RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 LNX1Q8TBB1 728 aaPredicted RBP8.48□□□□□ -1.05
PBRM1-209ENST00000412587 VAT1Q99536 393 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 UGT2B28Q9BY64 529 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 SLC22A4Q9H015 551 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 IGFLR1Q9H665 355 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 IFT22Q9H7X7 185 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 SYTL2Q9HCH5 934 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 OR12D3Q9UGF7 316 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 NR5A2O00482 541 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 FSCN2O14926 492 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 B4GALT4O60513 344 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 PTTG1O95997 202 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 CSH1P0DML2 217 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 CSH2P0DML3 217 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 TPH1P17752 444 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 AOC1P19801 751 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 SLC15A1P46059 708 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 TRIP4Q15650 581 aaPredicted RBP8.48□□□□□ -1.05
PBRM1-209ENST00000412587 KCNA10Q16322 511 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 HIST2H2ACQ16777 129 aaPredicted RBP8.48□□□□□ -1.05
PBRM1-209ENST00000412587 BTBD16Q32M84 506 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 PLA2G4EQ3MJ16 856 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 PYDC2Q56P42 97 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 HIST2H2AA3Q6FI13 130 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 PYHIN1Q6K0P9 492 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 ZNF598Q86UK7 904 aaKnown RBP8.48□□□□□ -1.05
PBRM1-209ENST00000412587 SLC51AQ86UW1 340 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 NATD1Q8N6N6 113 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 ANGPTL6Q8NI99 470 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 BSNDQ8WZ55 320 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 MYLPFQ96A32 169 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 CCDC126Q96EE4 140 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 TTYH2Q9BSA4 534 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 TSEN34Q9BSV6 310 aaKnown RBP8.48□□□□□ -1.05
PBRM1-209ENST00000412587 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.48□□□□□ -1.05
PBRM1-209ENST00000412587 ADAM7Q9H2U9 754 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 COQ3Q9NZJ6 369 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 ARHGAP28Q9P2N2 729 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 RNF112Q9ULX5 631 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 KCPQ6ZWJ8 1503 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 CA12O43570 354 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 BPGMP07738 259 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 T-ENOLP0DO92 83 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 PPM1AP35813 382 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 BRCC3P46736 316 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 NOMO3P69849 1222 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 RFX4Q33E94 735 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 FUT11Q495W5 492 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 LRRC38Q5VT99 294 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 DLK2Q6UY11 383 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 RRM2BQ7LG56 351 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 COLGALT2Q8IYK4 626 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 DEPDC4Q8N2C3 294 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 SLAIN1Q8ND83 568 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 OR2T34Q8NGX1 318 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 OR2T3Q8NH03 318 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 NKX2-3Q8TAU0 364 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 ALG3Q92685 438 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 LENG9Q96B70 501 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 CENPNQ96H22 339 aaPredicted RBP8.48□□□□□ -1.05
PBRM1-209ENST00000412587 CCDC120Q96HB5 630 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 ZC3H10Q96K80 434 aaKnown RBP8.48□□□□□ -1.05
PBRM1-209ENST00000412587 PWWP2AQ96N64 755 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 GON7Q9BXV9 100 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 FGFBP2Q9BYJ0 223 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 PRRG3Q9BZD7 231 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 IFT80Q9P2H3 777 aaPredicted RBP8.48□□□□□ -1.05
PBRM1-209ENST00000412587 RUVBL2Q9Y230 463 aaKnown RBP8.48□□□□□ -1.05
PBRM1-209ENST00000412587 PDE10AQ9Y233 779 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 DERAQ9Y315 318 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 PCDHA2Q9Y5H9 948 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 MAFBQ9Y5Q3 323 aaPredicted RBP8.48□□□□□ -1.05
PBRM1-209ENST00000412587 MRPL42Q9Y6G3 142 aaKnown RBP8.48□□□□□ -1.05
PBRM1-209ENST00000412587 SEPT4O43236 478 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 SERPINA1P01009 418 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 CYP1A2P05177 515 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 TSPAN19P0C672 248 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 SMPD1P17405 629 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 HDCP19113 662 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 UQCRC1P31930 480 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 GLRBP48167 497 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 RPL14P50914 215 aaKnown RBP8.47□□□□□ -1.05
PBRM1-209ENST00000412587 ACLYP53396 1101 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 MAB21L1Q13394 359 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 INSCQ1MX18 579 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 CCDC58Q4VC31 144 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 PKN3Q6P5Z2 889 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 PHF13Q86YI8 300 aaPredicted RBP8.47□□□□□ -1.05
PBRM1-209ENST00000412587 OFCC1Q8IZS5 231 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 CADM2Q8N3J6 435 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 TOP6BLQ8N6T0 577 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 LSMEM1Q8N8F7 131 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 CLHC1Q8NHS4 586 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 UPF1Q92900 1129 aaKnown RBP eCLIP8.47□□□□□ -1.05
PBRM1-209ENST00000412587 SNX18Q96RF0 628 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 HTATIP2Q9BUP3 242 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 C1QTNF1Q9BXJ1 281 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 PRKD2Q9BZL6 878 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 ROGDIQ9GZN7 287 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 POLE4Q9NR33 117 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms