RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 CD68P34810 354 aaPredicted RBP20.5■□□□□ 0.87
HSPG2-205ENST00000427897 LSSP48449 732 aa20.5■□□□□ 0.87
HSPG2-205ENST00000427897 GEMP55040 296 aa20.5■□□□□ 0.87
HSPG2-205ENST00000427897 MPP3Q13368 585 aa20.5■□□□□ 0.87
HSPG2-205ENST00000427897 HLTFQ14527 1009 aaKnown RBP eCLIP20.5■□□□□ 0.87
HSPG2-205ENST00000427897 NOMO1Q15155 1222 aa20.5■□□□□ 0.87
HSPG2-205ENST00000427897 PYCR3Q53H96 274 aa20.5■□□□□ 0.87
HSPG2-205ENST00000427897 CERCAMQ5T4B2 595 aa20.5■□□□□ 0.87
HSPG2-205ENST00000427897 PTCD2Q8WV60 388 aaKnown RBP20.5■□□□□ 0.87
HSPG2-205ENST00000427897 LRRC45Q96CN5 670 aa20.5■□□□□ 0.87
HSPG2-205ENST00000427897 TMEM74Q96NL1 305 aa20.5■□□□□ 0.87
HSPG2-205ENST00000427897 WDR24Q96S15 920 aa20.5■□□□□ 0.87
HSPG2-205ENST00000427897 RMI1Q9H9A7 625 aa20.5■□□□□ 0.87
HSPG2-205ENST00000427897 VPS18Q9P253 973 aa20.5■□□□□ 0.87
HSPG2-205ENST00000427897 RABGEF1Q9UJ41 708 aa20.5■□□□□ 0.87
HSPG2-205ENST00000427897 APPL1Q9UKG1 709 aa20.5■□□□□ 0.87
HSPG2-205ENST00000427897 FADS2P1A8MWK0 482 aa20.49■□□□□ 0.87
HSPG2-205ENST00000427897 KCNN4O15554 427 aa20.49■□□□□ 0.87
HSPG2-205ENST00000427897 EPOP01588 193 aa20.49■□□□□ 0.87
HSPG2-205ENST00000427897 RBP3P10745 1247 aa20.49■□□□□ 0.87
HSPG2-205ENST00000427897 PYGMP11217 842 aa20.49■□□□□ 0.87
HSPG2-205ENST00000427897 INHBCP55103 352 aa20.49■□□□□ 0.87
HSPG2-205ENST00000427897 MAZP56270 477 aaKnown RBP20.49■□□□□ 0.87
HSPG2-205ENST00000427897 LRP8Q14114 963 aa20.49■□□□□ 0.87
HSPG2-205ENST00000427897 TBC1D25Q3MII6 688 aa20.49■□□□□ 0.87
HSPG2-205ENST00000427897 TRAM1L1Q8N609 369 aa20.49■□□□□ 0.87
HSPG2-205ENST00000427897 GPR26Q8NDV2 337 aa20.49■□□□□ 0.87
HSPG2-205ENST00000427897 WDR36Q8NI36 951 aaKnown RBP20.49■□□□□ 0.87
HSPG2-205ENST00000427897 GDAP1Q8TB36 358 aa20.49■□□□□ 0.87
HSPG2-205ENST00000427897 SCARF2Q96GP6 870 aaPredicted RBP20.49■□□□□ 0.87
HSPG2-205ENST00000427897 ZNF578Q96N58 590 aaPredicted RBP20.49■□□□□ 0.87
HSPG2-205ENST00000427897 ZMYND15Q9H091 742 aa20.49■□□□□ 0.87
HSPG2-205ENST00000427897 TRABDQ9H4I3 376 aa20.49■□□□□ 0.87
HSPG2-205ENST00000427897 C10orf88Q9H8K7 445 aa20.49■□□□□ 0.87
HSPG2-205ENST00000427897 BPIFA1Q9NP55 256 aa20.49■□□□□ 0.87
HSPG2-205ENST00000427897 THSD1Q9NS62 852 aa20.49■□□□□ 0.87
HSPG2-205ENST00000427897 HACD3Q9P035 362 aa20.49■□□□□ 0.87
HSPG2-205ENST00000427897 TRIM10Q9UDY6 481 aa20.49■□□□□ 0.87
HSPG2-205ENST00000427897 PRKAB1Q9Y478 270 aa20.49■□□□□ 0.87
HSPG2-205ENST00000427897 PLEKHM1Q9Y4G2 1056 aa20.49■□□□□ 0.87
HSPG2-205ENST00000427897 TRBV23OR9-2A0A075B6M9 112 aa20.48■□□□□ 0.87
HSPG2-205ENST00000427897 CCDC187A0A096LP49 1063 aa20.48■□□□□ 0.87
HSPG2-205ENST00000427897 LOC285095A0A1B0GVY8 99 aa20.48■□□□□ 0.87
HSPG2-205ENST00000427897 NTN3O00634 580 aaPredicted RBP20.48■□□□□ 0.87
HSPG2-205ENST00000427897 ZNF189O75820 626 aaPredicted RBP20.48■□□□□ 0.87
HSPG2-205ENST00000427897 FTCDO95954 541 aa20.48■□□□□ 0.87
HSPG2-205ENST00000427897 HLA-DPA1P20036 260 aa20.48■□□□□ 0.87
HSPG2-205ENST00000427897 PTPN7P35236 360 aa20.48■□□□□ 0.87
HSPG2-205ENST00000427897 ABCG1P45844 678 aa20.48■□□□□ 0.87
HSPG2-205ENST00000427897 DCDC1P59894 354 aa20.48■□□□□ 0.87
HSPG2-205ENST00000427897 COL28A1Q2UY09 1125 aa20.48■□□□□ 0.87
HSPG2-205ENST00000427897 AMZ1Q400G9 498 aa20.48■□□□□ 0.87
HSPG2-205ENST00000427897 MAP9Q49MG5 647 aa20.48■□□□□ 0.87
HSPG2-205ENST00000427897 SIRPB2Q5JXA9 342 aa20.48■□□□□ 0.87
HSPG2-205ENST00000427897 PDPK2PQ6A1A2 396 aa20.48■□□□□ 0.87
HSPG2-205ENST00000427897 KDELC1Q6UW63 502 aa20.48■□□□□ 0.87
HSPG2-205ENST00000427897 PHYKPLQ8IUZ5 450 aa20.48■□□□□ 0.87
HSPG2-205ENST00000427897 TMEM139Q8IV31 216 aa20.48■□□□□ 0.87
HSPG2-205ENST00000427897 SFTPA2Q8IWL1 248 aa20.48■□□□□ 0.87
HSPG2-205ENST00000427897 ARL14Q8N4G2 192 aa20.48■□□□□ 0.87
HSPG2-205ENST00000427897 LRRC57Q8N9N7 239 aa20.48■□□□□ 0.87
HSPG2-205ENST00000427897 TTC13Q8NBP0 860 aa20.48■□□□□ 0.87
HSPG2-205ENST00000427897 BLOC1S5Q8TDH9 187 aa20.48■□□□□ 0.87
HSPG2-205ENST00000427897 FAM118BQ9BPY3 351 aa20.48■□□□□ 0.87
HSPG2-205ENST00000427897 TSGA10Q9BZW7 698 aa20.48■□□□□ 0.87
HSPG2-205ENST00000427897 STN1Q9H668 368 aaKnown RBP20.48■□□□□ 0.87
HSPG2-205ENST00000427897 TRIM39Q9HCM9 518 aa20.48■□□□□ 0.87
HSPG2-205ENST00000427897 ARFGAP3Q9NP61 516 aa20.48■□□□□ 0.87
HSPG2-205ENST00000427897 CNOT6Q9ULM6 557 aaKnown RBP20.48■□□□□ 0.87
HSPG2-205ENST00000427897 AAR2Q9Y312 384 aaKnown RBP20.48■□□□□ 0.87
HSPG2-205ENST00000427897 PKP3Q9Y446 797 aa20.48■□□□□ 0.87
HSPG2-205ENST00000427897 OAS3Q9Y6K5 1087 aaKnown RBP20.48■□□□□ 0.87
HSPG2-205ENST00000427897 KMT2BQ9UMN6 2715 aaPredicted RBP20.48■□□□□ 0.87
HSPG2-205ENST00000427897 ASPMQ8IZT6 3477 aa20.47■□□□□ 0.87
HSPG2-205ENST00000427897 D6RAR5 112 aa20.47■□□□□ 0.87
HSPG2-205ENST00000427897 GRID2O43424 1007 aa20.47■□□□□ 0.87
HSPG2-205ENST00000427897 TLX3O43711 291 aaPredicted RBP20.47■□□□□ 0.87
HSPG2-205ENST00000427897 KRT86O43790 486 aa20.47■□□□□ 0.87
HSPG2-205ENST00000427897 NRDCO43847 1150 aa20.47■□□□□ 0.87
HSPG2-205ENST00000427897 SNX2O60749 519 aa20.47■□□□□ 0.87
HSPG2-205ENST00000427897 EIF2S3P41091 472 aaKnown RBP20.47■□□□□ 0.87
HSPG2-205ENST00000427897 ZDHHC20Q5W0Z9 365 aa20.47■□□□□ 0.87
HSPG2-205ENST00000427897 AADACL2Q6P093 401 aa20.47■□□□□ 0.87
HSPG2-205ENST00000427897 GLT6D1Q7Z4J2 308 aa20.47■□□□□ 0.87
HSPG2-205ENST00000427897 SPRED1Q7Z699 444 aa20.47■□□□□ 0.87
HSPG2-205ENST00000427897 PIM3Q86V86 326 aa20.47■□□□□ 0.87
HSPG2-205ENST00000427897 GLYATL1Q969I3 302 aa20.47■□□□□ 0.87
HSPG2-205ENST00000427897 EID2BQ96D98 161 aa20.47■□□□□ 0.87
HSPG2-205ENST00000427897 NAF1Q96HR8 494 aaKnown RBP20.47■□□□□ 0.87
HSPG2-205ENST00000427897 MRGPRX2Q96LB1 330 aa20.47■□□□□ 0.87
HSPG2-205ENST00000427897 TTC25Q96NG3 672 aa20.47■□□□□ 0.87
HSPG2-205ENST00000427897 FOXP3Q9BZS1 431 aa20.47■□□□□ 0.87
HSPG2-205ENST00000427897 OR2AG1Q9H205 316 aa20.47■□□□□ 0.87
HSPG2-205ENST00000427897 GBA3Q9H227 469 aa20.47■□□□□ 0.87
HSPG2-205ENST00000427897 CARD9Q9H257 536 aa20.47■□□□□ 0.87
HSPG2-205ENST00000427897 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.47■□□□□ 0.87
HSPG2-205ENST00000427897 AKAP7Q9P0M2 348 aaPredicted RBP20.47■□□□□ 0.87
HSPG2-205ENST00000427897 ATXN7L1Q9ULK2 861 aaPredicted RBP20.47■□□□□ 0.87
HSPG2-205ENST00000427897 PACSIN2Q9UNF0 486 aaPredicted RBP20.47■□□□□ 0.87
HSPG2-205ENST00000427897 SPO11Q9Y5K1 396 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms