RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 CRTC3Q6UUV7 619 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 UNC93AQ86WB7 457 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 CRYBG2Q8N1P7 616 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 Q8N9G6 341 aaPredicted RBP13.5□□□□□ -0.25
PCNX3-202ENST00000439247 PPHLN1Q8NEY8 458 aaKnown RBP13.5□□□□□ -0.25
PCNX3-202ENST00000439247 TWIST2Q8WVJ9 160 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 CASP10Q92851 521 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 BIRC7Q96CA5 298 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 ALOXE3Q9BYJ1 711 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 TRIM15Q9C019 465 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 TKTL2Q9H0I9 626 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 NTN4Q9HB63 628 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 KLQ9UEF7 1012 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 TRHDEQ9UKU6 1024 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 MKI67P46013 3256 aaKnown RBP13.5□□□□□ -0.25
PCNX3-202ENST00000439247 NOBOXO60393 691 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 GJA8P48165 433 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 VEGFBP49765 207 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 OR4D2P58180 307 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 CLCQ05315 142 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 SOX4Q06945 474 aaPredicted RBP13.5□□□□□ -0.25
PCNX3-202ENST00000439247 AGAP9Q5VTM2 703 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 KIAA0319Q5VV43 1072 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 PDZD4Q76G19 769 aaPredicted RBP13.5□□□□□ -0.25
PCNX3-202ENST00000439247 KIAA2013Q8IYS2 634 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 SPARTQ8N0X7 666 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 MIER2Q8N344 545 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 MINDY1Q8N5J2 469 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 B3GALNT2Q8NCR0 500 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 IL12RB2Q99665 862 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 HOPXQ9BPY8 73 aaPredicted RBP13.5□□□□□ -0.25
PCNX3-202ENST00000439247 MED10Q9BTT4 135 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 KLHL25Q9H0H3 589 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 EPS8L2Q9H6S3 715 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 SMURF2Q9HAU4 748 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 NDFIP2Q9NV92 336 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 GIN1Q9NXP7 522 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 AASSQ9UDR5 926 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 ANAPC2Q9UJX6 822 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 OAS3Q9Y6K5 1087 aaKnown RBP13.5□□□□□ -0.25
PCNX3-202ENST00000439247 PTGES3LE9PB15 166 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 INMTO95050 263 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 IMPDH1P20839 514 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 HRH2P25021 359 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 POU4F1Q01851 419 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 LAPTM5Q13571 262 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 KCNJ8Q15842 424 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 INAVAQ3KP66 663 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 SLC16A12Q6ZSM3 486 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 CLEC20AQ6ZU45 233 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 STK32CQ86UX6 486 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 DPF3Q92784 378 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 CCDC68Q9H2F9 335 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 RNF39Q9H2S5 420 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 GIT1Q9Y2X7 761 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 PCDHGA11Q9Y5H2 935 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 UBXN8O00124 270 aa13.49□□□□□ -0.25
PCNX3-202ENST00000439247 NKX2-5P52952 324 aaPredicted RBP13.49□□□□□ -0.25
PCNX3-202ENST00000439247 TRIM32Q13049 653 aa13.49□□□□□ -0.25
PCNX3-202ENST00000439247 AAK1Q2M2I8 961 aa13.49□□□□□ -0.25
PCNX3-202ENST00000439247 HECTD2Q5U5R9 776 aa13.49□□□□□ -0.25
PCNX3-202ENST00000439247 BROXQ5VW32 411 aa13.49□□□□□ -0.25
PCNX3-202ENST00000439247 ISCA2Q86U28 154 aa13.49□□□□□ -0.25
PCNX3-202ENST00000439247 PHYKPLQ8IUZ5 450 aa13.49□□□□□ -0.25
PCNX3-202ENST00000439247 SFRP1Q8N474 314 aa13.49□□□□□ -0.25
PCNX3-202ENST00000439247 DCBLD1Q8N8Z6 715 aa13.49□□□□□ -0.25
PCNX3-202ENST00000439247 FKBP10Q96AY3 582 aa13.49□□□□□ -0.25
PCNX3-202ENST00000439247 ITCHQ96J02 903 aa13.49□□□□□ -0.25
PCNX3-202ENST00000439247 DUSP16Q9BY84 665 aa13.49□□□□□ -0.25
PCNX3-202ENST00000439247 ABHD16BQ9H3Z7 469 aa13.49□□□□□ -0.25
PCNX3-202ENST00000439247 TMEM9Q9P0T7 183 aa13.49□□□□□ -0.25
PCNX3-202ENST00000439247 FBXW11Q9UKB1 542 aa13.49□□□□□ -0.25
PCNX3-202ENST00000439247 UTS2RQ9UKP6 389 aa13.49□□□□□ -0.25
PCNX3-202ENST00000439247 PCDHGA8Q9Y5G5 932 aa13.49□□□□□ -0.25
PCNX3-202ENST00000439247 RECQL4O94761 1208 aa13.49□□□□□ -0.25
PCNX3-202ENST00000439247 PABPC1P11940 636 aaKnown RBP13.49□□□□□ -0.25
PCNX3-202ENST00000439247 HOXA11P31270 313 aaPredicted RBP13.49□□□□□ -0.25
PCNX3-202ENST00000439247 PIGAP37287 484 aa13.49□□□□□ -0.25
PCNX3-202ENST00000439247 RAB15P59190 212 aa13.49□□□□□ -0.25
PCNX3-202ENST00000439247 ZBTB6Q15916 424 aa13.49□□□□□ -0.25
PCNX3-202ENST00000439247 PFKFB4Q16877 469 aa13.49□□□□□ -0.25
PCNX3-202ENST00000439247 PRR23BQ6ZRT6 265 aa13.49□□□□□ -0.25
PCNX3-202ENST00000439247 CLEC4FQ8N1N0 589 aa13.49□□□□□ -0.25
PCNX3-202ENST00000439247 FAM86B1Q8N7N1 296 aa13.49□□□□□ -0.25
PCNX3-202ENST00000439247 PTGR2Q8N8N7 351 aaPredicted RBP13.49□□□□□ -0.25
PCNX3-202ENST00000439247 PDPRQ8NCN5 879 aa13.49□□□□□ -0.25
PCNX3-202ENST00000439247 RAB2BQ8WUD1 216 aa13.49□□□□□ -0.25
PCNX3-202ENST00000439247 TMBIM1Q969X1 311 aa13.49□□□□□ -0.25
PCNX3-202ENST00000439247 SDCCAG3Q96C92 435 aa13.49□□□□□ -0.25
PCNX3-202ENST00000439247 TDRD1Q9BXT4 1180 aaKnown RBP13.49□□□□□ -0.25
PCNX3-202ENST00000439247 NFKBIZQ9BYH8 718 aa13.49□□□□□ -0.25
PCNX3-202ENST00000439247 SLC52A3Q9NQ40 469 aa13.49□□□□□ -0.25
PCNX3-202ENST00000439247 TREX1Q9NSU2 369 aa13.49□□□□□ -0.25
PCNX3-202ENST00000439247 SPATA7Q9P0W8 599 aa13.49□□□□□ -0.25
PCNX3-202ENST00000439247 POLG2Q9UHN1 485 aa13.49□□□□□ -0.25
PCNX3-202ENST00000439247 A6NL46 340 aa13.48□□□□□ -0.25
PCNX3-202ENST00000439247 ZNF865P0CJ78 1059 aaPredicted RBP13.48□□□□□ -0.25
PCNX3-202ENST00000439247 NPR3P17342 541 aa13.48□□□□□ -0.25
PCNX3-202ENST00000439247 CRHBPP24387 322 aa13.48□□□□□ -0.25
PCNX3-202ENST00000439247 SCNN1AP37088 669 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms