RNA–Protein interactions for RNA: ENST00000435815.1

SNRPEP4-201, Transcript of small nuclear ribonucleoprotein polypeptide E pseudogene 4, humanhuman

BASIC

Gene SNRPEP4, Length 279 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP4-201ENST00000435815 HOXA13P31271 388 aaPredicted RBP3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 CCR1P32246 355 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 CHRNA3P32297 505 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 HTR7P34969 479 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 HSD17B2P37059 387 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 OR1G1P47890 313 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 TOB1P50616 345 aaPredicted RBP3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 RAB28P51157 221 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 CLCNKBP51801 687 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 ZNF135P52742 658 aaPredicted RBP3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 MVDP53602 400 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 EFNB1P98172 346 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 TFAP4Q01664 338 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 GCNT1Q02742 428 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 ACY1Q03154 408 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 CSTF3Q12996 717 aaKnown RBP3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 FRG1Q14331 258 aaKnown RBP3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 RRS1Q15050 365 aaKnown RBP3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 AAK1Q2M2I8 961 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 PTCHD3Q3KNS1 767 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 AARDQ4LEZ3 155 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 IGSF11Q5DX21 431 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 KCNT1Q5JUK3 1230 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 ZNF569Q5MCW4 686 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 SH2D4BQ5SQS7 431 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 DAB2IPQ5VWQ8 1189 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 KRT79Q5XKE5 535 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 PMS2CLQ68D20 193 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 NAPEPLDQ6IQ20 393 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 RBM43Q6ZSC3 357 aaKnown RBP3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 CAMKMTQ7Z624 323 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 TAF8Q7Z7C8 310 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 AMZ2Q86W34 360 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 RASGEF1CQ8N431 466 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 FAM46DQ8NEK8 389 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 LPCAT1Q8NF37 534 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 CADM4Q8NFZ8 388 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 OR2T34Q8NGX1 318 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 MYCBPAPQ8TBZ2 947 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 BCAS4Q8TDM0 211 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 DDX17Q92841 729 aaKnown RBP3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 FAM149B1Q96BN6 582 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 PTERQ96BW5 349 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 HDAC11Q96DB2 347 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 PIWIL1Q96J94 861 aaKnown RBP3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 SAMD8Q96LT4 415 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 CAMK1GQ96NX5 476 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 OR2A14Q96R47 310 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 PKP2Q99959 881 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 SEMA3CQ99985 751 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 VKORC1Q9BQB6 163 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 BCL7BQ9BQE9 202 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 FERMT1Q9BQL6 677 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 THUMPD2Q9BTF0 503 aaKnown RBP3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 KIFC3Q9BVG8 833 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 PUS3Q9BZE2 481 aaKnown RBP3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 NUAK2Q9H093 628 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 OSGEPL1Q9H4B0 414 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 USP29Q9HBJ7 922 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 ARL8BQ9NVJ2 186 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 ARHGEF38Q9NXL2 777 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 GDAP2Q9NXN4 497 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 JKAMPQ9P055 326 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 HDAC6Q9UBN7 1215 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 RCOR1Q9UKL0 485 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 USP22Q9UPT9 525 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 OSGIN2Q9Y236 505 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 MRPL11Q9Y3B7 192 aaKnown RBP3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 TNIKQ9UKE5 1360 aa3.38□□□□□ -1.87
SNRPEP4-201ENST00000435815 A0A1W2PR77 199 aa3.37□□□□□ -1.87
SNRPEP4-201ENST00000435815 TCRBV7S2A1N4TA0A589 114 aa3.37□□□□□ -1.87
SNRPEP4-201ENST00000435815 ELOVL7A1L3X0 281 aa3.37□□□□□ -1.87
SNRPEP4-201ENST00000435815 C5orf51A6NDU8 294 aa3.37□□□□□ -1.87
SNRPEP4-201ENST00000435815 VWC2LB2RUY7 222 aa3.37□□□□□ -1.87
SNRPEP4-201ENST00000435815 H0YIN7 160 aa3.37□□□□□ -1.87
SNRPEP4-201ENST00000435815 RASGRF2O14827 1237 aa3.37□□□□□ -1.87
SNRPEP4-201ENST00000435815 PER2O15055 1255 aa3.37□□□□□ -1.87
SNRPEP4-201ENST00000435815 POLR3GO15318 223 aaPredicted RBP3.37□□□□□ -1.87
SNRPEP4-201ENST00000435815 CTAGE5O15320 804 aa3.37□□□□□ -1.87
SNRPEP4-201ENST00000435815 INSIG1O15503 277 aa3.37□□□□□ -1.87
SNRPEP4-201ENST00000435815 CTIFO43310 598 aaKnown RBP3.37□□□□□ -1.87
SNRPEP4-201ENST00000435815 CACNG3O60359 315 aa3.37□□□□□ -1.87
SNRPEP4-201ENST00000435815 NMT2O60551 498 aa3.37□□□□□ -1.87
SNRPEP4-201ENST00000435815 MITFO75030 526 aaPredicted RBP3.37□□□□□ -1.87
SNRPEP4-201ENST00000435815 AVILO75366 819 aa3.37□□□□□ -1.87
SNRPEP4-201ENST00000435815 NME6O75414 186 aaPredicted RBP3.37□□□□□ -1.87
SNRPEP4-201ENST00000435815 ERLIN1O75477 346 aa3.37□□□□□ -1.87
SNRPEP4-201ENST00000435815 CELF2O95319 508 aaKnown RBP3.37□□□□□ -1.87
SNRPEP4-201ENST00000435815 VNN2O95498 520 aa3.37□□□□□ -1.87
SNRPEP4-201ENST00000435815 SNHG28P0DPA3 235 aa3.37□□□□□ -1.87
SNRPEP4-201ENST00000435815 FCER1AP12319 257 aa3.37□□□□□ -1.87
SNRPEP4-201ENST00000435815 LYL1P12980 280 aa3.37□□□□□ -1.87
SNRPEP4-201ENST00000435815 IL2RBP14784 551 aa3.37□□□□□ -1.87
SNRPEP4-201ENST00000435815 ARSAP15289 507 aa3.37□□□□□ -1.87
SNRPEP4-201ENST00000435815 CSF2RAP15509 400 aa3.37□□□□□ -1.87
SNRPEP4-201ENST00000435815 ADRA2CP18825 462 aa3.37□□□□□ -1.87
SNRPEP4-201ENST00000435815 EPORP19235 508 aa3.37□□□□□ -1.87
SNRPEP4-201ENST00000435815 ACHEP22303 614 aa3.37□□□□□ -1.87
SNRPEP4-201ENST00000435815 SFPQP23246 707 aaKnown RBP eCLIP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms