RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 CLYBLQ8N0X4 340 aa11.52□□□□□ -0.57
TRAPPC9-202ENST00000438773 PCDH20Q8N6Y1 951 aaKnown RBP11.52□□□□□ -0.57
TRAPPC9-202ENST00000438773 KLHL23Q8NBE8 558 aa11.52□□□□□ -0.57
TRAPPC9-202ENST00000438773 KHSRPQ92945 711 aaKnown RBP eCLIP11.52□□□□□ -0.57
TRAPPC9-202ENST00000438773 PPP1R16AQ96I34 528 aa11.52□□□□□ -0.57
TRAPPC9-202ENST00000438773 KCTD3Q9Y597 815 aa11.52□□□□□ -0.57
TRAPPC9-202ENST00000438773 BACE2Q9Y5Z0 518 aa11.52□□□□□ -0.57
TRAPPC9-202ENST00000438773 KIAA1217Q5T5P2 1943 aa11.52□□□□□ -0.57
TRAPPC9-202ENST00000438773 AZIN1O14977 448 aa11.52□□□□□ -0.57
TRAPPC9-202ENST00000438773 KDM1AO60341 852 aa11.52□□□□□ -0.57
TRAPPC9-202ENST00000438773 SEC22BO75396 215 aa11.52□□□□□ -0.57
TRAPPC9-202ENST00000438773 SLC25A14O95258 325 aaPredicted RBP11.52□□□□□ -0.57
TRAPPC9-202ENST00000438773 POP4O95707 220 aaKnown RBP11.52□□□□□ -0.57
TRAPPC9-202ENST00000438773 MLYCDO95822 493 aa11.52□□□□□ -0.57
TRAPPC9-202ENST00000438773 CBX2Q14781 532 aaPredicted RBP11.52□□□□□ -0.57
TRAPPC9-202ENST00000438773 TTC33Q6PID6 262 aaPredicted RBP11.52□□□□□ -0.57
TRAPPC9-202ENST00000438773 TREML1Q86YW5 311 aa11.52□□□□□ -0.57
TRAPPC9-202ENST00000438773 GALNT15Q8N3T1 639 aa11.52□□□□□ -0.57
TRAPPC9-202ENST00000438773 TCF12Q99081 682 aa11.52□□□□□ -0.57
TRAPPC9-202ENST00000438773 DPY30Q9C005 99 aa11.52□□□□□ -0.57
TRAPPC9-202ENST00000438773 SLC13A4Q9UKG4 626 aa11.52□□□□□ -0.57
TRAPPC9-202ENST00000438773 PDZK1P1A8MUH7 402 aa11.52□□□□□ -0.57
TRAPPC9-202ENST00000438773 FFAR3O14843 346 aa11.52□□□□□ -0.57
TRAPPC9-202ENST00000438773 GPR42O15529 346 aa11.52□□□□□ -0.57
TRAPPC9-202ENST00000438773 ELFN1P0C7U0 828 aa11.52□□□□□ -0.57
TRAPPC9-202ENST00000438773 COX4I1P13073 169 aa11.52□□□□□ -0.57
TRAPPC9-202ENST00000438773 HGFP14210 728 aa11.52□□□□□ -0.57
TRAPPC9-202ENST00000438773 CLEC4FQ8N1N0 589 aa11.52□□□□□ -0.57
TRAPPC9-202ENST00000438773 ZNF781Q8N8C0 355 aa11.52□□□□□ -0.57
TRAPPC9-202ENST00000438773 NRBF2Q96F24 287 aa11.52□□□□□ -0.57
TRAPPC9-202ENST00000438773 SPATA17Q96L03 361 aa11.52□□□□□ -0.57
TRAPPC9-202ENST00000438773 ZNF778Q96MU6 729 aa11.52□□□□□ -0.57
TRAPPC9-202ENST00000438773 KIFC1Q9BW19 673 aa11.52□□□□□ -0.57
TRAPPC9-202ENST00000438773 KLHL4Q9C0H6 718 aa11.52□□□□□ -0.57
TRAPPC9-202ENST00000438773 RBBP6Q7Z6E9 1792 aaKnown RBP11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 RGSL1A5PLK6 1076 aa11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 C2orf78A6NCI8 922 aa11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 IFRD1O00458 451 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 SH3BGRLO75368 114 aa11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 DLDP09622 509 aaKnown RBP11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 VCLP18206 1134 aa11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 GPR1P46091 355 aa11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 TMED10P49755 219 aaKnown RBP11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 TAF1AQ15573 450 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 RAB41Q5JT25 222 aa11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 ATAT1Q5SQI0 421 aa11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 RAET1GQ6H3X3 334 aa11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 ZNF598Q86UK7 904 aaKnown RBP11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 CSGALNACT1Q8TDX6 532 aa11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 SLC22A17Q8WUG5 538 aa11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 SKA1Q96BD8 255 aa11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 CASD1Q96PB1 797 aa11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 PAIP1Q9H074 479 aaKnown RBP11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 SMG9Q9H0W8 520 aaKnown RBP11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 DDX28Q9NUL7 540 aaKnown RBP11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 DYRK1BQ9Y463 629 aa11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 INPP4BO15327 924 aa11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 FKBP6O75344 327 aa11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 PCNAP12004 261 aa11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 EPB42P16452 691 aa11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 ME2P23368 584 aa11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 SPAM1P38567 509 aa11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 CACNG1Q06432 222 aa11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 MGAT3Q09327 533 aa11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 LRRC73Q5JTD7 316 aa11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 LYPLAL1Q5VWZ2 237 aa11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 TBC1D19Q8N5T2 526 aa11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 CNTD1Q8N815 330 aa11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 POF1BQ8WVV4 589 aa11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 FCRL3Q96P31 734 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 DUS2Q9NX74 493 aaKnown RBP11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 PAIP2BQ9ULR5 123 aaKnown RBP11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 USP3Q9Y6I4 520 aa11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 ANKRD12Q6UB98 2062 aa11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 TNS1Q9HBL0 1735 aaKnown RBP11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 GNG14A0A1W2PPG7 69 aa11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 NPEPPSL1A6NEC2 478 aa11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 PER2O15055 1255 aa11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 HNRNPRO43390 633 aaKnown RBP11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 STC2O76061 302 aa11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 IRF8Q02556 426 aa11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 DSC1Q08554 894 aa11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 PTPRCAPQ14761 206 aa11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 ACAP2Q15057 778 aa11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 DNAJC14Q6Y2X3 702 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 GPRIN3Q6ZVF9 776 aa11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 TAS1R1Q7RTX1 841 aa11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 DCBLD1Q8N8Z6 715 aa11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 RBM15BQ8NDT2 890 aaKnown RBP11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 MZB1Q8WU39 189 aa11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 JADE3Q92613 823 aa11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 MMADHCQ9H3L0 296 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 HPS4Q9NQG7 708 aa11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 POLR3BQ9NW08 1133 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 ZNHIT2Q9UHR6 403 aa11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 TSC22D4Q9Y3Q8 395 aa11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 PCDHB1Q9Y5F3 818 aa11.51□□□□□ -0.57
TRAPPC9-202ENST00000438773 PAPPA2Q9BXP8 1791 aa11.5□□□□□ -0.57
TRAPPC9-202ENST00000438773 C1QTNF3-AMACRE9PGA6 284 aa11.5□□□□□ -0.57
TRAPPC9-202ENST00000438773 RFPL1O75677 317 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms