RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 SMURF1Q9HCE7 757 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 EQTNQ9NQ60 294 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 TRPV5Q9NQA5 729 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 TRMT13Q9NUP7 481 aaKnown RBP5.71□□□□□ -1.5
HERC4-206ENST00000427635 OR12D3Q9UGF7 316 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 EFR3BQ9Y2G0 817 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 PCDHGA3Q9Y5H0 932 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 CLCA3PQ9Y6N3 262 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 LIN7AO14910 233 aaPredicted RBP5.71□□□□□ -1.5
HERC4-206ENST00000427635 PER1O15534 1290 aaPredicted RBP5.71□□□□□ -1.5
HERC4-206ENST00000427635 DUSP11O75319 330 aaKnown RBP5.71□□□□□ -1.5
HERC4-206ENST00000427635 VAPBO95292 243 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 FAUP35544 74 aaKnown RBP5.71□□□□□ -1.5
HERC4-206ENST00000427635 ECH1Q13011 328 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 CRHR2Q13324 411 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 SLC9B1Q4ZJI4 515 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 SPANXN2Q5MJ10 180 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 ZNF720Q7Z2F6 126 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 TOP6BLQ8N6T0 577 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 SIDT2Q8NBJ9 832 aaKnown RBP5.71□□□□□ -1.5
HERC4-206ENST00000427635 ITFG1Q8TB96 612 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 ZCCHC10Q8TBK6 192 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 HEPHQ9BQS7 1158 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 BTBD1Q9H0C5 482 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 MRM3Q9HC36 420 aaKnown RBP5.71□□□□□ -1.5
HERC4-206ENST00000427635 ANKHQ9HCJ1 492 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 CCNB1IP1Q9NPC3 277 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 IL36AQ9UHA7 158 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 CROTQ9UKG9 612 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 SAMD4AQ9UPU9 718 aaKnown RBP5.71□□□□□ -1.5
HERC4-206ENST00000427635 SNX13Q9Y5W8 968 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 CEMIPQ8WUJ3 1361 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 RRP8O43159 456 aaKnown RBP5.71□□□□□ -1.5
HERC4-206ENST00000427635 TXNL1O43396 289 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 OR7A10O76100 309 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 MT-ND5P03915 603 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 NR2C1P13056 603 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 CHRNB4P30926 498 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 EIF2S3P41091 472 aaKnown RBP5.71□□□□□ -1.5
HERC4-206ENST00000427635 C1QTNF8P60827 252 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 MRPS5P82675 430 aaKnown RBP5.71□□□□□ -1.5
HERC4-206ENST00000427635 NFATC2Q13469 925 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 ADRM1Q16186 407 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 PARP6Q2NL67 630 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 FNBP1LQ5T0N5 605 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 UBXN11Q5T124 520 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 PYHIN1Q6K0P9 492 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 SLC30A6Q6NXT4 461 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 CYP2U1Q7Z449 544 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 SLC22A18Q96BI1 424 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 EXOC2Q96KP1 924 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 NSMCE3Q96MG7 304 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 AARSD1Q9BTE6 412 aaKnown RBP5.71□□□□□ -1.5
HERC4-206ENST00000427635 RTFDC1Q9BY42 306 aaPredicted RBP5.71□□□□□ -1.5
HERC4-206ENST00000427635 TOR4AQ9NXH8 423 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 QPCTLQ9NXS2 382 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 IKZF2Q9UKS7 526 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 FZD1Q9UP38 647 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 SPATA31D1Q6ZQQ2 1576 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 CCDC162PA2VCL2 907 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 ICMTO60725 284 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 C8AP07357 584 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 CHRNGP07510 517 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 ALPIP09923 528 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 SLC1A6P48664 564 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 CAV3P56539 151 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 PPA1Q15181 289 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 RFTN2Q52LD8 501 aaPredicted RBP5.71□□□□□ -1.5
HERC4-206ENST00000427635 PIK3R6Q5UE93 754 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 LCN1P1Q5VSP4 162 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 TAPT1Q6NXT6 567 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 DEF8Q6ZN54 512 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 MSANTD1Q6ZTZ1 278 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 C3orf67Q6ZVT6 689 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 EMC1Q8N766 993 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 C1orf216Q8TAB5 229 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 SLC9A6Q92581 669 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 TEKT5Q96M29 485 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 CEP41Q9BYV8 373 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 IL22Q9GZX6 179 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 METTL7AQ9H8H3 244 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 MRPS30Q9NP92 439 aaKnown RBP5.71□□□□□ -1.5
HERC4-206ENST00000427635 RDH8Q9NYR8 311 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 LRFN1Q9P244 771 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 SNX7Q9UNH6 387 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 CFL2Q9Y281 166 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 DERAQ9Y315 318 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 TSC22D4Q9Y3Q8 395 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 ACOT7O00154 380 aa5.7□□□□□ -1.5
HERC4-206ENST00000427635 SLC37A4O43826 429 aa5.7□□□□□ -1.5
HERC4-206ENST00000427635 RECQL5O94762 991 aaPredicted RBP5.7□□□□□ -1.5
HERC4-206ENST00000427635 OR5F1O95221 314 aa5.7□□□□□ -1.5
HERC4-206ENST00000427635 PGLSO95336 258 aa5.7□□□□□ -1.5
HERC4-206ENST00000427635 TRUB2O95900 331 aaKnown RBP5.7□□□□□ -1.5
HERC4-206ENST00000427635 OTCP00480 354 aa5.7□□□□□ -1.5
HERC4-206ENST00000427635 ETS1P14921 441 aa5.7□□□□□ -1.5
HERC4-206ENST00000427635 PPIBP23284 216 aaKnown RBP5.7□□□□□ -1.5
HERC4-206ENST00000427635 LRPAP1P30533 357 aa5.7□□□□□ -1.5
HERC4-206ENST00000427635 MC4RP32245 332 aa5.7□□□□□ -1.5
HERC4-206ENST00000427635 GP5P40197 560 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms