RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 PMS2P2O95744 297 aa4.85□□□□□ -1.63
PFDN4-202ENST00000441080 AFPP02771 609 aaKnown RBP4.85□□□□□ -1.63
PFDN4-202ENST00000441080 HIST1H2ABP04908 130 aa4.85□□□□□ -1.63
PFDN4-202ENST00000441080 LINC00271P0C7V0 271 aa4.85□□□□□ -1.63
PFDN4-202ENST00000441080 ACTN1P12814 892 aa4.85□□□□□ -1.63
PFDN4-202ENST00000441080 ANXA7P20073 488 aaKnown RBP4.85□□□□□ -1.63
PFDN4-202ENST00000441080 HIST1H2ADP20671 130 aa4.85□□□□□ -1.63
PFDN4-202ENST00000441080 FASLGP48023 281 aa4.85□□□□□ -1.63
PFDN4-202ENST00000441080 CDC16Q13042 620 aa4.85□□□□□ -1.63
PFDN4-202ENST00000441080 SNTA1Q13424 505 aa4.85□□□□□ -1.63
PFDN4-202ENST00000441080 CUL4AQ13619 759 aa4.85□□□□□ -1.63
PFDN4-202ENST00000441080 PDE1CQ14123 709 aaPredicted RBP4.85□□□□□ -1.63
PFDN4-202ENST00000441080 KEAP1Q14145 624 aa4.85□□□□□ -1.63
PFDN4-202ENST00000441080 WTAPQ15007 396 aa4.85□□□□□ -1.63
PFDN4-202ENST00000441080 DUSP28Q4G0W2 176 aa4.85□□□□□ -1.63
PFDN4-202ENST00000441080 PMS2CLQ68D20 193 aa4.85□□□□□ -1.63
PFDN4-202ENST00000441080 ZNF324BQ6AW86 544 aaPredicted RBP4.85□□□□□ -1.63
PFDN4-202ENST00000441080 CFAP77Q6ZQR2 320 aa4.85□□□□□ -1.63
PFDN4-202ENST00000441080 HIST3H2AQ7L7L0 130 aa4.85□□□□□ -1.63
PFDN4-202ENST00000441080 SZRD1Q7Z422 152 aa4.85□□□□□ -1.63
PFDN4-202ENST00000441080 TSPAN33Q86UF1 283 aa4.85□□□□□ -1.63
PFDN4-202ENST00000441080 LILRB1Q8NHL6 650 aaPredicted RBP4.85□□□□□ -1.63
PFDN4-202ENST00000441080 TAAR8Q969N4 342 aa4.85□□□□□ -1.63
PFDN4-202ENST00000441080 RHBDF1Q96CC6 855 aa4.85□□□□□ -1.63
PFDN4-202ENST00000441080 EGLN2Q96KS0 407 aa4.85□□□□□ -1.63
PFDN4-202ENST00000441080 ZNF385AQ96PM9 386 aaKnown RBP4.85□□□□□ -1.63
PFDN4-202ENST00000441080 MTERF1Q99551 399 aaKnown RBP4.85□□□□□ -1.63
PFDN4-202ENST00000441080 SIL1Q9H173 461 aa4.85□□□□□ -1.63
PFDN4-202ENST00000441080 MTMR10Q9NXD2 777 aa4.85□□□□□ -1.63
PFDN4-202ENST00000441080 NSMCE4AQ9NXX6 385 aa4.85□□□□□ -1.63
PFDN4-202ENST00000441080 ADD3Q9UEY8 706 aaKnown RBP4.85□□□□□ -1.63
PFDN4-202ENST00000441080 CDRT15L2A8MXV6 281 aa4.84□□□□□ -1.63
PFDN4-202ENST00000441080 TPPPO94811 219 aa4.84□□□□□ -1.63
PFDN4-202ENST00000441080 ICAM1P05362 532 aa4.84□□□□□ -1.63
PFDN4-202ENST00000441080 TKTP29401 623 aaKnown RBP4.84□□□□□ -1.63
PFDN4-202ENST00000441080 HOXA13P31271 388 aaPredicted RBP4.84□□□□□ -1.63
PFDN4-202ENST00000441080 TMPOP42166 694 aaKnown RBP4.84□□□□□ -1.63
PFDN4-202ENST00000441080 SREBF2Q12772 1141 aa4.84□□□□□ -1.63
PFDN4-202ENST00000441080 CHAF1BQ13112 559 aa4.84□□□□□ -1.63
PFDN4-202ENST00000441080 IRF3Q14653 427 aa4.84□□□□□ -1.63
PFDN4-202ENST00000441080 ASIC2Q16515 512 aa4.84□□□□□ -1.63
PFDN4-202ENST00000441080 DECR1Q16698 335 aa4.84□□□□□ -1.63
PFDN4-202ENST00000441080 IZUMO4Q1ZYL8 232 aa4.84□□□□□ -1.63
PFDN4-202ENST00000441080 KIF19Q2TAC6 998 aa4.84□□□□□ -1.63
PFDN4-202ENST00000441080 RILPL1Q5EBL4 403 aa4.84□□□□□ -1.63
PFDN4-202ENST00000441080 C9orf57Q5W0N0 161 aa4.84□□□□□ -1.63
PFDN4-202ENST00000441080 CFAP161Q6P656 301 aa4.84□□□□□ -1.63
PFDN4-202ENST00000441080 CLEC17AQ6ZS10 378 aa4.84□□□□□ -1.63
PFDN4-202ENST00000441080 RBM23Q86U06 439 aaKnown RBP4.84□□□□□ -1.63
PFDN4-202ENST00000441080 C17orf53Q8N3J3 647 aaPredicted RBP4.84□□□□□ -1.63
PFDN4-202ENST00000441080 SMRP1Q8NCR6 262 aa4.84□□□□□ -1.63
PFDN4-202ENST00000441080 SPATA22Q8NHS9 363 aa4.84□□□□□ -1.63
PFDN4-202ENST00000441080 HMGCLL1Q8TB92 370 aa4.84□□□□□ -1.63
PFDN4-202ENST00000441080 MOAP1Q96BY2 351 aa4.84□□□□□ -1.63
PFDN4-202ENST00000441080 NSUN4Q96CB9 384 aaKnown RBP4.84□□□□□ -1.63
PFDN4-202ENST00000441080 BICD1Q96G01 975 aa4.84□□□□□ -1.63
PFDN4-202ENST00000441080 TMEM19Q96HH6 336 aa4.84□□□□□ -1.63
PFDN4-202ENST00000441080 MAGIXQ9H6Y5 334 aa4.84□□□□□ -1.63
PFDN4-202ENST00000441080 GAREM1Q9H706 876 aa4.84□□□□□ -1.63
PFDN4-202ENST00000441080 EPB41L5Q9HCM4 733 aa4.84□□□□□ -1.63
PFDN4-202ENST00000441080 FBXL2Q9UKC9 423 aa4.84□□□□□ -1.63
PFDN4-202ENST00000441080 NENFQ9UMX5 172 aa4.84□□□□□ -1.63
PFDN4-202ENST00000441080 VDAC3Q9Y277 283 aa4.84□□□□□ -1.63
PFDN4-202ENST00000441080 AMDHD2Q9Y303 409 aa4.84□□□□□ -1.63
PFDN4-202ENST00000441080 PLSCR5A0PG75 271 aa4.83□□□□□ -1.64
PFDN4-202ENST00000441080 EIF4E1BA6NMX2 242 aaKnown RBP4.83□□□□□ -1.64
PFDN4-202ENST00000441080 MAP2K7O14733 419 aa4.83□□□□□ -1.64
PFDN4-202ENST00000441080 DDNO94850 711 aaPredicted RBP4.83□□□□□ -1.64
PFDN4-202ENST00000441080 KCNK5O95279 499 aa4.83□□□□□ -1.64
PFDN4-202ENST00000441080 PPP1R3DO95685 299 aa4.83□□□□□ -1.64
PFDN4-202ENST00000441080 FGF3P11487 239 aaPredicted RBP4.83□□□□□ -1.64
PFDN4-202ENST00000441080 S1PR1P21453 382 aa4.83□□□□□ -1.64
PFDN4-202ENST00000441080 PON1P27169 355 aa4.83□□□□□ -1.64
PFDN4-202ENST00000441080 ACADLP28330 430 aa4.83□□□□□ -1.64
PFDN4-202ENST00000441080 APOBEC1P41238 236 aaKnown RBP4.83□□□□□ -1.64
PFDN4-202ENST00000441080 GPR143P51810 404 aa4.83□□□□□ -1.64
PFDN4-202ENST00000441080 SNX16P57768 344 aa4.83□□□□□ -1.64
PFDN4-202ENST00000441080 BRWD1-AS2P59051 145 aa4.83□□□□□ -1.64
PFDN4-202ENST00000441080 PDE1BQ01064 536 aa4.83□□□□□ -1.64
PFDN4-202ENST00000441080 ACVR2BQ13705 512 aa4.83□□□□□ -1.64
PFDN4-202ENST00000441080 PLEKHS1Q5SXH7 462 aa4.83□□□□□ -1.64
PFDN4-202ENST00000441080 KIAA1161Q6NSJ0 714 aa4.83□□□□□ -1.64
PFDN4-202ENST00000441080 BRAT1Q6PJG6 821 aa4.83□□□□□ -1.64
PFDN4-202ENST00000441080 MEPCEQ7L2J0 689 aaKnown RBP4.83□□□□□ -1.64
PFDN4-202ENST00000441080 C16orf82Q7Z2V1 217 aa4.83□□□□□ -1.64
PFDN4-202ENST00000441080 ARMC9Q7Z3E5 817 aa4.83□□□□□ -1.64
PFDN4-202ENST00000441080 GPR180Q86V85 440 aa4.83□□□□□ -1.64
PFDN4-202ENST00000441080 NRROSQ86YC3 692 aa4.83□□□□□ -1.64
PFDN4-202ENST00000441080 ZNF34Q8IZ26 560 aa4.83□□□□□ -1.64
PFDN4-202ENST00000441080 TMTC2Q8N394 836 aa4.83□□□□□ -1.64
PFDN4-202ENST00000441080 HM13Q8TCT9 377 aa4.83□□□□□ -1.64
PFDN4-202ENST00000441080 DUSP19Q8WTR2 217 aa4.83□□□□□ -1.64
PFDN4-202ENST00000441080 QRFPRQ96P65 431 aa4.83□□□□□ -1.64
PFDN4-202ENST00000441080 NUDCD1Q96RS6 583 aa4.83□□□□□ -1.64
PFDN4-202ENST00000441080 GAD1Q99259 594 aa4.83□□□□□ -1.64
PFDN4-202ENST00000441080 SRSF8Q9BRL6 282 aaKnown RBP4.83□□□□□ -1.64
PFDN4-202ENST00000441080 CCDC68Q9H2F9 335 aa4.83□□□□□ -1.64
PFDN4-202ENST00000441080 KCNS2Q9ULS6 477 aa4.83□□□□□ -1.64
PFDN4-202ENST00000441080 PADI3Q9ULW8 664 aa4.83□□□□□ -1.64
PFDN4-202ENST00000441080 KLHL20Q9Y2M5 609 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms