RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 MDGA1Q8NFP4 955 aa11.89□□□□□ -0.51
CTCFL-209ENST00000433949 STAG3L4Q8TBR4 150 aa11.89□□□□□ -0.51
CTCFL-209ENST00000433949 LPGAT1Q92604 370 aa11.89□□□□□ -0.51
CTCFL-209ENST00000433949 ACDQ96AP0 544 aa11.89□□□□□ -0.51
CTCFL-209ENST00000433949 PHF21BQ96EK2 531 aa11.89□□□□□ -0.51
CTCFL-209ENST00000433949 NAF1Q96HR8 494 aaKnown RBP11.89□□□□□ -0.51
CTCFL-209ENST00000433949 CLPTM1LQ96KA5 538 aa11.89□□□□□ -0.51
CTCFL-209ENST00000433949 C2orf49Q9BVC5 232 aaPredicted RBP11.89□□□□□ -0.51
CTCFL-209ENST00000433949 DERL2Q9GZP9 239 aa11.89□□□□□ -0.51
CTCFL-209ENST00000433949 SFXN1Q9H9B4 322 aa11.89□□□□□ -0.51
CTCFL-209ENST00000433949 CYP4F12Q9HCS2 524 aa11.89□□□□□ -0.51
CTCFL-209ENST00000433949 SPO11Q9Y5K1 396 aa11.89□□□□□ -0.51
CTCFL-209ENST00000433949 HELZP42694 1942 aaKnown RBP11.89□□□□□ -0.51
CTCFL-209ENST00000433949 ATG2AQ2TAZ0 1938 aa11.89□□□□□ -0.51
CTCFL-209ENST00000433949 MTCL1Q9Y4B5 1905 aaKnown RBP11.89□□□□□ -0.51
CTCFL-209ENST00000433949 UBA6A0AVT1 1052 aaPredicted RBP11.88□□□□□ -0.51
CTCFL-209ENST00000433949 GFRA2O00451 464 aa11.88□□□□□ -0.51
CTCFL-209ENST00000433949 SDHDO14521 159 aa11.88□□□□□ -0.51
CTCFL-209ENST00000433949 STX7O15400 261 aaKnown RBP11.88□□□□□ -0.51
CTCFL-209ENST00000433949 SRP72O76094 671 aaKnown RBP11.88□□□□□ -0.51
CTCFL-209ENST00000433949 KCNA5P22460 613 aa11.88□□□□□ -0.51
CTCFL-209ENST00000433949 HOXA9P31269 272 aa11.88□□□□□ -0.51
CTCFL-209ENST00000433949 MAPK8P45983 427 aa11.88□□□□□ -0.51
CTCFL-209ENST00000433949 ADARP55265 1226 aaKnown RBP11.88□□□□□ -0.51
CTCFL-209ENST00000433949 RHOAP61586 193 aa11.88□□□□□ -0.51
CTCFL-209ENST00000433949 AP1S1P61966 158 aa11.88□□□□□ -0.51
CTCFL-209ENST00000433949 TBL3Q12788 808 aaKnown RBP11.88□□□□□ -0.51
CTCFL-209ENST00000433949 PTPRCAPQ14761 206 aa11.88□□□□□ -0.51
CTCFL-209ENST00000433949 MAPRE2Q15555 327 aa11.88□□□□□ -0.51
CTCFL-209ENST00000433949 SYCE2Q6PIF2 218 aa11.88□□□□□ -0.51
CTCFL-209ENST00000433949 LRRC74BQ6ZQY2 392 aa11.88□□□□□ -0.51
CTCFL-209ENST00000433949 PIM3Q86V86 326 aa11.88□□□□□ -0.51
CTCFL-209ENST00000433949 NKAPQ8N5F7 415 aaKnown RBP11.88□□□□□ -0.51
CTCFL-209ENST00000433949 EFHBQ8N7U6 833 aa11.88□□□□□ -0.51
CTCFL-209ENST00000433949 KYQ8NBH2 561 aa11.88□□□□□ -0.51
CTCFL-209ENST00000433949 CDCA3Q99618 268 aaPredicted RBP11.88□□□□□ -0.51
CTCFL-209ENST00000433949 SHCBP1LQ9BZQ2 653 aa11.88□□□□□ -0.51
CTCFL-209ENST00000433949 GSTO2Q9H4Y5 243 aa11.88□□□□□ -0.51
CTCFL-209ENST00000433949 ACSS2Q9NR19 701 aa11.88□□□□□ -0.51
CTCFL-209ENST00000433949 BRWD1Q9NSI6 2320 aa11.88□□□□□ -0.51
CTCFL-209ENST00000433949 PCDHGC4Q9Y5F7 938 aa11.88□□□□□ -0.51
CTCFL-209ENST00000433949 ANKRD12Q6UB98 2062 aa11.88□□□□□ -0.51
CTCFL-209ENST00000433949 COL6A3P12111 3177 aa11.88□□□□□ -0.51
CTCFL-209ENST00000433949 ZNF106Q9H2Y7 1883 aaKnown RBP11.88□□□□□ -0.51
CTCFL-209ENST00000433949 TRAV19A0A0A6YYK7 116 aa11.88□□□□□ -0.51
CTCFL-209ENST00000433949 CXorf51AA0A1B0GTR3 108 aa11.88□□□□□ -0.51
CTCFL-209ENST00000433949 GOLGA8CPA6NN73 597 aa11.88□□□□□ -0.51
CTCFL-209ENST00000433949 SYCE1LA8MT33 242 aa11.88□□□□□ -0.51
CTCFL-209ENST00000433949 NVLO15381 856 aaKnown RBP11.88□□□□□ -0.51
CTCFL-209ENST00000433949 RHOBTB1O94844 696 aa11.88□□□□□ -0.51
CTCFL-209ENST00000433949 SUPT7LO94864 414 aa11.88□□□□□ -0.51
CTCFL-209ENST00000433949 CD160O95971 181 aa11.88□□□□□ -0.51
CTCFL-209ENST00000433949 PDHA1P08559 390 aa11.88□□□□□ -0.51
CTCFL-209ENST00000433949 RPSAP08865 295 aaKnown RBP11.88□□□□□ -0.51
CTCFL-209ENST00000433949 PFKLP17858 780 aa11.88□□□□□ -0.51
CTCFL-209ENST00000433949 MTTPP55157 894 aa11.88□□□□□ -0.51
CTCFL-209ENST00000433949 TIAL1Q01085 375 aaKnown RBP eCLIP11.88□□□□□ -0.51
CTCFL-209ENST00000433949 RAD51Q06609 339 aa11.88□□□□□ -0.51
CTCFL-209ENST00000433949 MUM1Q2TAK8 710 aa11.88□□□□□ -0.51
CTCFL-209ENST00000433949 MPP7Q5T2T1 576 aa11.88□□□□□ -0.51
CTCFL-209ENST00000433949 RETSATQ6NUM9 610 aa11.88□□□□□ -0.51
CTCFL-209ENST00000433949 CHSY3Q70JA7 882 aa11.88□□□□□ -0.51
CTCFL-209ENST00000433949 ADGRG6Q86SQ4 1221 aa11.88□□□□□ -0.51
CTCFL-209ENST00000433949 STK40Q8N2I9 435 aa11.88□□□□□ -0.51
CTCFL-209ENST00000433949 FBXW8Q8N3Y1 598 aa11.88□□□□□ -0.51
CTCFL-209ENST00000433949 CPXM2Q8N436 756 aa11.88□□□□□ -0.51
CTCFL-209ENST00000433949 KCNV2Q8TDN2 545 aa11.88□□□□□ -0.51
CTCFL-209ENST00000433949 KIAA1191Q96A73 305 aa11.88□□□□□ -0.51
CTCFL-209ENST00000433949 PTERQ96BW5 349 aa11.88□□□□□ -0.51
CTCFL-209ENST00000433949 PPP1R36Q96LQ0 422 aa11.88□□□□□ -0.51
CTCFL-209ENST00000433949 OSBPL1AQ9BXW6 950 aa11.88□□□□□ -0.51
CTCFL-209ENST00000433949 EFCAB1Q9HAE3 211 aa11.88□□□□□ -0.51
CTCFL-209ENST00000433949 BATF3Q9NR55 127 aa11.88□□□□□ -0.51
CTCFL-209ENST00000433949 CLEC1BQ9P126 229 aa11.88□□□□□ -0.51
CTCFL-209ENST00000433949 CFAP97Q9P2B7 532 aa11.88□□□□□ -0.51
CTCFL-209ENST00000433949 LHX3Q9UBR4 397 aa11.88□□□□□ -0.51
CTCFL-209ENST00000433949 BCAP29Q9UHQ4 241 aa11.88□□□□□ -0.51
CTCFL-209ENST00000433949 TMCO1Q9UM00 188 aa11.88□□□□□ -0.51
CTCFL-209ENST00000433949 OR51B4Q9Y5P0 310 aa11.88□□□□□ -0.51
CTCFL-209ENST00000433949 A0A1W2PPC1 479 aa11.87□□□□□ -0.51
CTCFL-209ENST00000433949 KERAO60938 352 aa11.87□□□□□ -0.51
CTCFL-209ENST00000433949 VPS26AO75436 327 aa11.87□□□□□ -0.51
CTCFL-209ENST00000433949 JUNP05412 331 aaKnown RBP11.87□□□□□ -0.51
CTCFL-209ENST00000433949 ACADSP16219 412 aa11.87□□□□□ -0.51
CTCFL-209ENST00000433949 PLK1P53350 603 aa11.87□□□□□ -0.51
CTCFL-209ENST00000433949 SESN3P58005 492 aa11.87□□□□□ -0.51
CTCFL-209ENST00000433949 RPL26P61254 145 aaKnown RBP11.87□□□□□ -0.51
CTCFL-209ENST00000433949 TRAF2Q12933 501 aa11.87□□□□□ -0.51
CTCFL-209ENST00000433949 ADAM15Q13444 863 aa11.87□□□□□ -0.51
CTCFL-209ENST00000433949 ARHGAP15Q53QZ3 475 aa11.87□□□□□ -0.51
CTCFL-209ENST00000433949 PRSS36Q5K4E3 855 aa11.87□□□□□ -0.51
CTCFL-209ENST00000433949 ANKRD54Q6NXT1 300 aa11.87□□□□□ -0.51
CTCFL-209ENST00000433949 GET4Q7L5D6 327 aaPredicted RBP11.87□□□□□ -0.51
CTCFL-209ENST00000433949 SNX32Q86XE0 403 aa11.87□□□□□ -0.51
CTCFL-209ENST00000433949 CMTM8Q8IZV2 173 aa11.87□□□□□ -0.51
CTCFL-209ENST00000433949 PELI3Q8N2H9 469 aa11.87□□□□□ -0.51
CTCFL-209ENST00000433949 DNAJC9Q8WXX5 260 aa11.87□□□□□ -0.51
CTCFL-209ENST00000433949 NSMCE3Q96MG7 304 aa11.87□□□□□ -0.51
CTCFL-209ENST00000433949 CATSPER2Q96P56 530 aa11.87□□□□□ -0.51
CTCFL-209ENST00000433949 MAGEE1Q9HCI5 957 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms