RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 EFCAB3Q8N7B9 438 aa10.09□□□□□ -0.79
ATG4B-212ENST00000430617 RTL3Q8N8U3 475 aaKnown RBP10.09□□□□□ -0.79
ATG4B-212ENST00000430617 BTN2A2Q8WVV5 523 aa10.09□□□□□ -0.79
ATG4B-212ENST00000430617 SEC14L1Q92503 715 aa10.09□□□□□ -0.79
ATG4B-212ENST00000430617 UBXN4Q92575 508 aa10.09□□□□□ -0.79
ATG4B-212ENST00000430617 SLC45A3Q96JT2 553 aa10.09□□□□□ -0.79
ATG4B-212ENST00000430617 TRIM51Q9BSJ1 452 aa10.09□□□□□ -0.79
ATG4B-212ENST00000430617 MAK16Q9BXY0 300 aaKnown RBP10.09□□□□□ -0.79
ATG4B-212ENST00000430617 B3GNT4Q9C0J1 378 aa10.09□□□□□ -0.79
ATG4B-212ENST00000430617 SIK2Q9H0K1 926 aa10.09□□□□□ -0.79
ATG4B-212ENST00000430617 CDH19Q9H159 772 aa10.09□□□□□ -0.79
ATG4B-212ENST00000430617 DMGDHQ9UI17 866 aaKnown RBP10.09□□□□□ -0.79
ATG4B-212ENST00000430617 ERRFI1Q9UJM3 462 aaPredicted RBP10.09□□□□□ -0.79
ATG4B-212ENST00000430617 VANGL2Q9ULK5 521 aa10.09□□□□□ -0.79
ATG4B-212ENST00000430617 PCSK5Q92824 1860 aa10.08□□□□□ -0.8
ATG4B-212ENST00000430617 TYW5A2RUC4 315 aaKnown RBP10.08□□□□□ -0.8
ATG4B-212ENST00000430617 FAM187AA6NFU0 413 aa10.08□□□□□ -0.8
ATG4B-212ENST00000430617 ZSCAN5CA6NGD5 496 aaPredicted RBP10.08□□□□□ -0.8
ATG4B-212ENST00000430617 HEXIM1O94992 359 aaKnown RBP10.08□□□□□ -0.8
ATG4B-212ENST00000430617 MAP3K6O95382 1288 aa10.08□□□□□ -0.8
ATG4B-212ENST00000430617 ECEL1O95672 775 aa10.08□□□□□ -0.8
ATG4B-212ENST00000430617 PDGFAP04085 211 aa10.08□□□□□ -0.8
ATG4B-212ENST00000430617 RHOXF2BP0C7M4 288 aa10.08□□□□□ -0.8
ATG4B-212ENST00000430617 FGF3P11487 239 aaPredicted RBP10.08□□□□□ -0.8
ATG4B-212ENST00000430617 RHOQP17081 205 aa10.08□□□□□ -0.8
ATG4B-212ENST00000430617 KCNJ1P48048 391 aa10.08□□□□□ -0.8
ATG4B-212ENST00000430617 NR2C2P49116 596 aa10.08□□□□□ -0.8
ATG4B-212ENST00000430617 EIF3EP60228 445 aaKnown RBP10.08□□□□□ -0.8
ATG4B-212ENST00000430617 PFN3P60673 137 aa10.08□□□□□ -0.8
ATG4B-212ENST00000430617 GALNT2Q10471 571 aa10.08□□□□□ -0.8
ATG4B-212ENST00000430617 MRPL49Q13405 166 aaKnown RBP10.08□□□□□ -0.8
ATG4B-212ENST00000430617 XRCC4Q13426 336 aa10.08□□□□□ -0.8
ATG4B-212ENST00000430617 SNX1Q13596 522 aa10.08□□□□□ -0.8
ATG4B-212ENST00000430617 PTK6Q13882 451 aa10.08□□□□□ -0.8
ATG4B-212ENST00000430617 PRKD1Q15139 912 aaPredicted RBP10.08□□□□□ -0.8
ATG4B-212ENST00000430617 ALFQ53S48 1182 aa10.08□□□□□ -0.8
ATG4B-212ENST00000430617 TMEM164Q5U3C3 297 aa10.08□□□□□ -0.8
ATG4B-212ENST00000430617 TMCO3Q6UWJ1 677 aa10.08□□□□□ -0.8
ATG4B-212ENST00000430617 CCDC117Q8IWD4 279 aaPredicted RBP10.08□□□□□ -0.8
ATG4B-212ENST00000430617 TP53INP2Q8IXH6 220 aa10.08□□□□□ -0.8
ATG4B-212ENST00000430617 CACNA2D3Q8IZS8 1091 aa10.08□□□□□ -0.8
ATG4B-212ENST00000430617 LGI2Q8N0V4 545 aa10.08□□□□□ -0.8
ATG4B-212ENST00000430617 OR52K2Q8NGK3 314 aa10.08□□□□□ -0.8
ATG4B-212ENST00000430617 GPBAR1Q8TDU6 330 aa10.08□□□□□ -0.8
ATG4B-212ENST00000430617 P3H4Q92791 437 aa10.08□□□□□ -0.8
ATG4B-212ENST00000430617 RTP4Q96DX8 246 aa10.08□□□□□ -0.8
ATG4B-212ENST00000430617 ALG14Q96F25 216 aa10.08□□□□□ -0.8
ATG4B-212ENST00000430617 RHOXF2Q9BQY4 288 aa10.08□□□□□ -0.8
ATG4B-212ENST00000430617 ZYG11BQ9C0D3 744 aa10.08□□□□□ -0.8
ATG4B-212ENST00000430617 NOL6Q9H6R4 1146 aaKnown RBP10.08□□□□□ -0.8
ATG4B-212ENST00000430617 CATSPERBQ9H7T0 1116 aa10.08□□□□□ -0.8
ATG4B-212ENST00000430617 TMEM248Q9NWD8 314 aa10.08□□□□□ -0.8
ATG4B-212ENST00000430617 SLC12A6Q9UHW9 1150 aa10.08□□□□□ -0.8
ATG4B-212ENST00000430617 TCP11X1B4DZS4 312 aa10.07□□□□□ -0.8
ATG4B-212ENST00000430617 F5H5T6 163 aa10.07□□□□□ -0.8
ATG4B-212ENST00000430617 FPGTO14772 594 aa10.07□□□□□ -0.8
ATG4B-212ENST00000430617 DAPK3O43293 454 aa10.07□□□□□ -0.8
ATG4B-212ENST00000430617 MT-CO1P00395 513 aa10.07□□□□□ -0.8
ATG4B-212ENST00000430617 RBP3P10745 1247 aa10.07□□□□□ -0.8
ATG4B-212ENST00000430617 SERPINB6P35237 376 aa10.07□□□□□ -0.8
ATG4B-212ENST00000430617 VASPP50552 380 aaPredicted RBP10.07□□□□□ -0.8
ATG4B-212ENST00000430617 PLK1P53350 603 aa10.07□□□□□ -0.8
ATG4B-212ENST00000430617 GDF10P55107 478 aa10.07□□□□□ -0.8
ATG4B-212ENST00000430617 RPS21P63220 83 aaKnown RBP10.07□□□□□ -0.8
ATG4B-212ENST00000430617 SLC7A5Q01650 507 aa10.07□□□□□ -0.8
ATG4B-212ENST00000430617 SULT2A1Q06520 285 aa10.07□□□□□ -0.8
ATG4B-212ENST00000430617 PTK2BQ14289 1009 aa10.07□□□□□ -0.8
ATG4B-212ENST00000430617 KCTD19Q17RG1 926 aaPredicted RBP10.07□□□□□ -0.8
ATG4B-212ENST00000430617 FAXCQ5TGI0 409 aa10.07□□□□□ -0.8
ATG4B-212ENST00000430617 CXorf57Q6NSI4 855 aaKnown RBP10.07□□□□□ -0.8
ATG4B-212ENST00000430617 TCTN3Q6NUS6 607 aa10.07□□□□□ -0.8
ATG4B-212ENST00000430617 RWDD4Q6NW29 188 aaKnown RBP10.07□□□□□ -0.8
ATG4B-212ENST00000430617 WDR93Q6P2C0 686 aa10.07□□□□□ -0.8
ATG4B-212ENST00000430617 ASB18Q6ZVZ8 466 aa10.07□□□□□ -0.8
ATG4B-212ENST00000430617 SYDE1Q6ZW31 735 aaPredicted RBP10.07□□□□□ -0.8
ATG4B-212ENST00000430617 ERN2Q76MJ5 926 aaKnown RBP10.07□□□□□ -0.8
ATG4B-212ENST00000430617 MAATS1Q7Z4T9 603 aa10.07□□□□□ -0.8
ATG4B-212ENST00000430617 SPRED1Q7Z699 444 aa10.07□□□□□ -0.8
ATG4B-212ENST00000430617 CDKL3Q8IVW4 592 aaPredicted RBP10.07□□□□□ -0.8
ATG4B-212ENST00000430617 UNC5BQ8IZJ1 945 aa10.07□□□□□ -0.8
ATG4B-212ENST00000430617 SH2D3CQ8N5H7 860 aa10.07□□□□□ -0.8
ATG4B-212ENST00000430617 GLIS1Q8NBF1 620 aa10.07□□□□□ -0.8
ATG4B-212ENST00000430617 CHST14Q8NCH0 376 aa10.07□□□□□ -0.8
ATG4B-212ENST00000430617 RCBTB1Q8NDN9 531 aa10.07□□□□□ -0.8
ATG4B-212ENST00000430617 OR2A12Q8NGT7 310 aa10.07□□□□□ -0.8
ATG4B-212ENST00000430617 PRR7Q8TB68 274 aa10.07□□□□□ -0.8
ATG4B-212ENST00000430617 GRK7Q8WTQ7 553 aa10.07□□□□□ -0.8
ATG4B-212ENST00000430617 HDAC11Q96DB2 347 aa10.07□□□□□ -0.8
ATG4B-212ENST00000430617 MOCOSQ96EN8 888 aa10.07□□□□□ -0.8
ATG4B-212ENST00000430617 TBATAQ96M53 351 aa10.07□□□□□ -0.8
ATG4B-212ENST00000430617 CCDC114Q96M63 670 aa10.07□□□□□ -0.8
ATG4B-212ENST00000430617 RPRD1AQ96P16 312 aaPredicted RBP10.07□□□□□ -0.8
ATG4B-212ENST00000430617 TMEM121Q9BTD3 319 aa10.07□□□□□ -0.8
ATG4B-212ENST00000430617 SLC13A1Q9BZW2 595 aa10.07□□□□□ -0.8
ATG4B-212ENST00000430617 RDH14Q9HBH5 336 aa10.07□□□□□ -0.8
ATG4B-212ENST00000430617 PCDH9Q9HC56 1237 aa10.07□□□□□ -0.8
ATG4B-212ENST00000430617 NDFIP2Q9NV92 336 aa10.07□□□□□ -0.8
ATG4B-212ENST00000430617 MPP6Q9NZW5 540 aa10.07□□□□□ -0.8
ATG4B-212ENST00000430617 DKK3Q9UBP4 350 aa10.07□□□□□ -0.8
ATG4B-212ENST00000430617 RAB21Q9UL25 225 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms