RNA–Protein interactions for RNA: ENST00000424265.5

USP54-205, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 5,201 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-205ENST00000424265 RPL35P42766 123 aaKnown RBP9.78□□□□□ -0.84
USP54-205ENST00000424265 DRG2P55039 364 aaKnown RBP9.78□□□□□ -0.84
USP54-205ENST00000424265 DBPQ10586 325 aaPredicted RBP9.78□□□□□ -0.84
USP54-205ENST00000424265 GPR17Q13304 367 aa9.78□□□□□ -0.84
USP54-205ENST00000424265 ZNF704Q6ZNC4 412 aaPredicted RBP9.78□□□□□ -0.84
USP54-205ENST00000424265 GPR65Q8IYL9 337 aa9.78□□□□□ -0.84
USP54-205ENST00000424265 DNAAF3Q8N9W5 541 aa9.78□□□□□ -0.84
USP54-205ENST00000424265 SCYL1Q96KG9 808 aa9.78□□□□□ -0.84
USP54-205ENST00000424265 RPRD1AQ96P16 312 aaPredicted RBP9.78□□□□□ -0.84
USP54-205ENST00000424265 MCMBPQ9BTE3 642 aa9.78□□□□□ -0.84
USP54-205ENST00000424265 STN1Q9H668 368 aaKnown RBP9.78□□□□□ -0.84
USP54-205ENST00000424265 CCDC182A6NF36 153 aa9.78□□□□□ -0.84
USP54-205ENST00000424265 GALTP07902 379 aa9.78□□□□□ -0.84
USP54-205ENST00000424265 CTGFP29279 349 aa9.78□□□□□ -0.84
USP54-205ENST00000424265 UQCRC1P31930 480 aa9.78□□□□□ -0.84
USP54-205ENST00000424265 GDI2P50395 445 aaKnown RBP9.78□□□□□ -0.84
USP54-205ENST00000424265 C19orf57Q0VDD7 668 aa9.78□□□□□ -0.84
USP54-205ENST00000424265 SPOCD1Q6ZMY3 1216 aa9.78□□□□□ -0.84
USP54-205ENST00000424265 MON1BQ7L1V2 547 aa9.78□□□□□ -0.84
USP54-205ENST00000424265 DSG4Q86SJ6 1040 aa9.78□□□□□ -0.84
USP54-205ENST00000424265 DDX53Q86TM3 631 aaKnown RBP9.78□□□□□ -0.84
USP54-205ENST00000424265 COLGALT1Q8NBJ5 622 aa9.78□□□□□ -0.84
USP54-205ENST00000424265 OR10Z1Q8NGY1 313 aa9.78□□□□□ -0.84
USP54-205ENST00000424265 MSANTD3Q96H12 275 aa9.78□□□□□ -0.84
USP54-205ENST00000424265 VPS39Q96JC1 886 aa9.78□□□□□ -0.84
USP54-205ENST00000424265 CRISPLD2Q9H0B8 497 aa9.78□□□□□ -0.84
USP54-205ENST00000424265 MUC3BQ9H195 1237 aa9.78□□□□□ -0.84
USP54-205ENST00000424265 SAYSD1Q9NPB0 183 aa9.78□□□□□ -0.84
USP54-205ENST00000424265 DZANK1Q9NVP4 752 aa9.78□□□□□ -0.84
USP54-205ENST00000424265 SUCOQ9UBS9 1254 aaKnown RBP9.78□□□□□ -0.84
USP54-205ENST00000424265 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.78□□□□□ -0.84
USP54-205ENST00000424265 PLCL2Q9UPR0 1127 aa9.78□□□□□ -0.84
USP54-205ENST00000424265 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.78□□□□□ -0.84
USP54-205ENST00000424265 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.78□□□□□ -0.84
USP54-205ENST00000424265 KRT87PA6NCN2 255 aa9.78□□□□□ -0.84
USP54-205ENST00000424265 BTN3A1O00481 513 aa9.78□□□□□ -0.84
USP54-205ENST00000424265 USP17L7P0C7H9 530 aa9.78□□□□□ -0.84
USP54-205ENST00000424265 ZNF182P17025 639 aaPredicted RBP9.78□□□□□ -0.84
USP54-205ENST00000424265 PRKAA2P54646 552 aa9.78□□□□□ -0.84
USP54-205ENST00000424265 CDH18Q13634 790 aa9.78□□□□□ -0.84
USP54-205ENST00000424265 CACHD1Q5VU97 1274 aa9.78□□□□□ -0.84
USP54-205ENST00000424265 DNAAF5Q86Y56 855 aa9.78□□□□□ -0.84
USP54-205ENST00000424265 SCUBE3Q8IX30 993 aa9.78□□□□□ -0.84
USP54-205ENST00000424265 BADQ92934 168 aa9.78□□□□□ -0.84
USP54-205ENST00000424265 GAL3ST1Q99999 423 aa9.78□□□□□ -0.84
USP54-205ENST00000424265 CYP4F12Q9HCS2 524 aa9.78□□□□□ -0.84
USP54-205ENST00000424265 ZNF236Q9UL36 1845 aa9.78□□□□□ -0.84
USP54-205ENST00000424265 CAPN14A8MX76 684 aa9.77□□□□□ -0.84
USP54-205ENST00000424265 PLD2O14939 933 aa9.77□□□□□ -0.84
USP54-205ENST00000424265 CST8O60676 142 aa9.77□□□□□ -0.84
USP54-205ENST00000424265 CPNE3O75131 537 aaKnown RBP9.77□□□□□ -0.84
USP54-205ENST00000424265 TRUB2O95900 331 aaKnown RBP9.77□□□□□ -0.84
USP54-205ENST00000424265 RENBPP51606 427 aa9.77□□□□□ -0.84
USP54-205ENST00000424265 SLC25A52Q3SY17 297 aa9.77□□□□□ -0.84
USP54-205ENST00000424265 FAM209BQ5JX69 171 aa9.77□□□□□ -0.84
USP54-205ENST00000424265 ALYREFQ86V81 257 aaKnown RBP9.77□□□□□ -0.84
USP54-205ENST00000424265 FSD1LQ9BXM9 530 aa9.77□□□□□ -0.84
USP54-205ENST00000424265 TMEM168Q9H0V1 697 aa9.77□□□□□ -0.84
USP54-205ENST00000424265 ING2Q9H160 280 aa9.77□□□□□ -0.84
USP54-205ENST00000424265 XYLT2Q9H1B5 865 aa9.77□□□□□ -0.84
USP54-205ENST00000424265 PPCSQ9HAB8 311 aa9.77□□□□□ -0.84
USP54-205ENST00000424265 TIGARQ9NQ88 270 aa9.77□□□□□ -0.84
USP54-205ENST00000424265 ING3Q9NXR8 418 aa9.77□□□□□ -0.84
USP54-205ENST00000424265 SLC24A2Q9UI40 661 aa9.77□□□□□ -0.84
USP54-205ENST00000424265 SNX7Q9UNH6 387 aa9.77□□□□□ -0.84
USP54-205ENST00000424265 CNTN6Q9UQ52 1028 aa9.77□□□□□ -0.84
USP54-205ENST00000424265 MEN1O00255 615 aa9.77□□□□□ -0.85
USP54-205ENST00000424265 PIM1P11309 404 aaPredicted RBP9.77□□□□□ -0.85
USP54-205ENST00000424265 RPP38P78345 283 aaKnown RBP9.77□□□□□ -0.85
USP54-205ENST00000424265 MRPS22P82650 360 aaKnown RBP9.77□□□□□ -0.85
USP54-205ENST00000424265 GPM6BQ13491 265 aa9.77□□□□□ -0.85
USP54-205ENST00000424265 APOFQ13790 326 aa9.77□□□□□ -0.85
USP54-205ENST00000424265 ZNF425Q6IV72 752 aa9.77□□□□□ -0.85
USP54-205ENST00000424265 TBC1D19Q8N5T2 526 aa9.77□□□□□ -0.85
USP54-205ENST00000424265 REXO5Q96IC2 774 aaKnown RBP9.77□□□□□ -0.85
USP54-205ENST00000424265 MAGED4Q96JG8 741 aa9.77□□□□□ -0.85
USP54-205ENST00000424265 VAT1Q99536 393 aa9.77□□□□□ -0.85
USP54-205ENST00000424265 SPON2Q9BUD6 331 aa9.77□□□□□ -0.85
USP54-205ENST00000424265 CPNE5Q9HCH3 593 aa9.77□□□□□ -0.85
USP54-205ENST00000424265 POLE4Q9NR33 117 aa9.77□□□□□ -0.85
USP54-205ENST00000424265 MBD2Q9UBB5 411 aa9.77□□□□□ -0.85
USP54-205ENST00000424265 DGKBQ9Y6T7 804 aa9.77□□□□□ -0.85
USP54-205ENST00000424265 HOXC8P31273 242 aa9.77□□□□□ -0.85
USP54-205ENST00000424265 CDH5P33151 784 aaPredicted RBP9.77□□□□□ -0.85
USP54-205ENST00000424265 CDH15P55291 814 aa9.77□□□□□ -0.85
USP54-205ENST00000424265 FAM189BP81408 668 aa9.77□□□□□ -0.85
USP54-205ENST00000424265 PTP4A2Q12974 167 aa9.77□□□□□ -0.85
USP54-205ENST00000424265 BNIP2Q12982 314 aa9.77□□□□□ -0.85
USP54-205ENST00000424265 CDK10Q15131 360 aa9.77□□□□□ -0.85
USP54-205ENST00000424265 CCNG2Q16589 344 aa9.77□□□□□ -0.85
USP54-205ENST00000424265 SLX4IPQ5VYV7 408 aa9.77□□□□□ -0.85
USP54-205ENST00000424265 BNC2Q6ZN30 1099 aaPredicted RBP9.77□□□□□ -0.85
USP54-205ENST00000424265 SLCO6A1Q86UG4 719 aa9.77□□□□□ -0.85
USP54-205ENST00000424265 PLD3Q8IV08 490 aa9.77□□□□□ -0.85
USP54-205ENST00000424265 TMEM151BQ8IW70 566 aa9.77□□□□□ -0.85
USP54-205ENST00000424265 ZC3H7AQ8IWR0 971 aaKnown RBP9.77□□□□□ -0.85
USP54-205ENST00000424265 TFB1MQ8WVM0 346 aaKnown RBP9.77□□□□□ -0.85
USP54-205ENST00000424265 ATP6V1E2Q96A05 226 aa9.77□□□□□ -0.85
USP54-205ENST00000424265 PCED1BQ96HM7 432 aa9.77□□□□□ -0.85
USP54-205ENST00000424265 TCF25Q9BQ70 676 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms