RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 GNA13Q14344 377 aa12□□□□□ -0.49
UBR4-205ENST00000417040 LCN1P1Q5VSP4 162 aa12□□□□□ -0.49
UBR4-205ENST00000417040 POMZP3Q6PJE2 187 aa12□□□□□ -0.49
UBR4-205ENST00000417040 PRR23CQ6ZRP0 262 aa12□□□□□ -0.49
UBR4-205ENST00000417040 SPATA19Q7Z5L4 167 aa12□□□□□ -0.49
UBR4-205ENST00000417040 UBR7Q8N806 425 aa12□□□□□ -0.49
UBR4-205ENST00000417040 KBTBD7Q8WVZ9 684 aa12□□□□□ -0.49
UBR4-205ENST00000417040 ZNF879B4DU55 563 aa12□□□□□ -0.49
UBR4-205ENST00000417040 TNFRSF11BO00300 401 aa12□□□□□ -0.49
UBR4-205ENST00000417040 CABYRO75952 493 aa12□□□□□ -0.49
UBR4-205ENST00000417040 MYCLP1P12525 358 aaPredicted RBP12□□□□□ -0.49
UBR4-205ENST00000417040 KLRC2P26717 231 aa12□□□□□ -0.49
UBR4-205ENST00000417040 AP2S1P53680 142 aaPredicted RBP12□□□□□ -0.49
UBR4-205ENST00000417040 SUZ12Q15022 739 aaKnown RBP12□□□□□ -0.49
UBR4-205ENST00000417040 ESAMQ96AP7 390 aa12□□□□□ -0.49
UBR4-205ENST00000417040 APOLD1Q96LR9 279 aa12□□□□□ -0.49
UBR4-205ENST00000417040 GPATCH1Q9BRR8 931 aaKnown RBP12□□□□□ -0.49
UBR4-205ENST00000417040 OSER1Q9NX31 292 aa12□□□□□ -0.49
UBR4-205ENST00000417040 TUBA8Q9NY65 449 aaPredicted RBP12□□□□□ -0.49
UBR4-205ENST00000417040 TESMINQ9Y4I5 508 aa12□□□□□ -0.49
UBR4-205ENST00000417040 UGT2B17O75795 530 aa12□□□□□ -0.49
UBR4-205ENST00000417040 PGRP06401 933 aa12□□□□□ -0.49
UBR4-205ENST00000417040 BMP7P18075 431 aa12□□□□□ -0.49
UBR4-205ENST00000417040 POLR2EP19388 210 aaKnown RBP12□□□□□ -0.49
UBR4-205ENST00000417040 APOBEC3HQ6NTF7 200 aaKnown RBP12□□□□□ -0.49
UBR4-205ENST00000417040 LRRC57Q8N9N7 239 aa12□□□□□ -0.49
UBR4-205ENST00000417040 C10orf82Q8WW14 230 aa12□□□□□ -0.49
UBR4-205ENST00000417040 ING5Q8WYH8 240 aa12□□□□□ -0.49
UBR4-205ENST00000417040 PPCDCQ96CD2 204 aa12□□□□□ -0.49
UBR4-205ENST00000417040 CCDC115Q96NT0 180 aa12□□□□□ -0.49
UBR4-205ENST00000417040 FRMPD1Q5SYB0 1578 aa12□□□□□ -0.49
UBR4-205ENST00000417040 COL3A1P02461 1466 aaPredicted RBP12□□□□□ -0.49
UBR4-205ENST00000417040 CYP3A7-CYP3A51PA0A087WV96 503 aa11.99□□□□□ -0.49
UBR4-205ENST00000417040 PDHXO00330 501 aa11.99□□□□□ -0.49
UBR4-205ENST00000417040 NDUFS2O75306 463 aa11.99□□□□□ -0.49
UBR4-205ENST00000417040 PSKH1P11801 424 aa11.99□□□□□ -0.49
UBR4-205ENST00000417040 CYP3A7P24462 503 aa11.99□□□□□ -0.49
UBR4-205ENST00000417040 WNT3AP56704 352 aa11.99□□□□□ -0.49
UBR4-205ENST00000417040 SNAPC1Q16533 368 aa11.99□□□□□ -0.49
UBR4-205ENST00000417040 UBE2R2Q712K3 238 aaPredicted RBP11.99□□□□□ -0.49
UBR4-205ENST00000417040 OR10A6Q8NH74 314 aa11.99□□□□□ -0.49
UBR4-205ENST00000417040 SPATA22Q8NHS9 363 aa11.99□□□□□ -0.49
UBR4-205ENST00000417040 MFSD3Q96ES6 412 aa11.99□□□□□ -0.49
UBR4-205ENST00000417040 NODALQ96S42 347 aa11.99□□□□□ -0.49
UBR4-205ENST00000417040 SAMD4AQ9UPU9 718 aaKnown RBP11.99□□□□□ -0.49
UBR4-205ENST00000417040 PDLIM1O00151 329 aa11.99□□□□□ -0.49
UBR4-205ENST00000417040 AP3D1O14617 1153 aa11.99□□□□□ -0.49
UBR4-205ENST00000417040 BMP10O95393 424 aa11.99□□□□□ -0.49
UBR4-205ENST00000417040 CCNE2O96020 404 aa11.99□□□□□ -0.49
UBR4-205ENST00000417040 TRBC1P01850 177 aa11.99□□□□□ -0.49
UBR4-205ENST00000417040 PTGS2P35354 604 aa11.99□□□□□ -0.49
UBR4-205ENST00000417040 MARSP56192 900 aaKnown RBP11.99□□□□□ -0.49
UBR4-205ENST00000417040 MRPS5P82675 430 aaKnown RBP11.99□□□□□ -0.49
UBR4-205ENST00000417040 FBXL19Q6PCT2 694 aa11.99□□□□□ -0.49
UBR4-205ENST00000417040 MON1BQ7L1V2 547 aa11.99□□□□□ -0.49
UBR4-205ENST00000417040 FAM35AQ86V20 835 aa11.99□□□□□ -0.49
UBR4-205ENST00000417040 ANKRD52Q8NB46 1076 aa11.99□□□□□ -0.49
UBR4-205ENST00000417040 HELQQ8TDG4 1101 aa11.99□□□□□ -0.49
UBR4-205ENST00000417040 C18orf25Q96B23 403 aaPredicted RBP11.99□□□□□ -0.49
UBR4-205ENST00000417040 FERD3LQ96RJ6 166 aa11.99□□□□□ -0.49
UBR4-205ENST00000417040 EBF2Q9HAK2 575 aa11.99□□□□□ -0.49
UBR4-205ENST00000417040 SCGNO76038 276 aa11.99□□□□□ -0.49
UBR4-205ENST00000417040 PTPRAP18433 802 aa11.99□□□□□ -0.49
UBR4-205ENST00000417040 SDC2P34741 201 aa11.99□□□□□ -0.49
UBR4-205ENST00000417040 CDKN2BP42772 138 aa11.99□□□□□ -0.49
UBR4-205ENST00000417040 MANFP55145 182 aaKnown RBP11.99□□□□□ -0.49
UBR4-205ENST00000417040 MTPNP58546 118 aa11.99□□□□□ -0.49
UBR4-205ENST00000417040 ITIH5Q86UX2 942 aa11.99□□□□□ -0.49
UBR4-205ENST00000417040 LIX1Q8N485 282 aa11.99□□□□□ -0.49
UBR4-205ENST00000417040 PTCD2Q8WV60 388 aaKnown RBP11.99□□□□□ -0.49
UBR4-205ENST00000417040 GAL3ST1Q99999 423 aa11.99□□□□□ -0.49
UBR4-205ENST00000417040 TBC1D17Q9HA65 648 aa11.99□□□□□ -0.49
UBR4-205ENST00000417040 GOLGA2P5Q9HBQ8 144 aa11.99□□□□□ -0.49
UBR4-205ENST00000417040 AAASQ9NRG9 546 aa11.99□□□□□ -0.49
UBR4-205ENST00000417040 GRHL1Q9NZI5 618 aa11.99□□□□□ -0.49
UBR4-205ENST00000417040 ABCA9Q8IUA7 1624 aa11.99□□□□□ -0.49
UBR4-205ENST00000417040 ZNF432O94892 652 aa11.99□□□□□ -0.49
UBR4-205ENST00000417040 DHFRP00374 187 aa11.99□□□□□ -0.49
UBR4-205ENST00000417040 NRLP54845 237 aa11.99□□□□□ -0.49
UBR4-205ENST00000417040 PCDH1Q08174 1060 aa11.99□□□□□ -0.49
UBR4-205ENST00000417040 BNIP3Q12983 259 aa11.99□□□□□ -0.49
UBR4-205ENST00000417040 IL23RQ5VWK5 629 aa11.99□□□□□ -0.49
UBR4-205ENST00000417040 CSPG4P5Q96PW8 444 aa11.99□□□□□ -0.49
UBR4-205ENST00000417040 ADAM2Q99965 735 aa11.99□□□□□ -0.49
UBR4-205ENST00000417040 SNTG1Q9NSN8 517 aa11.99□□□□□ -0.49
UBR4-205ENST00000417040 PPM1HQ9ULR3 514 aa11.99□□□□□ -0.49
UBR4-205ENST00000417040 AGLP35573 1532 aa11.99□□□□□ -0.49
UBR4-205ENST00000417040 PIP5K1BO14986 540 aa11.99□□□□□ -0.49
UBR4-205ENST00000417040 CST3P01034 146 aaPredicted RBP11.99□□□□□ -0.49
UBR4-205ENST00000417040 JAM2P57087 298 aa11.99□□□□□ -0.49
UBR4-205ENST00000417040 GALNTL5Q7Z4T8 443 aa11.99□□□□□ -0.49
UBR4-205ENST00000417040 C12orf4Q9NQ89 552 aa11.99□□□□□ -0.49
UBR4-205ENST00000417040 EIF3KQ9UBQ5 218 aaKnown RBP11.99□□□□□ -0.49
UBR4-205ENST00000417040 VWDEQ8N2E2 1590 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 TNS2Q63HR2 1409 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 ELOVL7A1L3X0 281 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 CPSF4LA6NMK7 179 aaKnown RBP11.98□□□□□ -0.49
UBR4-205ENST00000417040 PSMD9O00233 223 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 CCRL2O00421 344 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 DHX15O43143 795 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms