RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 GPR1P46091 355 aa9.48□□□□□ -0.89
RFFL-203ENST00000413582 KLK7P49862 253 aa9.48□□□□□ -0.89
RFFL-203ENST00000413582 ZNF143P52747 638 aaPredicted RBP9.48□□□□□ -0.89
RFFL-203ENST00000413582 EPHA4P54764 986 aa9.48□□□□□ -0.89
RFFL-203ENST00000413582 UBXN1Q04323 297 aa9.48□□□□□ -0.89
RFFL-203ENST00000413582 IL10RBQ08334 325 aa9.48□□□□□ -0.89
RFFL-203ENST00000413582 TRAF2Q12933 501 aa9.48□□□□□ -0.89
RFFL-203ENST00000413582 NFATC2Q13469 925 aa9.48□□□□□ -0.89
RFFL-203ENST00000413582 PTPRRQ15256 657 aa9.48□□□□□ -0.89
RFFL-203ENST00000413582 FIGNQ5HY92 759 aa9.48□□□□□ -0.89
RFFL-203ENST00000413582 TMCO4Q5TGY1 634 aa9.48□□□□□ -0.89
RFFL-203ENST00000413582 ADAMTSL4Q6UY14 1074 aa9.48□□□□□ -0.89
RFFL-203ENST00000413582 TRIM72Q6ZMU5 477 aa9.48□□□□□ -0.89
RFFL-203ENST00000413582 RFLNAQ6ZTI6 216 aa9.48□□□□□ -0.89
RFFL-203ENST00000413582 MARK2Q7KZI7 788 aaKnown RBP9.48□□□□□ -0.89
RFFL-203ENST00000413582 TECPR1Q7Z6L1 1165 aa9.48□□□□□ -0.89
RFFL-203ENST00000413582 TSPAN33Q86UF1 283 aa9.48□□□□□ -0.89
RFFL-203ENST00000413582 GALNT13Q8IUC8 556 aa9.48□□□□□ -0.89
RFFL-203ENST00000413582 VSTM4Q8IW00 320 aa9.48□□□□□ -0.89
RFFL-203ENST00000413582 APLFQ8IW19 511 aaPredicted RBP9.48□□□□□ -0.89
RFFL-203ENST00000413582 MCCC1Q96RQ3 725 aaPredicted RBP9.48□□□□□ -0.89
RFFL-203ENST00000413582 PCDHB18PQ96TA0 734 aa9.48□□□□□ -0.89
RFFL-203ENST00000413582 TRIM55Q9BYV6 548 aa9.48□□□□□ -0.89
RFFL-203ENST00000413582 GANQ9H2C0 597 aa9.48□□□□□ -0.89
RFFL-203ENST00000413582 IGSF5Q9NSI5 407 aa9.48□□□□□ -0.89
RFFL-203ENST00000413582 GPATCH2LQ9NWQ4 482 aa9.48□□□□□ -0.89
RFFL-203ENST00000413582 DONSONQ9NYP3 566 aa9.48□□□□□ -0.89
RFFL-203ENST00000413582 ADAM22Q9P0K1 906 aa9.48□□□□□ -0.89
RFFL-203ENST00000413582 RCOR3Q9P2K3 495 aaPredicted RBP9.48□□□□□ -0.89
RFFL-203ENST00000413582 KLHL3Q9UH77 587 aa9.48□□□□□ -0.89
RFFL-203ENST00000413582 SIK3Q9Y2K2 1263 aa9.48□□□□□ -0.89
RFFL-203ENST00000413582 MAP4K5Q9Y4K4 846 aa9.48□□□□□ -0.89
RFFL-203ENST00000413582 PCDHGC4Q9Y5F7 938 aa9.48□□□□□ -0.89
RFFL-203ENST00000413582 PCYT1BQ9Y5K3 369 aaPredicted RBP9.48□□□□□ -0.89
RFFL-203ENST00000413582 POLQO75417 2590 aa9.48□□□□□ -0.89
RFFL-203ENST00000413582 POLEQ07864 2286 aa9.47□□□□□ -0.89
RFFL-203ENST00000413582 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.47□□□□□ -0.89
RFFL-203ENST00000413582 A0A1W2PQ67 120 aa9.47□□□□□ -0.89
RFFL-203ENST00000413582 CDC14CA4D256 554 aa9.47□□□□□ -0.89
RFFL-203ENST00000413582 A6NCN8 305 aa9.47□□□□□ -0.89
RFFL-203ENST00000413582 SIGLEC16A6NMB1 481 aa9.47□□□□□ -0.89
RFFL-203ENST00000413582 EPHB6O15197 1021 aa9.47□□□□□ -0.89
RFFL-203ENST00000413582 DDAH2O95865 285 aa9.47□□□□□ -0.89
RFFL-203ENST00000413582 CYP2A6P11509 494 aaPredicted RBP9.47□□□□□ -0.89
RFFL-203ENST00000413582 MAPK9P45984 424 aa9.47□□□□□ -0.89
RFFL-203ENST00000413582 NSFP46459 744 aaKnown RBP9.47□□□□□ -0.89
RFFL-203ENST00000413582 RENBPP51606 427 aa9.47□□□□□ -0.89
RFFL-203ENST00000413582 GFERP55789 205 aa9.47□□□□□ -0.89
RFFL-203ENST00000413582 GSDMDP57764 484 aa9.47□□□□□ -0.89
RFFL-203ENST00000413582 CA9Q16790 459 aa9.47□□□□□ -0.89
RFFL-203ENST00000413582 NADK2Q4G0N4 442 aa9.47□□□□□ -0.89
RFFL-203ENST00000413582 DNAJC24Q6P3W2 148 aa9.47□□□□□ -0.89
RFFL-203ENST00000413582 C6orf15Q6UXA7 325 aaPredicted RBP9.47□□□□□ -0.89
RFFL-203ENST00000413582 RFX8Q6ZV50 586 aa9.47□□□□□ -0.89
RFFL-203ENST00000413582 MON1BQ7L1V2 547 aa9.47□□□□□ -0.89
RFFL-203ENST00000413582 MAMDC2Q7Z304 686 aaPredicted RBP9.47□□□□□ -0.89
RFFL-203ENST00000413582 PHF13Q86YI8 300 aaPredicted RBP9.47□□□□□ -0.89
RFFL-203ENST00000413582 TICAM1Q8IUC6 712 aa9.47□□□□□ -0.89
RFFL-203ENST00000413582 GALNT6Q8NCL4 622 aa9.47□□□□□ -0.89
RFFL-203ENST00000413582 PDCD6IPQ8WUM4 868 aaKnown RBP9.47□□□□□ -0.89
RFFL-203ENST00000413582 MCEEQ96PE7 176 aa9.47□□□□□ -0.89
RFFL-203ENST00000413582 CNPY3Q9BT09 278 aa9.47□□□□□ -0.89
RFFL-203ENST00000413582 STN1Q9H668 368 aaKnown RBP9.47□□□□□ -0.89
RFFL-203ENST00000413582 TBC1D29Q9UFV1 150 aa9.47□□□□□ -0.89
RFFL-203ENST00000413582 CD84Q9UIB8 345 aa9.47□□□□□ -0.89
RFFL-203ENST00000413582 PCDHGA6Q9Y5G7 932 aa9.47□□□□□ -0.89
RFFL-203ENST00000413582 CSMD1Q96PZ7 3565 aa9.47□□□□□ -0.89
RFFL-203ENST00000413582 DIDO1Q9BTC0 2240 aaKnown RBP9.47□□□□□ -0.89
RFFL-203ENST00000413582 F8P00451 2351 aa9.46□□□□□ -0.89
RFFL-203ENST00000413582 A0A0U1RQS6 177 aa9.46□□□□□ -0.9
RFFL-203ENST00000413582 LILRA5A6NI73 299 aa9.46□□□□□ -0.9
RFFL-203ENST00000413582 DFFAO00273 331 aa9.46□□□□□ -0.9
RFFL-203ENST00000413582 EEF2KO00418 725 aaKnown RBP9.46□□□□□ -0.9
RFFL-203ENST00000413582 DNAJC6O75061 913 aa9.46□□□□□ -0.9
RFFL-203ENST00000413582 KATNA1O75449 491 aa9.46□□□□□ -0.9
RFFL-203ENST00000413582 CREG1O75629 220 aa9.46□□□□□ -0.9
RFFL-203ENST00000413582 KIAA0754O94854 1291 aa9.46□□□□□ -0.9
RFFL-203ENST00000413582 PGLSO95336 258 aa9.46□□□□□ -0.9
RFFL-203ENST00000413582 CLDN1O95832 211 aa9.46□□□□□ -0.9
RFFL-203ENST00000413582 RECKO95980 971 aa9.46□□□□□ -0.9
RFFL-203ENST00000413582 C9P02748 559 aa9.46□□□□□ -0.9
RFFL-203ENST00000413582 CALB1P05937 261 aa9.46□□□□□ -0.9
RFFL-203ENST00000413582 TPM1P09493 284 aa9.46□□□□□ -0.9
RFFL-203ENST00000413582 ERCC2P18074 760 aa9.46□□□□□ -0.9
RFFL-203ENST00000413582 NFKBIAP25963 317 aa9.46□□□□□ -0.9
RFFL-203ENST00000413582 COL8A1P27658 744 aa9.46□□□□□ -0.9
RFFL-203ENST00000413582 SOX5P35711 763 aa9.46□□□□□ -0.9
RFFL-203ENST00000413582 JAM2P57087 298 aa9.46□□□□□ -0.9
RFFL-203ENST00000413582 RPL7AP62424 266 aaKnown RBP9.46□□□□□ -0.9
RFFL-203ENST00000413582 SH3BP2P78314 561 aa9.46□□□□□ -0.9
RFFL-203ENST00000413582 OGDHQ02218 1023 aa9.46□□□□□ -0.9
RFFL-203ENST00000413582 FOXM1Q08050 763 aa9.46□□□□□ -0.9
RFFL-203ENST00000413582 SLC10A7Q0GE19 358 aa9.46□□□□□ -0.9
RFFL-203ENST00000413582 TBX2Q13207 712 aaPredicted RBP9.46□□□□□ -0.9
RFFL-203ENST00000413582 SEMA5AQ13591 1074 aa9.46□□□□□ -0.9
RFFL-203ENST00000413582 DNASE1L3Q13609 305 aa9.46□□□□□ -0.9
RFFL-203ENST00000413582 LBRQ14739 615 aaKnown RBP9.46□□□□□ -0.9
RFFL-203ENST00000413582 SYCP1Q15431 976 aa9.46□□□□□ -0.9
RFFL-203ENST00000413582 CLEC16AQ2KHT3 1053 aa9.46□□□□□ -0.9
RFFL-203ENST00000413582 PRR30Q53SZ7 412 aaPredicted RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms