1.05
TRAF4-205ENST00000444415 ASMTLO95671 621 aa21.62■■□□□ 1.05
TRAF4-205ENST00000444415 EML2O95834 649 aa21.62■■□□□ 1.05
TRAF4-205ENST00000444415 ETS1P14921 441 aa21.62■■□□□ 1.05
TRAF4-205ENST00000444415 ZNF8P17098 575 aaPredicted RBP21.62■■□□□ 1.05
TRAF4-205ENST00000444415 PDX1P52945 283 aa21.62■■□□□ 1.05
TRAF4-205ENST00000444415 ILF3Q12906 894 aaKnown RBP eCLIP21.62■■□□□ 1.05
TRAF4-205ENST00000444415 SNX1Q13596 522 aa21.62■■□□□ 1.05
TRAF4-205ENST00000444415 PRPSAP1Q14558 356 aa21.62■■□□□ 1.05
TRAF4-205ENST00000444415 P3H1Q32P28 736 aa21.62■■□□□ 1.05
TRAF4-205ENST00000444415 NAGSQ8N159 534 aa21.62■■□□□ 1.05
TRAF4-205ENST00000444415 CACTIN-AS1Q8N1I8 211 aa21.62■■□□□ 1.05
TRAF4-205ENST00000444415 KDF1Q8NAX2 398 aaPredicted RBP21.62■■□□□ 1.05
TRAF4-205ENST00000444415 GLMNQ92990 594 aa21.62■■□□□ 1.05
TRAF4-205ENST00000444415 CCDC74AQ96AQ1 378 aa21.62■■□□□ 1.05
TRAF4-205ENST00000444415 VPS35Q96QK1 796 aa21.62■■□□□ 1.05
TRAF4-205ENST00000444415 CCDC3Q9BQI4 270 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms