RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 HSPA1AP0DMV8 641 aaKnown RBP14.58□□□□□ -0.08
RFTN1-203ENST00000432519 HSPA1BP0DMV9 641 aaKnown RBP14.58□□□□□ -0.08
RFTN1-203ENST00000432519 PSMA3P25788 255 aa14.58□□□□□ -0.08
RFTN1-203ENST00000432519 MRPS22P82650 360 aaKnown RBP14.58□□□□□ -0.08
RFTN1-203ENST00000432519 ART3Q13508 389 aa14.58□□□□□ -0.08
RFTN1-203ENST00000432519 CDH18Q13634 790 aa14.58□□□□□ -0.08
RFTN1-203ENST00000432519 LAMB3Q13751 1172 aa14.58□□□□□ -0.08
RFTN1-203ENST00000432519 PTK2BQ14289 1009 aa14.58□□□□□ -0.08
RFTN1-203ENST00000432519 FASTKQ14296 549 aaKnown RBP14.58□□□□□ -0.08
RFTN1-203ENST00000432519 AAGABQ6PD74 315 aa14.58□□□□□ -0.08
RFTN1-203ENST00000432519 CPNE9Q8IYJ1 553 aa14.58□□□□□ -0.08
RFTN1-203ENST00000432519 PGAM4Q8N0Y7 254 aa14.58□□□□□ -0.08
RFTN1-203ENST00000432519 PPFIBP2Q8ND30 876 aa14.58□□□□□ -0.08
RFTN1-203ENST00000432519 RHEBL1Q8TAI7 183 aa14.58□□□□□ -0.08
RFTN1-203ENST00000432519 CD200R1Q8TD46 325 aa14.58□□□□□ -0.08
RFTN1-203ENST00000432519 LRCH3Q96II8 777 aa14.58□□□□□ -0.08
RFTN1-203ENST00000432519 TNKS2Q9H2K2 1166 aa14.58□□□□□ -0.08
RFTN1-203ENST00000432519 TFB2MQ9H5Q4 396 aaKnown RBP14.58□□□□□ -0.08
RFTN1-203ENST00000432519 EFCAB1Q9HAE3 211 aa14.58□□□□□ -0.08
RFTN1-203ENST00000432519 RNF112Q9ULX5 631 aa14.58□□□□□ -0.08
RFTN1-203ENST00000432519 PCDHGA7Q9Y5G6 932 aa14.58□□□□□ -0.08
RFTN1-203ENST00000432519 OAS3Q9Y6K5 1087 aaKnown RBP14.58□□□□□ -0.08
RFTN1-203ENST00000432519 LCHNA4D1U4 455 aa14.57□□□□□ -0.08
RFTN1-203ENST00000432519 E7ENX8 843 aa14.57□□□□□ -0.08
RFTN1-203ENST00000432519 PSMD12O00232 456 aaPredicted RBP14.57□□□□□ -0.08
RFTN1-203ENST00000432519 SLC22A2O15244 555 aa14.57□□□□□ -0.08
RFTN1-203ENST00000432519 CNPP09543 421 aaKnown RBP14.57□□□□□ -0.08
RFTN1-203ENST00000432519 EPHB3P54753 998 aa14.57□□□□□ -0.08
RFTN1-203ENST00000432519 HERC3Q15034 1050 aa14.57□□□□□ -0.08
RFTN1-203ENST00000432519 GEN1Q17RS7 908 aa14.57□□□□□ -0.08
RFTN1-203ENST00000432519 CMPK2Q5EBM0 449 aa14.57□□□□□ -0.08
RFTN1-203ENST00000432519 C16orf89Q6UX73 402 aa14.57□□□□□ -0.08
RFTN1-203ENST00000432519 HERC6Q8IVU3 1022 aa14.57□□□□□ -0.08
RFTN1-203ENST00000432519 RPL10LQ96L21 214 aaKnown RBP14.57□□□□□ -0.08
RFTN1-203ENST00000432519 ECSITQ9BQ95 431 aa14.57□□□□□ -0.08
RFTN1-203ENST00000432519 HERC2P3Q9BVR0 1158 aa14.57□□□□□ -0.08
RFTN1-203ENST00000432519 BOCQ9BWV1 1114 aa14.57□□□□□ -0.08
RFTN1-203ENST00000432519 ADGRE3Q9BY15 652 aa14.57□□□□□ -0.08
RFTN1-203ENST00000432519 DERL2Q9GZP9 239 aa14.57□□□□□ -0.08
RFTN1-203ENST00000432519 IL17CQ9P0M4 197 aa14.57□□□□□ -0.08
RFTN1-203ENST00000432519 HSFX1Q9UBD0 423 aa14.57□□□□□ -0.08
RFTN1-203ENST00000432519 CORO1CQ9ULV4 474 aaPredicted RBP14.57□□□□□ -0.08
RFTN1-203ENST00000432519 REV3LO60673 3130 aa14.57□□□□□ -0.08
RFTN1-203ENST00000432519 GAPDHSO14556 408 aaPredicted RBP14.57□□□□□ -0.08
RFTN1-203ENST00000432519 TGM5O43548 720 aa14.57□□□□□ -0.08
RFTN1-203ENST00000432519 KERAO60938 352 aa14.57□□□□□ -0.08
RFTN1-203ENST00000432519 OLFM2O95897 454 aa14.57□□□□□ -0.08
RFTN1-203ENST00000432519 LINC00032P0C843 101 aa14.57□□□□□ -0.08
RFTN1-203ENST00000432519 PKMP14618 531 aaKnown RBP14.57□□□□□ -0.08
RFTN1-203ENST00000432519 ADSLP30566 484 aaPredicted RBP14.57□□□□□ -0.08
RFTN1-203ENST00000432519 RALGDSQ12967 914 aa14.57□□□□□ -0.08
RFTN1-203ENST00000432519 C18orf21Q32NC0 220 aaPredicted RBP14.57□□□□□ -0.08
RFTN1-203ENST00000432519 SCIMPQ6UWF3 145 aa14.57□□□□□ -0.08
RFTN1-203ENST00000432519 TAS2R42Q7RTR8 314 aa14.57□□□□□ -0.08
RFTN1-203ENST00000432519 ZSWIM9Q86XI8 627 aa14.57□□□□□ -0.08
RFTN1-203ENST00000432519 MFN1Q8IWA4 741 aa14.57□□□□□ -0.08
RFTN1-203ENST00000432519 MICAL1Q8TDZ2 1067 aa14.57□□□□□ -0.08
RFTN1-203ENST00000432519 DDI1Q8WTU0 396 aa14.57□□□□□ -0.08
RFTN1-203ENST00000432519 TWIST2Q8WVJ9 160 aa14.57□□□□□ -0.08
RFTN1-203ENST00000432519 PIH1D2Q8WWB5 315 aa14.57□□□□□ -0.08
RFTN1-203ENST00000432519 VOPP1Q96AW1 172 aa14.57□□□□□ -0.08
RFTN1-203ENST00000432519 PCDHAC1Q9H158 963 aa14.57□□□□□ -0.08
RFTN1-203ENST00000432519 CCDC68Q9H2F9 335 aa14.57□□□□□ -0.08
RFTN1-203ENST00000432519 POPDC3Q9HBV1 291 aa14.57□□□□□ -0.08
RFTN1-203ENST00000432519 CACNA2D2Q9NY47 1150 aa14.57□□□□□ -0.08
RFTN1-203ENST00000432519 SPG21Q9NZD8 308 aa14.57□□□□□ -0.08
RFTN1-203ENST00000432519 INTS6Q9UL03 887 aaKnown RBP14.57□□□□□ -0.08
RFTN1-203ENST00000432519 LRCH1Q9Y2L9 728 aa14.57□□□□□ -0.08
RFTN1-203ENST00000432519 GPC4O75487 556 aa14.56□□□□□ -0.08
RFTN1-203ENST00000432519 ZNF821O75541 412 aaPredicted RBP14.56□□□□□ -0.08
RFTN1-203ENST00000432519 SMNDC1O75940 238 aaKnown RBP eCLIP14.56□□□□□ -0.08
RFTN1-203ENST00000432519 CD70P32970 193 aa14.56□□□□□ -0.08
RFTN1-203ENST00000432519 WDR5P61964 334 aaKnown RBP14.56□□□□□ -0.08
RFTN1-203ENST00000432519 LRP8Q14114 963 aa14.56□□□□□ -0.08
RFTN1-203ENST00000432519 ARHGEF6Q15052 776 aa14.56□□□□□ -0.08
RFTN1-203ENST00000432519 FAM151BQ6UXP7 276 aa14.56□□□□□ -0.08
RFTN1-203ENST00000432519 PHYKPLQ8IUZ5 450 aa14.56□□□□□ -0.08
RFTN1-203ENST00000432519 CLYBLQ8N0X4 340 aa14.56□□□□□ -0.08
RFTN1-203ENST00000432519 FBXO39Q8N4B4 442 aa14.56□□□□□ -0.08
RFTN1-203ENST00000432519 RIN3Q8TB24 985 aa14.56□□□□□ -0.08
RFTN1-203ENST00000432519 KLHL32Q96NJ5 620 aa14.56□□□□□ -0.08
RFTN1-203ENST00000432519 TOX2Q96NM4 488 aa14.56□□□□□ -0.08
RFTN1-203ENST00000432519 PLEKHG4BQ96PX9 1271 aa14.56□□□□□ -0.08
RFTN1-203ENST00000432519 DDX50Q9BQ39 737 aaKnown RBP14.56□□□□□ -0.08
RFTN1-203ENST00000432519 TRMOQ9BU70 441 aa14.56□□□□□ -0.08
RFTN1-203ENST00000432519 EBF3Q9H4W6 596 aa14.56□□□□□ -0.08
RFTN1-203ENST00000432519 RETREG1Q9H6L5 497 aa14.56□□□□□ -0.08
RFTN1-203ENST00000432519 PRPF19Q9UMS4 504 aaKnown RBP14.56□□□□□ -0.08
RFTN1-203ENST00000432519 ZNF711Q9Y462 761 aa14.56□□□□□ -0.08
RFTN1-203ENST00000432519 MAP3K13O43283 966 aa14.56□□□□□ -0.08
RFTN1-203ENST00000432519 LILRB3O75022 631 aa14.56□□□□□ -0.08
RFTN1-203ENST00000432519 PENKP01210 267 aaPredicted RBP14.56□□□□□ -0.08
RFTN1-203ENST00000432519 CKMP06732 381 aa14.56□□□□□ -0.08
RFTN1-203ENST00000432519 ITGB6P18564 788 aa14.56□□□□□ -0.08
RFTN1-203ENST00000432519 CHRM3P20309 590 aa14.56□□□□□ -0.08
RFTN1-203ENST00000432519 CTSOP43234 321 aaPredicted RBP14.56□□□□□ -0.08
RFTN1-203ENST00000432519 CLCQ05315 142 aa14.56□□□□□ -0.08
RFTN1-203ENST00000432519 FLOT2Q14254 428 aa14.56□□□□□ -0.08
RFTN1-203ENST00000432519 INO80DQ53TQ3 878 aaPredicted RBP14.56□□□□□ -0.08
RFTN1-203ENST00000432519 PITRM1Q5JRX3 1037 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms