RNA–Protein interactions for RNA: ENST00000418800.6

DDR1-232, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene DDR1, Length 3,588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-232ENST00000418800 CNTNAP1P78357 1384 aa11.66□□□□□ -0.54
DDR1-232ENST00000418800 TNS1Q9HBL0 1735 aaKnown RBP11.66□□□□□ -0.54
DDR1-232ENST00000418800 ASB14A6NK59 587 aa11.66□□□□□ -0.54
DDR1-232ENST00000418800 UBXN8O00124 270 aa11.66□□□□□ -0.54
DDR1-232ENST00000418800 PLA2G6O60733 806 aa11.66□□□□□ -0.54
DDR1-232ENST00000418800 PGLSO95336 258 aa11.66□□□□□ -0.54
DDR1-232ENST00000418800 MYCP01106 439 aaPredicted RBP11.66□□□□□ -0.54
DDR1-232ENST00000418800 TGFBR1P36897 503 aa11.66□□□□□ -0.54
DDR1-232ENST00000418800 TRIP4Q15650 581 aaPredicted RBP11.66□□□□□ -0.54
DDR1-232ENST00000418800 ZFP69Q49AA0 526 aa11.66□□□□□ -0.54
DDR1-232ENST00000418800 ATP6AP1LQ52LC2 224 aa11.66□□□□□ -0.54
DDR1-232ENST00000418800 PLEKHG7Q6ZR37 379 aa11.66□□□□□ -0.54
DDR1-232ENST00000418800 ITIH5Q86UX2 942 aa11.66□□□□□ -0.54
DDR1-232ENST00000418800 SCML4Q8N228 414 aa11.66□□□□□ -0.54
DDR1-232ENST00000418800 REPS2Q8NFH8 660 aa11.66□□□□□ -0.54
DDR1-232ENST00000418800 ITFG1Q8TB96 612 aa11.66□□□□□ -0.54
DDR1-232ENST00000418800 FAM162AQ96A26 154 aa11.66□□□□□ -0.54
DDR1-232ENST00000418800 NXF3Q9H4D5 531 aaKnown RBP11.66□□□□□ -0.54
DDR1-232ENST00000418800 ATP13A3Q9H7F0 1226 aa11.66□□□□□ -0.54
DDR1-232ENST00000418800 RGS18Q9NS28 235 aa11.66□□□□□ -0.54
DDR1-232ENST00000418800 PTBP2Q9UKA9 531 aaKnown RBP11.66□□□□□ -0.54
DDR1-232ENST00000418800 PCDHB3Q9Y5E6 796 aa11.66□□□□□ -0.54
DDR1-232ENST00000418800 SLC30A1Q9Y6M5 507 aa11.66□□□□□ -0.54
DDR1-232ENST00000418800 CCDC154A6NI56 674 aa11.65□□□□□ -0.54
DDR1-232ENST00000418800 BEST1O76090 585 aa11.65□□□□□ -0.54
DDR1-232ENST00000418800 THRBP10828 461 aa11.65□□□□□ -0.54
DDR1-232ENST00000418800 OXA1LQ15070 435 aa11.65□□□□□ -0.54
DDR1-232ENST00000418800 STXBP5Q5T5C0 1151 aa11.65□□□□□ -0.54
DDR1-232ENST00000418800 FAM117BQ6P1L5 589 aa11.65□□□□□ -0.54
DDR1-232ENST00000418800 KIAA0408Q6ZU52 694 aa11.65□□□□□ -0.54
DDR1-232ENST00000418800 RETREG3Q86VR2 466 aa11.65□□□□□ -0.54
DDR1-232ENST00000418800 STYXQ8WUJ0 223 aa11.65□□□□□ -0.54
DDR1-232ENST00000418800 ZNF486Q96H40 463 aaPredicted RBP11.65□□□□□ -0.54
DDR1-232ENST00000418800 ASB7Q9H672 318 aa11.65□□□□□ -0.54
DDR1-232ENST00000418800 SLAMF8Q9P0V8 285 aa11.65□□□□□ -0.54
DDR1-232ENST00000418800 TCAF1Q9Y4C2 921 aa11.65□□□□□ -0.54
DDR1-232ENST00000418800 MYO10Q9HD67 2058 aa11.65□□□□□ -0.54
DDR1-232ENST00000418800 UBR3Q6ZT12 1888 aa11.65□□□□□ -0.54
DDR1-232ENST00000418800 YJEFN3A6XGL0 299 aa11.65□□□□□ -0.54
DDR1-232ENST00000418800 LTA4HP09960 611 aaKnown RBP11.65□□□□□ -0.54
DDR1-232ENST00000418800 MBL2P11226 248 aaPredicted RBP11.65□□□□□ -0.54
DDR1-232ENST00000418800 DDX5P17844 614 aaKnown RBP11.65□□□□□ -0.54
DDR1-232ENST00000418800 FSHRP23945 695 aa11.65□□□□□ -0.54
DDR1-232ENST00000418800 SHMT2P34897 504 aa11.65□□□□□ -0.54
DDR1-232ENST00000418800 MBTD1Q05BQ5 628 aa11.65□□□□□ -0.54
DDR1-232ENST00000418800 NAB1Q13506 487 aa11.65□□□□□ -0.54
DDR1-232ENST00000418800 TAB1Q15750 504 aa11.65□□□□□ -0.54
DDR1-232ENST00000418800 SLC25A52Q3SY17 297 aa11.65□□□□□ -0.54
DDR1-232ENST00000418800 WSCD1Q658N2 575 aa11.65□□□□□ -0.54
DDR1-232ENST00000418800 SDE2Q6IQ49 451 aa11.65□□□□□ -0.54
DDR1-232ENST00000418800 DHRS4L2Q6PKH6 230 aa11.65□□□□□ -0.54
DDR1-232ENST00000418800 MMAAQ8IVH4 418 aaKnown RBP11.65□□□□□ -0.54
DDR1-232ENST00000418800 ALDH16A1Q8IZ83 802 aa11.65□□□□□ -0.54
DDR1-232ENST00000418800 CDYL2Q8N8U2 506 aa11.65□□□□□ -0.54
DDR1-232ENST00000418800 AFG1LQ8WV93 481 aa11.65□□□□□ -0.54
DDR1-232ENST00000418800 ATL1Q8WXF7 558 aa11.65□□□□□ -0.54
DDR1-232ENST00000418800 TNIP3Q96KP6 325 aa11.65□□□□□ -0.54
DDR1-232ENST00000418800 CDK5RAP1Q96SZ6 601 aaKnown RBP11.65□□□□□ -0.54
DDR1-232ENST00000418800 MLPHQ9BV36 600 aaPredicted RBP11.65□□□□□ -0.54
DDR1-232ENST00000418800 NIFKQ9BYG3 293 aaKnown RBP11.65□□□□□ -0.54
DDR1-232ENST00000418800 PDZD7Q9H5P4 517 aa11.65□□□□□ -0.54
DDR1-232ENST00000418800 MAGEE1Q9HCI5 957 aa11.65□□□□□ -0.54
DDR1-232ENST00000418800 ZMYM5Q9UJ78 669 aa11.65□□□□□ -0.54
DDR1-232ENST00000418800 FZD10Q9ULW2 581 aa11.65□□□□□ -0.54
DDR1-232ENST00000418800 SLX4Q8IY92 1834 aa11.65□□□□□ -0.55
DDR1-232ENST00000418800 HBP1O60381 514 aa11.64□□□□□ -0.55
DDR1-232ENST00000418800 RECQL4O94761 1208 aa11.64□□□□□ -0.55
DDR1-232ENST00000418800 GABRB3P28472 473 aa11.64□□□□□ -0.55
DDR1-232ENST00000418800 GSK3BP49841 420 aa11.64□□□□□ -0.55
DDR1-232ENST00000418800 HLCSP50747 726 aa11.64□□□□□ -0.55
DDR1-232ENST00000418800 TRAF3Q13114 568 aa11.64□□□□□ -0.55
DDR1-232ENST00000418800 PCID2Q5JVF3 399 aa11.64□□□□□ -0.55
DDR1-232ENST00000418800 STEAP4Q687X5 459 aa11.64□□□□□ -0.55
DDR1-232ENST00000418800 GLYATQ6IB77 296 aa11.64□□□□□ -0.55
DDR1-232ENST00000418800 NPWQ8N729 165 aa11.64□□□□□ -0.55
DDR1-232ENST00000418800 TRPV3Q8NET8 790 aa11.64□□□□□ -0.55
DDR1-232ENST00000418800 RPL3LQ92901 407 aaKnown RBP11.64□□□□□ -0.55
DDR1-232ENST00000418800 RTP4Q96DX8 246 aa11.64□□□□□ -0.55
DDR1-232ENST00000418800 B3GALT6Q96L58 329 aa11.64□□□□□ -0.55
DDR1-232ENST00000418800 TMEM246Q9BRR3 403 aa11.64□□□□□ -0.55
DDR1-232ENST00000418800 RHOBTB2Q9BYZ6 727 aa11.64□□□□□ -0.55
DDR1-232ENST00000418800 ELP3Q9H9T3 547 aa11.64□□□□□ -0.55
DDR1-232ENST00000418800 ZNF221Q9UK13 617 aa11.64□□□□□ -0.55
DDR1-232ENST00000418800 ANKRD6Q9Y2G4 727 aa11.64□□□□□ -0.55
DDR1-232ENST00000418800 SPEF1Q9Y4P9 236 aa11.64□□□□□ -0.55
DDR1-232ENST00000418800 KIF13BQ9NQT8 1826 aa11.64□□□□□ -0.55
DDR1-232ENST00000418800 MAGEB16A2A368 324 aa11.64□□□□□ -0.55
DDR1-232ENST00000418800 KLRG2A4D1S0 409 aaPredicted RBP11.64□□□□□ -0.55
DDR1-232ENST00000418800 UNCXA6NJT0 531 aa11.64□□□□□ -0.55
DDR1-232ENST00000418800 MTHFRP42898 656 aa11.64□□□□□ -0.55
DDR1-232ENST00000418800 MAGEA3P43357 314 aa11.64□□□□□ -0.55
DDR1-232ENST00000418800 TJAP1Q5JTD0 557 aa11.64□□□□□ -0.55
DDR1-232ENST00000418800 BTBD8Q5XKL5 378 aa11.64□□□□□ -0.55
DDR1-232ENST00000418800 PKN3Q6P5Z2 889 aa11.64□□□□□ -0.55
DDR1-232ENST00000418800 FAM126BQ8IXS8 530 aa11.64□□□□□ -0.55
DDR1-232ENST00000418800 CNIH3Q8TBE1 160 aa11.64□□□□□ -0.55
DDR1-232ENST00000418800 OSCP1Q8WVF1 389 aa11.64□□□□□ -0.55
DDR1-232ENST00000418800 EVPLQ92817 2033 aa11.64□□□□□ -0.55
DDR1-232ENST00000418800 KHSRPQ92945 711 aaKnown RBP eCLIP11.64□□□□□ -0.55
DDR1-232ENST00000418800 SLX1AQ9BQ83 275 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms