RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 TRNT1Q96Q11 434 aaKnown RBP17.88■□□□□ 0.45
ARHGEF28-203ENST00000426542 HOPXQ9BPY8 73 aaPredicted RBP17.88■□□□□ 0.45
ARHGEF28-203ENST00000426542 COL5A2P05997 1499 aaPredicted RBP17.88■□□□□ 0.45
ARHGEF28-203ENST00000426542 IQGAP1P46940 1657 aa17.88■□□□□ 0.45
ARHGEF28-203ENST00000426542 DHX15O43143 795 aaKnown RBP17.88■□□□□ 0.45
ARHGEF28-203ENST00000426542 C1RP00736 705 aa17.88■□□□□ 0.45
ARHGEF28-203ENST00000426542 PTPN20Q4JDL3 420 aa17.88■□□□□ 0.45
ARHGEF28-203ENST00000426542 LRTM1Q9HBL6 345 aa17.88■□□□□ 0.45
ARHGEF28-203ENST00000426542 CCNB1IP1Q9NPC3 277 aa17.88■□□□□ 0.45
ARHGEF28-203ENST00000426542 CNOT6Q9ULM6 557 aaKnown RBP17.88■□□□□ 0.45
ARHGEF28-203ENST00000426542 MAGEB3O15480 346 aa17.88■□□□□ 0.45
ARHGEF28-203ENST00000426542 NR2F6P10588 404 aa17.88■□□□□ 0.45
ARHGEF28-203ENST00000426542 MTHFRP42898 656 aa17.88■□□□□ 0.45
ARHGEF28-203ENST00000426542 STARP49675 285 aa17.88■□□□□ 0.45
ARHGEF28-203ENST00000426542 TEX44Q53QW1 395 aa17.88■□□□□ 0.45
ARHGEF28-203ENST00000426542 GSTCDQ8NEC7 633 aa17.88■□□□□ 0.45
ARHGEF28-203ENST00000426542 TDRD1Q9BXT4 1180 aaKnown RBP17.88■□□□□ 0.45
ARHGEF28-203ENST00000426542 DSN1Q9H410 356 aa17.88■□□□□ 0.45
ARHGEF28-203ENST00000426542 NOL11Q9H8H0 719 aaKnown RBP17.88■□□□□ 0.45
ARHGEF28-203ENST00000426542 LRRC4CQ9HCJ2 640 aa17.88■□□□□ 0.45
ARHGEF28-203ENST00000426542 OSER1Q9NX31 292 aa17.88■□□□□ 0.45
ARHGEF28-203ENST00000426542 PCDHB1Q9Y5F3 818 aa17.88■□□□□ 0.45
ARHGEF28-203ENST00000426542 FPGTO14772 594 aa17.88■□□□□ 0.45
ARHGEF28-203ENST00000426542 PGRMC2O15173 223 aa17.88■□□□□ 0.45
ARHGEF28-203ENST00000426542 CRHR1P34998 444 aa17.88■□□□□ 0.45
ARHGEF28-203ENST00000426542 POLR2JP52435 117 aaKnown RBP17.88■□□□□ 0.45
ARHGEF28-203ENST00000426542 ARSHQ5FYA8 562 aa17.88■□□□□ 0.45
ARHGEF28-203ENST00000426542 RNASE12Q5GAN4 147 aaKnown RBP17.88■□□□□ 0.45
ARHGEF28-203ENST00000426542 KLHL35Q6PF15 583 aa17.88■□□□□ 0.45
ARHGEF28-203ENST00000426542 ZNF730Q6ZMV8 503 aa17.88■□□□□ 0.45
ARHGEF28-203ENST00000426542 BEND7Q8N7W2 519 aaPredicted RBP17.88■□□□□ 0.45
ARHGEF28-203ENST00000426542 NECTIN3Q9NQS3 549 aa17.88■□□□□ 0.45
ARHGEF28-203ENST00000426542 DNAJC11Q9NVH1 559 aa17.88■□□□□ 0.45
ARHGEF28-203ENST00000426542 C2orf71A6NGG8 1288 aa17.88■□□□□ 0.45
ARHGEF28-203ENST00000426542 FFAR2O15552 330 aa17.88■□□□□ 0.45
ARHGEF28-203ENST00000426542 GIMD1P0DJR0 217 aa17.88■□□□□ 0.45
ARHGEF28-203ENST00000426542 PIK3R6Q5UE93 754 aa17.88■□□□□ 0.45
ARHGEF28-203ENST00000426542 FBXO42Q6P3S6 717 aa17.88■□□□□ 0.45
ARHGEF28-203ENST00000426542 SPPL2CQ8IUH8 684 aa17.88■□□□□ 0.45
ARHGEF28-203ENST00000426542 HIPK3Q9H422 1215 aa17.88■□□□□ 0.45
ARHGEF28-203ENST00000426542 ARL8BQ9NVJ2 186 aa17.88■□□□□ 0.45
ARHGEF28-203ENST00000426542 CD84Q9UIB8 345 aa17.88■□□□□ 0.45
ARHGEF28-203ENST00000426542 ING4Q9UNL4 249 aa17.88■□□□□ 0.45
ARHGEF28-203ENST00000426542 TRBV23OR9-2A0A075B6M9 112 aa17.87■□□□□ 0.45
ARHGEF28-203ENST00000426542 H3BM21 787 aa17.87■□□□□ 0.45
ARHGEF28-203ENST00000426542 UGT2B11O75310 529 aa17.87■□□□□ 0.45
ARHGEF28-203ENST00000426542 UGT2B4P06133 528 aa17.87■□□□□ 0.45
ARHGEF28-203ENST00000426542 WASP42768 502 aa17.87■□□□□ 0.45
ARHGEF28-203ENST00000426542 CTSKP43235 329 aa17.87■□□□□ 0.45
ARHGEF28-203ENST00000426542 CAMK1Q14012 370 aa17.87■□□□□ 0.45
ARHGEF28-203ENST00000426542 CHST9Q7L1S5 443 aa17.87■□□□□ 0.45
ARHGEF28-203ENST00000426542 SPPL2BQ8TCT7 592 aa17.87■□□□□ 0.45
ARHGEF28-203ENST00000426542 KREMEN1Q96MU8 473 aa17.87■□□□□ 0.45
ARHGEF28-203ENST00000426542 DEFB118Q96PH6 123 aa17.87■□□□□ 0.45
ARHGEF28-203ENST00000426542 CPXM1Q96SM3 734 aa17.87■□□□□ 0.45
ARHGEF28-203ENST00000426542 CASKO14936 926 aa17.87■□□□□ 0.45
ARHGEF28-203ENST00000426542 TMEM63BQ5T3F8 832 aa17.87■□□□□ 0.45
ARHGEF28-203ENST00000426542 AAGABQ6PD74 315 aa17.87■□□□□ 0.45
ARHGEF28-203ENST00000426542 RALGPS2Q86X27 583 aaPredicted RBP17.87■□□□□ 0.45
ARHGEF28-203ENST00000426542 PJA1Q8NG27 643 aa17.87■□□□□ 0.45
ARHGEF28-203ENST00000426542 IKZF4Q9H2S9 585 aa17.87■□□□□ 0.45
ARHGEF28-203ENST00000426542 ERVK-5Q9HDB9 667 aa17.87■□□□□ 0.45
ARHGEF28-203ENST00000426542 PHPT1Q9NRX4 125 aaPredicted RBP17.87■□□□□ 0.45
ARHGEF28-203ENST00000426542 CIDEBQ9UHD4 219 aa17.87■□□□□ 0.45
ARHGEF28-203ENST00000426542 PRKAB1Q9Y478 270 aa17.87■□□□□ 0.45
ARHGEF28-203ENST00000426542 EDF1O60869 148 aaKnown RBP17.87■□□□□ 0.45
ARHGEF28-203ENST00000426542 ITGA7Q13683 1181 aa17.87■□□□□ 0.45
ARHGEF28-203ENST00000426542 GRB14Q14449 540 aa17.87■□□□□ 0.45
ARHGEF28-203ENST00000426542 POP5Q969H6 163 aaKnown RBP17.87■□□□□ 0.45
ARHGEF28-203ENST00000426542 GPR20Q99678 358 aa17.87■□□□□ 0.45
ARHGEF28-203ENST00000426542 PLGRKTQ9HBL7 147 aa17.87■□□□□ 0.45
ARHGEF28-203ENST00000426542 CCDC162PA2VCL2 907 aa17.87■□□□□ 0.45
ARHGEF28-203ENST00000426542 STBD1O95210 358 aa17.87■□□□□ 0.45
ARHGEF28-203ENST00000426542 PKMP14618 531 aaKnown RBP17.87■□□□□ 0.45
ARHGEF28-203ENST00000426542 PTPN9P43378 593 aa17.87■□□□□ 0.45
ARHGEF28-203ENST00000426542 BNC1Q01954 994 aa17.87■□□□□ 0.45
ARHGEF28-203ENST00000426542 ZNF846Q147U1 533 aa17.87■□□□□ 0.45
ARHGEF28-203ENST00000426542 SUZ12Q15022 739 aaKnown RBP17.87■□□□□ 0.45
ARHGEF28-203ENST00000426542 CLEC4AQ9UMR7 237 aa17.87■□□□□ 0.45
ARHGEF28-203ENST00000426542 SRRM3A6NNA2 597 aaPredicted RBP17.86■□□□□ 0.45
ARHGEF28-203ENST00000426542 IPO13O94829 963 aaKnown RBP17.86■□□□□ 0.45
ARHGEF28-203ENST00000426542 ITGA3P26006 1051 aa17.86■□□□□ 0.45
ARHGEF28-203ENST00000426542 ADRA1BP35368 520 aa17.86■□□□□ 0.45
ARHGEF28-203ENST00000426542 SPAM1P38567 509 aa17.86■□□□□ 0.45
ARHGEF28-203ENST00000426542 ABHD15Q6UXT9 468 aa17.86■□□□□ 0.45
ARHGEF28-203ENST00000426542 GPR135Q8IZ08 494 aa17.86■□□□□ 0.45
ARHGEF28-203ENST00000426542 CPSF7Q8N684 471 aaKnown RBP17.86■□□□□ 0.45
ARHGEF28-203ENST00000426542 WDR60Q8WVS4 1066 aa17.86■□□□□ 0.45
ARHGEF28-203ENST00000426542 NXNL1Q96CM4 212 aa17.86■□□□□ 0.45
ARHGEF28-203ENST00000426542 SEC14L3Q9UDX4 400 aa17.86■□□□□ 0.45
ARHGEF28-203ENST00000426542 IRGMA1A4Y4 181 aa17.86■□□□□ 0.45
ARHGEF28-203ENST00000426542 GNPDA1P46926 289 aa17.86■□□□□ 0.45
ARHGEF28-203ENST00000426542 RFWD3Q6PCD5 774 aa17.86■□□□□ 0.45
ARHGEF28-203ENST00000426542 FAM131AQ6UXB0 335 aa17.86■□□□□ 0.45
ARHGEF28-203ENST00000426542 PDP1Q9P0J1 537 aaPredicted RBP17.86■□□□□ 0.45
ARHGEF28-203ENST00000426542 IRAK3Q9Y616 596 aa17.86■□□□□ 0.45
ARHGEF28-203ENST00000426542 TRAFD1O14545 582 aaPredicted RBP17.86■□□□□ 0.45
ARHGEF28-203ENST00000426542 CACNG1Q06432 222 aa17.86■□□□□ 0.45
ARHGEF28-203ENST00000426542 SMARCB1Q12824 385 aa17.86■□□□□ 0.45
ARHGEF28-203ENST00000426542 LINGO4Q6UY18 593 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms