RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 K7ESM1 405 aa12.4□□□□□ -0.42
TMEM53-206ENST00000420706 GPR39O43194 453 aa12.4□□□□□ -0.42
TMEM53-206ENST00000420706 HRO43593 1189 aa12.4□□□□□ -0.42
TMEM53-206ENST00000420706 S1PR4O95977 384 aa12.4□□□□□ -0.42
TMEM53-206ENST00000420706 SHBGP04278 402 aa12.4□□□□□ -0.42
TMEM53-206ENST00000420706 PCCBP05166 539 aa12.4□□□□□ -0.42
TMEM53-206ENST00000420706 PYGLP06737 847 aa12.4□□□□□ -0.42
TMEM53-206ENST00000420706 NUDT17P0C025 328 aa12.4□□□□□ -0.42
TMEM53-206ENST00000420706 SP9P0CG40 484 aa12.4□□□□□ -0.42
TMEM53-206ENST00000420706 OGNP20774 298 aaKnown RBP12.4□□□□□ -0.42
TMEM53-206ENST00000420706 TEAD1P28347 426 aa12.4□□□□□ -0.42
TMEM53-206ENST00000420706 NUDT1P36639 197 aa12.4□□□□□ -0.42
TMEM53-206ENST00000420706 NUBP1P53384 320 aa12.4□□□□□ -0.42
TMEM53-206ENST00000420706 RPL6Q02878 288 aaKnown RBP12.4□□□□□ -0.42
TMEM53-206ENST00000420706 CTBP1Q13363 440 aa12.4□□□□□ -0.42
TMEM53-206ENST00000420706 NFATC2Q13469 925 aa12.4□□□□□ -0.42
TMEM53-206ENST00000420706 STAT4Q14765 748 aa12.4□□□□□ -0.42
TMEM53-206ENST00000420706 EFTUD2Q15029 972 aaKnown RBP eCLIP12.4□□□□□ -0.42
TMEM53-206ENST00000420706 IRF4Q15306 451 aa12.4□□□□□ -0.42
TMEM53-206ENST00000420706 ANGPT1Q15389 498 aa12.4□□□□□ -0.42
TMEM53-206ENST00000420706 ZNF528Q3MIS6 628 aa12.4□□□□□ -0.42
TMEM53-206ENST00000420706 RAET1GQ6H3X3 334 aa12.4□□□□□ -0.42
TMEM53-206ENST00000420706 MRNIPQ6NTE8 343 aa12.4□□□□□ -0.42
TMEM53-206ENST00000420706 SDCCAG8Q86SQ7 713 aaPredicted RBP12.4□□□□□ -0.42
TMEM53-206ENST00000420706 SERPINA9Q86WD7 417 aa12.4□□□□□ -0.42
TMEM53-206ENST00000420706 CILP2Q8IUL8 1156 aa12.4□□□□□ -0.42
TMEM53-206ENST00000420706 DENND6AQ8IWF6 608 aa12.4□□□□□ -0.42
TMEM53-206ENST00000420706 CTAGE3PQ8IX95 158 aa12.4□□□□□ -0.42
TMEM53-206ENST00000420706 IQCKQ8N0W5 287 aa12.4□□□□□ -0.42
TMEM53-206ENST00000420706 C2CD4AQ8NCU7 369 aaPredicted RBP12.4□□□□□ -0.42
TMEM53-206ENST00000420706 DENND6BQ8NEG7 585 aa12.4□□□□□ -0.42
TMEM53-206ENST00000420706 GABPB2Q8TAK5 448 aaPredicted RBP12.4□□□□□ -0.42
TMEM53-206ENST00000420706 BTN2A2Q8WVV5 523 aa12.4□□□□□ -0.42
TMEM53-206ENST00000420706 GAB3Q8WWW8 586 aa12.4□□□□□ -0.42
TMEM53-206ENST00000420706 ULK4Q96C45 1275 aa12.4□□□□□ -0.42
TMEM53-206ENST00000420706 ORAI3Q9BRQ5 295 aa12.4□□□□□ -0.42
TMEM53-206ENST00000420706 FAM167BQ9BTA0 163 aa12.4□□□□□ -0.42
TMEM53-206ENST00000420706 FZD3Q9NPG1 666 aa12.4□□□□□ -0.42
TMEM53-206ENST00000420706 ZFATQ9P243 1243 aa12.4□□□□□ -0.42
TMEM53-206ENST00000420706 VPS18Q9P253 973 aa12.4□□□□□ -0.42
TMEM53-206ENST00000420706 SLC17A6Q9P2U8 582 aa12.4□□□□□ -0.42
TMEM53-206ENST00000420706 CRLS1Q9UJA2 301 aa12.4□□□□□ -0.42
TMEM53-206ENST00000420706 FBXO5Q9UKT4 447 aa12.4□□□□□ -0.42
TMEM53-206ENST00000420706 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.4□□□□□ -0.42
TMEM53-206ENST00000420706 CUL9Q8IWT3 2517 aa12.4□□□□□ -0.42
TMEM53-206ENST00000420706 CEP192Q8TEP8 1941 aa12.39□□□□□ -0.43
TMEM53-206ENST00000420706 PLXNB3Q9ULL4 1909 aa12.39□□□□□ -0.43
TMEM53-206ENST00000420706 A0A1W2PPC4 97 aa12.39□□□□□ -0.43
TMEM53-206ENST00000420706 AHSGP02765 367 aa12.39□□□□□ -0.43
TMEM53-206ENST00000420706 F7P08709 466 aaPredicted RBP12.39□□□□□ -0.43
TMEM53-206ENST00000420706 HNRNPA2B1P22626 353 aaKnown RBP12.39□□□□□ -0.43
TMEM53-206ENST00000420706 ACRV1P26436 265 aa12.39□□□□□ -0.43
TMEM53-206ENST00000420706 GABRB3P28472 473 aa12.39□□□□□ -0.43
TMEM53-206ENST00000420706 IGFALSP35858 605 aa12.39□□□□□ -0.43
TMEM53-206ENST00000420706 TRIM23P36406 574 aa12.39□□□□□ -0.43
TMEM53-206ENST00000420706 SLC1A2P43004 574 aa12.39□□□□□ -0.43
TMEM53-206ENST00000420706 LEPRP48357 1165 aaKnown RBP12.39□□□□□ -0.43
TMEM53-206ENST00000420706 MPP1Q00013 466 aa12.39□□□□□ -0.43
TMEM53-206ENST00000420706 SRSF5Q13243 272 aaKnown RBP12.39□□□□□ -0.43
TMEM53-206ENST00000420706 NAB1Q13506 487 aa12.39□□□□□ -0.43
TMEM53-206ENST00000420706 INPP5AQ14642 412 aa12.39□□□□□ -0.43
TMEM53-206ENST00000420706 CASP8Q14790 479 aa12.39□□□□□ -0.43
TMEM53-206ENST00000420706 DBN1Q16643 649 aa12.39□□□□□ -0.43
TMEM53-206ENST00000420706 TYSND1Q2T9J0 566 aa12.39□□□□□ -0.43
TMEM53-206ENST00000420706 KLHL38Q2WGJ6 581 aa12.39□□□□□ -0.43
TMEM53-206ENST00000420706 ZNF789Q5FWF6 425 aa12.39□□□□□ -0.43
TMEM53-206ENST00000420706 LYPLAL1Q5VWZ2 237 aa12.39□□□□□ -0.43
TMEM53-206ENST00000420706 ZNF470Q6ECI4 717 aa12.39□□□□□ -0.43
TMEM53-206ENST00000420706 ADAMTSL4Q6UY14 1074 aa12.39□□□□□ -0.43
TMEM53-206ENST00000420706 CERS6Q6ZMG9 384 aa12.39□□□□□ -0.43
TMEM53-206ENST00000420706 MARK2Q7KZI7 788 aaKnown RBP12.39□□□□□ -0.43
TMEM53-206ENST00000420706 SLC26A11Q86WA9 606 aa12.39□□□□□ -0.43
TMEM53-206ENST00000420706 LRRC6Q86X45 466 aa12.39□□□□□ -0.43
TMEM53-206ENST00000420706 SLC41A1Q8IVJ1 513 aa12.39□□□□□ -0.43
TMEM53-206ENST00000420706 NXPE1Q8N323 547 aa12.39□□□□□ -0.43
TMEM53-206ENST00000420706 OTUD6BQ8N6M0 293 aa12.39□□□□□ -0.43
TMEM53-206ENST00000420706 PPM1NQ8N819 430 aa12.39□□□□□ -0.43
TMEM53-206ENST00000420706 OR2W6PQ8NHA6 318 aa12.39□□□□□ -0.43
TMEM53-206ENST00000420706 SCG3Q8WXD2 468 aaKnown RBP12.39□□□□□ -0.43
TMEM53-206ENST00000420706 GLYATL1Q969I3 302 aa12.39□□□□□ -0.43
TMEM53-206ENST00000420706 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.39□□□□□ -0.43
TMEM53-206ENST00000420706 BMFQ96LC9 184 aa12.39□□□□□ -0.43
TMEM53-206ENST00000420706 VPS35Q96QK1 796 aa12.39□□□□□ -0.43
TMEM53-206ENST00000420706 TCF12Q99081 682 aa12.39□□□□□ -0.43
TMEM53-206ENST00000420706 MYOCQ99972 504 aa12.39□□□□□ -0.43
TMEM53-206ENST00000420706 CCDC77Q9BR77 488 aa12.39□□□□□ -0.43
TMEM53-206ENST00000420706 DUSP15Q9H1R2 295 aaPredicted RBP12.39□□□□□ -0.43
TMEM53-206ENST00000420706 SMOXQ9NWM0 555 aa12.39□□□□□ -0.43
TMEM53-206ENST00000420706 ZSCAN32Q9NX65 697 aa12.39□□□□□ -0.43
TMEM53-206ENST00000420706 NSMCE4AQ9NXX6 385 aa12.39□□□□□ -0.43
TMEM53-206ENST00000420706 ZDHHC3Q9NYG2 299 aa12.39□□□□□ -0.43
TMEM53-206ENST00000420706 DMTF1Q9Y222 760 aa12.39□□□□□ -0.43
TMEM53-206ENST00000420706 PLAAQ9Y263 795 aa12.39□□□□□ -0.43
TMEM53-206ENST00000420706 NFS1Q9Y697 457 aa12.39□□□□□ -0.43
TMEM53-206ENST00000420706 BDP1A6H8Y1 2624 aa12.39□□□□□ -0.43
TMEM53-206ENST00000420706 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.38□□□□□ -0.43
TMEM53-206ENST00000420706 EXOC1LA0A1B0GW35 172 aa12.38□□□□□ -0.43
TMEM53-206ENST00000420706 POC1B-GALNT4F8VUJ3 575 aa12.38□□□□□ -0.43
TMEM53-206ENST00000420706 PRAMEF26H0Y7S4 382 aa12.38□□□□□ -0.43
TMEM53-206ENST00000420706 DYNC1I1O14576 645 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms