RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 WDR24Q96S15 920 aa10.39□□□□□ -0.75
MCF2L-216ENST00000439475 CCDC3Q9BQI4 270 aa10.39□□□□□ -0.75
MCF2L-216ENST00000439475 HERPUD2Q9BSE4 406 aa10.39□□□□□ -0.75
MCF2L-216ENST00000439475 FICDQ9BVA6 458 aa10.39□□□□□ -0.75
MCF2L-216ENST00000439475 CARD9Q9H257 536 aa10.39□□□□□ -0.75
MCF2L-216ENST00000439475 C10orf88Q9H8K7 445 aa10.39□□□□□ -0.75
MCF2L-216ENST00000439475 TRIM39Q9HCM9 518 aa10.39□□□□□ -0.75
MCF2L-216ENST00000439475 ZNHIT2Q9UHR6 403 aa10.39□□□□□ -0.75
MCF2L-216ENST00000439475 U3KQA8 63 aa10.39□□□□□ -0.75
MCF2L-216ENST00000439475 FRYLO94915 3013 aa10.38□□□□□ -0.75
MCF2L-216ENST00000439475 DNAH14Q0VDD8 3507 aa10.38□□□□□ -0.75
MCF2L-216ENST00000439475 RHPN2P1A8MT19 583 aa10.38□□□□□ -0.75
MCF2L-216ENST00000439475 FADS2P1A8MWK0 482 aa10.38□□□□□ -0.75
MCF2L-216ENST00000439475 B4DGG1 531 aa10.38□□□□□ -0.75
MCF2L-216ENST00000439475 F5H423 210 aaPredicted RBP10.38□□□□□ -0.75
MCF2L-216ENST00000439475 GRID2O43424 1007 aa10.38□□□□□ -0.75
MCF2L-216ENST00000439475 VEGFDO43915 354 aa10.38□□□□□ -0.75
MCF2L-216ENST00000439475 NUAK1O60285 661 aa10.38□□□□□ -0.75
MCF2L-216ENST00000439475 CRTAMO95727 393 aa10.38□□□□□ -0.75
MCF2L-216ENST00000439475 SLC2A4P14672 509 aa10.38□□□□□ -0.75
MCF2L-216ENST00000439475 BPIP17213 487 aa10.38□□□□□ -0.75
MCF2L-216ENST00000439475 LPOP22079 712 aaPredicted RBP10.38□□□□□ -0.75
MCF2L-216ENST00000439475 PSMB4P28070 264 aa10.38□□□□□ -0.75
MCF2L-216ENST00000439475 SPAM1P38567 509 aa10.38□□□□□ -0.75
MCF2L-216ENST00000439475 ACTR1BP42025 376 aa10.38□□□□□ -0.75
MCF2L-216ENST00000439475 ACTR1AP61163 376 aa10.38□□□□□ -0.75
MCF2L-216ENST00000439475 CCZ1BP86790 482 aa10.38□□□□□ -0.75
MCF2L-216ENST00000439475 CCZ1P86791 482 aaPredicted RBP10.38□□□□□ -0.75
MCF2L-216ENST00000439475 CTBSQ01459 385 aa10.38□□□□□ -0.75
MCF2L-216ENST00000439475 KLF1Q13351 362 aaPredicted RBP10.38□□□□□ -0.75
MCF2L-216ENST00000439475 CAMK2BQ13554 666 aa10.38□□□□□ -0.75
MCF2L-216ENST00000439475 ITGA9Q13797 1035 aa10.38□□□□□ -0.75
MCF2L-216ENST00000439475 GTF2H3Q13889 308 aa10.38□□□□□ -0.75
MCF2L-216ENST00000439475 CDCP2Q5VXM1 449 aa10.38□□□□□ -0.75
MCF2L-216ENST00000439475 SLC30A9Q6PML9 568 aa10.38□□□□□ -0.75
MCF2L-216ENST00000439475 RANBP10Q6VN20 620 aa10.38□□□□□ -0.75
MCF2L-216ENST00000439475 RBM44Q6ZP01 1051 aaKnown RBP10.38□□□□□ -0.75
MCF2L-216ENST00000439475 CHST15Q7LFX5 561 aaPredicted RBP10.38□□□□□ -0.75
MCF2L-216ENST00000439475 SLC13A5Q86YT5 568 aaPredicted RBP10.38□□□□□ -0.75
MCF2L-216ENST00000439475 PHYKPLQ8IUZ5 450 aa10.38□□□□□ -0.75
MCF2L-216ENST00000439475 GPR26Q8NDV2 337 aa10.38□□□□□ -0.75
MCF2L-216ENST00000439475 CCL4L1Q8NHW4 92 aa10.38□□□□□ -0.75
MCF2L-216ENST00000439475 GDAP1Q8TB36 358 aa10.38□□□□□ -0.75
MCF2L-216ENST00000439475 GLYATL1Q969I3 302 aa10.38□□□□□ -0.75
MCF2L-216ENST00000439475 FAM118BQ9BPY3 351 aa10.38□□□□□ -0.75
MCF2L-216ENST00000439475 STN1Q9H668 368 aaKnown RBP10.38□□□□□ -0.75
MCF2L-216ENST00000439475 SYNDIG1Q9H7V2 258 aa10.38□□□□□ -0.75
MCF2L-216ENST00000439475 BPIFA1Q9NP55 256 aa10.38□□□□□ -0.75
MCF2L-216ENST00000439475 IL17CQ9P0M4 197 aa10.38□□□□□ -0.75
MCF2L-216ENST00000439475 TAAR2Q9P1P5 351 aa10.38□□□□□ -0.75
MCF2L-216ENST00000439475 LRIT1Q9P2V4 623 aa10.38□□□□□ -0.75
MCF2L-216ENST00000439475 DKK4Q9UBT3 224 aa10.38□□□□□ -0.75
MCF2L-216ENST00000439475 ZMIZ1Q9ULJ6 1067 aa10.38□□□□□ -0.75
MCF2L-216ENST00000439475 CNOT6Q9ULM6 557 aaKnown RBP10.38□□□□□ -0.75
MCF2L-216ENST00000439475 ZNF148Q9UQR1 794 aa10.38□□□□□ -0.75
MCF2L-216ENST00000439475 LRP4O75096 1905 aa10.38□□□□□ -0.75
MCF2L-216ENST00000439475 MYLKQ15746 1914 aa10.37□□□□□ -0.75
MCF2L-216ENST00000439475 ARHGEF17Q96PE2 2063 aaPredicted RBP10.37□□□□□ -0.75
MCF2L-216ENST00000439475 OR5K4A6NMS3 321 aa10.37□□□□□ -0.75
MCF2L-216ENST00000439475 ZSCAN12O43309 604 aa10.37□□□□□ -0.75
MCF2L-216ENST00000439475 NUDT21O43809 227 aaKnown RBP10.37□□□□□ -0.75
MCF2L-216ENST00000439475 NOBOXO60393 691 aa10.37□□□□□ -0.75
MCF2L-216ENST00000439475 KCNJ13O60928 360 aa10.37□□□□□ -0.75
MCF2L-216ENST00000439475 CSO75390 466 aaKnown RBP10.37□□□□□ -0.75
MCF2L-216ENST00000439475 CDK14O94921 469 aa10.37□□□□□ -0.75
MCF2L-216ENST00000439475 GAS8O95995 478 aa10.37□□□□□ -0.75
MCF2L-216ENST00000439475 AGTP01019 485 aa10.37□□□□□ -0.75
MCF2L-216ENST00000439475 FUCA1P04066 466 aa10.37□□□□□ -0.75
MCF2L-216ENST00000439475 ATP1A1P05023 1023 aaKnown RBP10.37□□□□□ -0.75
MCF2L-216ENST00000439475 MSNP26038 577 aaKnown RBP10.37□□□□□ -0.75
MCF2L-216ENST00000439475 AK4P27144 223 aaPredicted RBP10.37□□□□□ -0.75
MCF2L-216ENST00000439475 CHRNA4P43681 627 aa10.37□□□□□ -0.75
MCF2L-216ENST00000439475 CYP4F3Q08477 520 aa10.37□□□□□ -0.75
MCF2L-216ENST00000439475 RTP5Q14D33 572 aa10.37□□□□□ -0.75
MCF2L-216ENST00000439475 TAF1AQ15573 450 aaPredicted RBP10.37□□□□□ -0.75
MCF2L-216ENST00000439475 PERM1Q5SV97 790 aa10.37□□□□□ -0.75
MCF2L-216ENST00000439475 KCTD16Q68DU8 428 aa10.37□□□□□ -0.75
MCF2L-216ENST00000439475 NYAP1Q6ZVC0 841 aa10.37□□□□□ -0.75
MCF2L-216ENST00000439475 TRIM74Q86UV6 250 aa10.37□□□□□ -0.75
MCF2L-216ENST00000439475 FAM71DQ8N9W8 422 aa10.37□□□□□ -0.75
MCF2L-216ENST00000439475 KYQ8NBH2 561 aa10.37□□□□□ -0.75
MCF2L-216ENST00000439475 SLC35B2Q8TB61 432 aa10.37□□□□□ -0.75
MCF2L-216ENST00000439475 CCDC74AQ96AQ1 378 aa10.37□□□□□ -0.75
MCF2L-216ENST00000439475 EID2BQ96D98 161 aa10.37□□□□□ -0.75
MCF2L-216ENST00000439475 TMEM74Q96NL1 305 aa10.37□□□□□ -0.75
MCF2L-216ENST00000439475 VPS35Q96QK1 796 aa10.37□□□□□ -0.75
MCF2L-216ENST00000439475 GFM1Q96RP9 751 aaKnown RBP10.37□□□□□ -0.75
MCF2L-216ENST00000439475 TBL1YQ9BQ87 522 aa10.37□□□□□ -0.75
MCF2L-216ENST00000439475 ZCCHC2Q9C0B9 1178 aaKnown RBP10.37□□□□□ -0.75
MCF2L-216ENST00000439475 LRRN3Q9H3W5 708 aa10.37□□□□□ -0.75
MCF2L-216ENST00000439475 SPATS2LQ9NUQ6 558 aaKnown RBP10.37□□□□□ -0.75
MCF2L-216ENST00000439475 ATXN10Q9UBB4 475 aa10.37□□□□□ -0.75
MCF2L-216ENST00000439475 APPL1Q9UKG1 709 aa10.37□□□□□ -0.75
MCF2L-216ENST00000439475 PPP2R2CQ9Y2T4 447 aa10.37□□□□□ -0.75
MCF2L-216ENST00000439475 SPO11Q9Y5K1 396 aa10.37□□□□□ -0.75
MCF2L-216ENST00000439475 ASXL3Q9C0F0 2248 aa10.37□□□□□ -0.75
MCF2L-216ENST00000439475 NCOR2Q9Y618 2525 aa10.36□□□□□ -0.75
MCF2L-216ENST00000439475 GLYATL1P3A0A0U1RQE8 302 aa10.36□□□□□ -0.75
MCF2L-216ENST00000439475 AURKAO14965 403 aa10.36□□□□□ -0.75
MCF2L-216ENST00000439475 KMOO15229 486 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms