RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 SMOC2Q9H3U7 446 aa7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 TDRD3Q9H7E2 651 aaKnown RBP7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 AKTIPQ9H8T0 292 aa7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 CYP3A43Q9HB55 503 aa7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 KLHL8Q9P2G9 620 aaPredicted RBP7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 RCOR3Q9P2K3 495 aaPredicted RBP7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 INTS6Q9UL03 887 aaKnown RBP7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 V9GYQ6 96 aa7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 COL11A1P12107 1806 aaPredicted RBP7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 A0A087X1B8 175 aa7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 FAM95CA0A1B0GW59 222 aa7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 ZSCAN5BA6NJL1 495 aa7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 ERI2A8K979 691 aaKnown RBP7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 ZBBXA8MT70 800 aa7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 UBFD1O14562 309 aaKnown RBP7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 PRKACBP22694 351 aa7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 ISL1P61371 349 aa7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 KRR1Q13601 381 aaKnown RBP7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 TECRLQ5HYJ1 363 aa7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 STYK1Q6J9G0 422 aa7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 XRRA1Q6P2D8 792 aa7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 VSIG10LQ86VR7 867 aa7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 ZNF566Q969W8 418 aa7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 SLC52A3Q9NQ40 469 aa7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 FNDC1Q4ZHG4 1894 aaPredicted RBP7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 PABPN1LA6NDY0 278 aaKnown RBP7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 AGAP5A6NIR3 686 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 G3V3G9 751 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 KCNK1O00180 336 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 TEX28O15482 410 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 TULP3O75386 442 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 HRH2P25021 359 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 EEFSECP57772 596 aaKnown RBP7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 SNAP47Q5SQN1 464 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 DCAF8Q5TAQ9 597 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 ZNF544Q6NX49 715 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 UTS2BQ765I0 119 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 PROSER1Q86XN7 944 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 ZDHHC13Q8IUH4 622 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 C1orf127Q8N9H9 656 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 FAM83FQ8NEG4 500 aaPredicted RBP7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 DNAJB14Q8TBM8 379 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 TRIM63Q969Q1 353 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 LGALS12Q96DT0 336 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 DEPDC7Q96QD5 511 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 DHRS9Q9BPW9 319 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 TMEM246Q9BRR3 403 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 TRMOQ9BU70 441 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 FAM49AQ9H0Q0 323 aaPredicted RBP7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 MMP27Q9H306 513 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 GSTO2Q9H4Y5 243 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 ANKRD12Q6UB98 2062 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 BPTFQ12830 3046 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 PDZK1P1A8MUH7 402 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 C9JVG2 144 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 HUS1O60921 280 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 LRIG2O94898 1065 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 HTR1EP28566 365 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 HTR3AP46098 478 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 TUBA1BP68363 451 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 CCNA1P78396 465 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 ARHGEF6Q15052 776 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 ZFP69Q49AA0 526 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 COLEC12Q5KU26 742 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 BRMS1LQ5PSV4 323 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 SYT6Q5T7P8 510 aaPredicted RBP7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 FAM219BQ5XKK7 198 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 BLOC1S3Q6QNY0 202 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 TUBA1AQ71U36 451 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 GDPD3Q7L5L3 318 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 CNTN4Q8IWV2 1026 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 SLC22A15Q8IZD6 547 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 METTL4Q8N3J2 472 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 GRPEL2Q8TAA5 225 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 CEP295NLQ96MC4 621 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 CYP2S1Q96SQ9 504 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 SDR39U1Q9NRG7 319 aaPredicted RBP7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 IGSF5Q9NSI5 407 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 DDX28Q9NUL7 540 aaKnown RBP7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 CCDC154A6NI56 674 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 CENPXA8MT69 81 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 G3V2T6 193 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 SUPT20HL2P0C7V6 817 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 CYP2B6P20813 491 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 PTPN3P26045 913 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 TUFMP49411 452 aaKnown RBP7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 APLP1P51693 650 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 TKTL1P51854 596 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 EFNA5P52803 228 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 TAS2R39P59534 338 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 KCNAB2Q13303 367 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 NFYCQ13952 458 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 GOLGA7BQ2TAP0 167 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 SUPT20HL1Q3ZLR7 823 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 PLD3Q8IV08 490 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 GALNT12Q8IXK2 581 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 CELF2-AS1Q8N7Q2 184 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 GLIS2Q9BZE0 524 aaPredicted RBP7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 IRF2BPLQ9H1B7 796 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms