RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 SIRPGQ9P1W8 387 aa16.14■□□□□ 0.17
SMPD4-207ENST00000435455 TMEM98Q9Y2Y6 226 aa16.14■□□□□ 0.17
SMPD4-207ENST00000435455 C1QTNF9BB2RNN3 333 aa16.13■□□□□ 0.17
SMPD4-207ENST00000435455 AURKAO14965 403 aa16.13■□□□□ 0.17
SMPD4-207ENST00000435455 PPFIA2O75334 1257 aa16.13■□□□□ 0.17
SMPD4-207ENST00000435455 C1QTNF9P0C862 333 aa16.13■□□□□ 0.17
SMPD4-207ENST00000435455 STIP1P31948 543 aaKnown RBP16.13■□□□□ 0.17
SMPD4-207ENST00000435455 ADRA1AP35348 466 aa16.13■□□□□ 0.17
SMPD4-207ENST00000435455 PARP6Q2NL67 630 aa16.13■□□□□ 0.17
SMPD4-207ENST00000435455 OGFOD3Q6PK18 319 aa16.13■□□□□ 0.17
SMPD4-207ENST00000435455 PHYKPLQ8IUZ5 450 aa16.13■□□□□ 0.17
SMPD4-207ENST00000435455 KLHDC8BQ8IXV7 354 aa16.13■□□□□ 0.17
SMPD4-207ENST00000435455 GPR156Q8NFN8 814 aa16.13■□□□□ 0.17
SMPD4-207ENST00000435455 WDR48Q8TAF3 677 aa16.13■□□□□ 0.17
SMPD4-207ENST00000435455 MAIP1Q8WWC4 291 aa16.13■□□□□ 0.17
SMPD4-207ENST00000435455 RTP4Q96DX8 246 aa16.13■□□□□ 0.17
SMPD4-207ENST00000435455 TMEM121Q9BTD3 319 aa16.13■□□□□ 0.17
SMPD4-207ENST00000435455 RMI1Q9H9A7 625 aa16.13■□□□□ 0.17
SMPD4-207ENST00000435455 PKP3Q9Y446 797 aa16.13■□□□□ 0.17
SMPD4-207ENST00000435455 GPSM3Q9Y4H4 160 aa16.13■□□□□ 0.17
SMPD4-207ENST00000435455 OAS3Q9Y6K5 1087 aaKnown RBP16.13■□□□□ 0.17
SMPD4-207ENST00000435455 ANKRD11Q6UB99 2663 aaPredicted RBP16.12■□□□□ 0.17
SMPD4-207ENST00000435455 FAM149AA5PLN7 773 aa16.12■□□□□ 0.17
SMPD4-207ENST00000435455 LIASO43766 372 aa16.12■□□□□ 0.17
SMPD4-207ENST00000435455 SLC25A14O95258 325 aaPredicted RBP16.12■□□□□ 0.17
SMPD4-207ENST00000435455 MT-CO3P00414 261 aa16.12■□□□□ 0.17
SMPD4-207ENST00000435455 ATP1A1P05023 1023 aaKnown RBP16.12■□□□□ 0.17
SMPD4-207ENST00000435455 CTBSQ01459 385 aa16.12■□□□□ 0.17
SMPD4-207ENST00000435455 LRP8Q14114 963 aa16.12■□□□□ 0.17
SMPD4-207ENST00000435455 P3H1Q32P28 736 aa16.12■□□□□ 0.17
SMPD4-207ENST00000435455 PYCR3Q53H96 274 aa16.12■□□□□ 0.17
SMPD4-207ENST00000435455 MARK2Q7KZI7 788 aaKnown RBP16.12■□□□□ 0.17
SMPD4-207ENST00000435455 NRROSQ86YC3 692 aa16.12■□□□□ 0.17
SMPD4-207ENST00000435455 PDCD7Q8N8D1 485 aaKnown RBP16.12■□□□□ 0.17
SMPD4-207ENST00000435455 DCBLD1Q8N8Z6 715 aa16.12■□□□□ 0.17
SMPD4-207ENST00000435455 CCL4L1Q8NHW4 92 aa16.12■□□□□ 0.17
SMPD4-207ENST00000435455 DTX3LQ8TDB6 740 aa16.12■□□□□ 0.17
SMPD4-207ENST00000435455 PTCD2Q8WV60 388 aaKnown RBP16.12■□□□□ 0.17
SMPD4-207ENST00000435455 ATG4AQ8WYN0 398 aa16.12■□□□□ 0.17
SMPD4-207ENST00000435455 GLYATL1Q969I3 302 aa16.12■□□□□ 0.17
SMPD4-207ENST00000435455 TBL1YQ9BQ87 522 aa16.12■□□□□ 0.17
SMPD4-207ENST00000435455 TLR10Q9BXR5 811 aa16.12■□□□□ 0.17
SMPD4-207ENST00000435455 DPEP2Q9H4A9 486 aa16.12■□□□□ 0.17
SMPD4-207ENST00000435455 ARNT2Q9HBZ2 717 aa16.12■□□□□ 0.17
SMPD4-207ENST00000435455 BPIFA1Q9NP55 256 aa16.12■□□□□ 0.17
SMPD4-207ENST00000435455 IL17CQ9P0M4 197 aa16.12■□□□□ 0.17
SMPD4-207ENST00000435455 ZNHIT2Q9UHR6 403 aa16.12■□□□□ 0.17
SMPD4-207ENST00000435455 FEZ2Q9UHY8 353 aaPredicted RBP16.12■□□□□ 0.17
SMPD4-207ENST00000435455 CLCA2Q9UQC9 943 aa16.12■□□□□ 0.17
SMPD4-207ENST00000435455 C2orf81A6NN90 581 aa16.11■□□□□ 0.17
SMPD4-207ENST00000435455 B4DGG1 531 aa16.11■□□□□ 0.17
SMPD4-207ENST00000435455 GPR89AB7ZAQ6 455 aa16.11■□□□□ 0.17
SMPD4-207ENST00000435455 PSMD3O43242 534 aa16.11■□□□□ 0.17
SMPD4-207ENST00000435455 ZSCAN12O43309 604 aa16.11■□□□□ 0.17
SMPD4-207ENST00000435455 NOBOXO60393 691 aa16.11■□□□□ 0.17
SMPD4-207ENST00000435455 GPR89BP0CG08 455 aa16.11■□□□□ 0.17
SMPD4-207ENST00000435455 SPAM1P38567 509 aa16.11■□□□□ 0.17
SMPD4-207ENST00000435455 CLDN6P56747 220 aa16.11■□□□□ 0.17
SMPD4-207ENST00000435455 TARDBPQ13148 414 aaKnown RBP eCLIP16.11■□□□□ 0.17
SMPD4-207ENST00000435455 CAMK2BQ13554 666 aa16.11■□□□□ 0.17
SMPD4-207ENST00000435455 OASLQ15646 514 aaKnown RBP16.11■□□□□ 0.17
SMPD4-207ENST00000435455 PERM1Q5SV97 790 aa16.11■□□□□ 0.17
SMPD4-207ENST00000435455 CDCP2Q5VXM1 449 aa16.11■□□□□ 0.17
SMPD4-207ENST00000435455 SLC30A9Q6PML9 568 aa16.11■□□□□ 0.17
SMPD4-207ENST00000435455 MARCH9Q86YJ5 346 aa16.11■□□□□ 0.17
SMPD4-207ENST00000435455 APOL2Q9BQE5 337 aa16.11■□□□□ 0.17
SMPD4-207ENST00000435455 LRRC40Q9H9A6 602 aa16.11■□□□□ 0.17
SMPD4-207ENST00000435455 TAAR2Q9P1P5 351 aa16.11■□□□□ 0.17
SMPD4-207ENST00000435455 ZNF148Q9UQR1 794 aa16.11■□□□□ 0.17
SMPD4-207ENST00000435455 ACACAQ13085 2346 aa16.11■□□□□ 0.17
SMPD4-207ENST00000435455 STX7O15400 261 aaKnown RBP16.1■□□□□ 0.17
SMPD4-207ENST00000435455 NUAK1O60285 661 aa16.1■□□□□ 0.17
SMPD4-207ENST00000435455 DNAJC6O75061 913 aa16.1■□□□□ 0.17
SMPD4-207ENST00000435455 GLB1P16278 677 aa16.1■□□□□ 0.17
SMPD4-207ENST00000435455 LPOP22079 712 aaPredicted RBP16.1■□□□□ 0.17
SMPD4-207ENST00000435455 AK4P27144 223 aaPredicted RBP16.1■□□□□ 0.17
SMPD4-207ENST00000435455 ACTN2P35609 894 aa16.1■□□□□ 0.17
SMPD4-207ENST00000435455 ACTR1BP42025 376 aa16.1■□□□□ 0.17
SMPD4-207ENST00000435455 GDF10P55107 478 aa16.1■□□□□ 0.17
SMPD4-207ENST00000435455 ACTR1AP61163 376 aa16.1■□□□□ 0.17
SMPD4-207ENST00000435455 PDE1BQ01064 536 aa16.1■□□□□ 0.17
SMPD4-207ENST00000435455 TAF1AQ15573 450 aaPredicted RBP16.1■□□□□ 0.17
SMPD4-207ENST00000435455 C14orf28Q4W4Y0 310 aa16.1■□□□□ 0.17
SMPD4-207ENST00000435455 CERCAMQ5T4B2 595 aa16.1■□□□□ 0.17
SMPD4-207ENST00000435455 KDF1Q8NAX2 398 aaPredicted RBP16.1■□□□□ 0.17
SMPD4-207ENST00000435455 BRSK1Q8TDC3 778 aa16.1■□□□□ 0.17
SMPD4-207ENST00000435455 ZDHHC1Q8WTX9 485 aa16.1■□□□□ 0.17
SMPD4-207ENST00000435455 C1orf54Q8WWF1 131 aa16.1■□□□□ 0.17
SMPD4-207ENST00000435455 CCDC74AQ96AQ1 378 aa16.1■□□□□ 0.17
SMPD4-207ENST00000435455 DEPDC7Q96QD5 511 aa16.1■□□□□ 0.17
SMPD4-207ENST00000435455 VPS35Q96QK1 796 aa16.1■□□□□ 0.17
SMPD4-207ENST00000435455 CCDC3Q9BQI4 270 aa16.1■□□□□ 0.17
SMPD4-207ENST00000435455 OR2AG1Q9H205 316 aa16.1■□□□□ 0.17
SMPD4-207ENST00000435455 TRIM39Q9HCM9 518 aa16.1■□□□□ 0.17
SMPD4-207ENST00000435455 IL26Q9NPH9 171 aa16.1■□□□□ 0.17
SMPD4-207ENST00000435455 SPATS2LQ9NUQ6 558 aaKnown RBP16.1■□□□□ 0.17
SMPD4-207ENST00000435455 ZKSCAN5Q9Y2L8 839 aa16.1■□□□□ 0.17
SMPD4-207ENST00000435455 ZNF106Q9H2Y7 1883 aaKnown RBP16.1■□□□□ 0.17
SMPD4-207ENST00000435455 FREM2Q5SZK8 3169 aa16.1■□□□□ 0.17
SMPD4-207ENST00000435455 ASPMQ8IZT6 3477 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms