RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 BCAS4Q8TDM0 211 aa4.55□□□□□ -1.68
BRCA1-204ENST00000412061 ST7LQ8TDW4 575 aa4.55□□□□□ -1.68
BRCA1-204ENST00000412061 PRCCQ92733 491 aaPredicted RBP4.55□□□□□ -1.68
BRCA1-204ENST00000412061 KAT2BQ92831 832 aa4.55□□□□□ -1.68
BRCA1-204ENST00000412061 ADAD1Q96M93 576 aaKnown RBP4.55□□□□□ -1.68
BRCA1-204ENST00000412061 CAMK1GQ96NX5 476 aa4.55□□□□□ -1.68
BRCA1-204ENST00000412061 FCRL5Q96RD9 977 aa4.55□□□□□ -1.68
BRCA1-204ENST00000412061 BBS4Q96RK4 519 aa4.55□□□□□ -1.68
BRCA1-204ENST00000412061 ZNF347Q96SE7 839 aa4.55□□□□□ -1.68
BRCA1-204ENST00000412061 CACNG6Q9BXT2 260 aa4.55□□□□□ -1.68
BRCA1-204ENST00000412061 HSD3B7Q9H2F3 369 aa4.55□□□□□ -1.68
BRCA1-204ENST00000412061 PLEKHA4Q9H4M7 779 aa4.55□□□□□ -1.68
BRCA1-204ENST00000412061 ZBTB40Q9NUA8 1239 aa4.55□□□□□ -1.68
BRCA1-204ENST00000412061 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.55□□□□□ -1.68
BRCA1-204ENST00000412061 LEF1Q9UJU2 399 aaPredicted RBP4.55□□□□□ -1.68
BRCA1-204ENST00000412061 DTX4Q9Y2E6 619 aa4.55□□□□□ -1.68
BRCA1-204ENST00000412061 RPH3AQ9Y2J0 694 aaPredicted RBP4.55□□□□□ -1.68
BRCA1-204ENST00000412061 FAM96BQ9Y3D0 163 aa4.55□□□□□ -1.68
BRCA1-204ENST00000412061 ATP8B3O60423 1300 aa4.55□□□□□ -1.68
BRCA1-204ENST00000412061 COL11A2P13942 1736 aaPredicted RBP4.54□□□□□ -1.68
BRCA1-204ENST00000412061 LNP1A1A4G5 178 aa4.54□□□□□ -1.68
BRCA1-204ENST00000412061 OOEPA6NGQ2 149 aa4.54□□□□□ -1.68
BRCA1-204ENST00000412061 KDM4EB2RXH2 506 aaPredicted RBP4.54□□□□□ -1.68
BRCA1-204ENST00000412061 NPIPB11E5RHQ5 1161 aa4.54□□□□□ -1.68
BRCA1-204ENST00000412061 H3BQ06 376 aaPredicted RBP4.54□□□□□ -1.68
BRCA1-204ENST00000412061 CYR61O00622 381 aa4.54□□□□□ -1.68
BRCA1-204ENST00000412061 IFIT3O14879 490 aaKnown RBP4.54□□□□□ -1.68
BRCA1-204ENST00000412061 PROP1O75360 226 aa4.54□□□□□ -1.68
BRCA1-204ENST00000412061 IFNB1P01574 187 aa4.54□□□□□ -1.68
BRCA1-204ENST00000412061 IL1AP01583 271 aa4.54□□□□□ -1.68
BRCA1-204ENST00000412061 HLA-DQA2P01906 255 aa4.54□□□□□ -1.68
BRCA1-204ENST00000412061 KLKB1P03952 638 aa4.54□□□□□ -1.68
BRCA1-204ENST00000412061 FAM58BPP0C7Q3 252 aa4.54□□□□□ -1.68
BRCA1-204ENST00000412061 NHLRC4P0CG21 123 aaPredicted RBP4.54□□□□□ -1.68
BRCA1-204ENST00000412061 FCGR2AP12318 317 aa4.54□□□□□ -1.68
BRCA1-204ENST00000412061 KRT13P13646 458 aa4.54□□□□□ -1.68
BRCA1-204ENST00000412061 ZNF182P17025 639 aaPredicted RBP4.54□□□□□ -1.68
BRCA1-204ENST00000412061 ANXA7P20073 488 aaKnown RBP4.54□□□□□ -1.68
BRCA1-204ENST00000412061 ITGAXP20702 1163 aa4.54□□□□□ -1.68
BRCA1-204ENST00000412061 PEX19P40855 299 aa4.54□□□□□ -1.68
BRCA1-204ENST00000412061 PRPHP41219 470 aa4.54□□□□□ -1.68
BRCA1-204ENST00000412061 KCNJ1P48048 391 aa4.54□□□□□ -1.68
BRCA1-204ENST00000412061 SOX2P48431 317 aa4.54□□□□□ -1.68
BRCA1-204ENST00000412061 CASP9P55211 416 aa4.54□□□□□ -1.68
BRCA1-204ENST00000412061 KIAA1024LP59773 190 aa4.54□□□□□ -1.68
BRCA1-204ENST00000412061 TUBA4AP68366 448 aa4.54□□□□□ -1.68
BRCA1-204ENST00000412061 ECT2LQ008S8 904 aa4.54□□□□□ -1.68
BRCA1-204ENST00000412061 TFAP4Q01664 338 aa4.54□□□□□ -1.68
BRCA1-204ENST00000412061 PPATQ06203 517 aa4.54□□□□□ -1.68
BRCA1-204ENST00000412061 MTA1Q13330 715 aa4.54□□□□□ -1.68
BRCA1-204ENST00000412061 PGM5Q15124 567 aa4.54□□□□□ -1.68
BRCA1-204ENST00000412061 RPE65Q16518 533 aa4.54□□□□□ -1.68
BRCA1-204ENST00000412061 TAZQ16635 292 aa4.54□□□□□ -1.68
BRCA1-204ENST00000412061 CBWD6Q4V339 395 aa4.54□□□□□ -1.68
BRCA1-204ENST00000412061 HSP90AA5PQ58FG0 334 aa4.54□□□□□ -1.68
BRCA1-204ENST00000412061 CBWD3Q5JTY5 395 aa4.54□□□□□ -1.68
BRCA1-204ENST00000412061 KRT39Q6A163 491 aa4.54□□□□□ -1.68
BRCA1-204ENST00000412061 DPY19L2P1Q6NXN4 242 aa4.54□□□□□ -1.68
BRCA1-204ENST00000412061 PCSK4Q6UW60 755 aa4.54□□□□□ -1.68
BRCA1-204ENST00000412061 RBM44Q6ZP01 1051 aaKnown RBP4.54□□□□□ -1.68
BRCA1-204ENST00000412061 SEPT14Q6ZU15 432 aa4.54□□□□□ -1.68
BRCA1-204ENST00000412061 CENPVQ7Z7K6 275 aaPredicted RBP4.54□□□□□ -1.68
BRCA1-204ENST00000412061 ADCK1Q86TW2 530 aa4.54□□□□□ -1.68
BRCA1-204ENST00000412061 CEP57Q86XR8 500 aa4.54□□□□□ -1.68
BRCA1-204ENST00000412061 RBM15BQ8NDT2 890 aaKnown RBP4.54□□□□□ -1.68
BRCA1-204ENST00000412061 PSMA8Q8TAA3 256 aa4.54□□□□□ -1.68
BRCA1-204ENST00000412061 GRAPLQ8TC17 118 aaPredicted RBP4.54□□□□□ -1.68
BRCA1-204ENST00000412061 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.54□□□□□ -1.68
BRCA1-204ENST00000412061 PIGKQ92643 395 aa4.54□□□□□ -1.68
BRCA1-204ENST00000412061 HES6Q96HZ4 224 aa4.54□□□□□ -1.68
BRCA1-204ENST00000412061 CEP295NLQ96MC4 621 aa4.54□□□□□ -1.68
BRCA1-204ENST00000412061 FAM111AQ96PZ2 611 aa4.54□□□□□ -1.68
BRCA1-204ENST00000412061 GAL3ST4Q96RP7 486 aa4.54□□□□□ -1.68
BRCA1-204ENST00000412061 RUFY1Q96T51 708 aa4.54□□□□□ -1.68
BRCA1-204ENST00000412061 TRIM7Q9C029 511 aa4.54□□□□□ -1.68
BRCA1-204ENST00000412061 MMP27Q9H306 513 aa4.54□□□□□ -1.68
BRCA1-204ENST00000412061 TMEM206Q9H813 350 aa4.54□□□□□ -1.68
BRCA1-204ENST00000412061 CNOT10Q9H9A5 744 aaKnown RBP4.54□□□□□ -1.68
BRCA1-204ENST00000412061 TXNRD2Q9NNW7 524 aa4.54□□□□□ -1.68
BRCA1-204ENST00000412061 IARS2Q9NSE4 1012 aaKnown RBP4.54□□□□□ -1.68
BRCA1-204ENST00000412061 CYP39A1Q9NYL5 469 aa4.54□□□□□ -1.68
BRCA1-204ENST00000412061 DDX25Q9UHL0 483 aaKnown RBP4.54□□□□□ -1.68
BRCA1-204ENST00000412061 FBXL5Q9UKA1 691 aa4.54□□□□□ -1.68
BRCA1-204ENST00000412061 AURKCQ9UQB9 309 aa4.54□□□□□ -1.68
BRCA1-204ENST00000412061 TNFSF13BQ9Y275 285 aa4.54□□□□□ -1.68
BRCA1-204ENST00000412061 CLDN16Q9Y5I7 305 aa4.54□□□□□ -1.68
BRCA1-204ENST00000412061 DMRT1Q9Y5R6 373 aa4.54□□□□□ -1.68
BRCA1-204ENST00000412061 TCRBV7S3A2A0A539 114 aa4.53□□□□□ -1.68
BRCA1-204ENST00000412061 TMEM247A6NEH6 219 aa4.53□□□□□ -1.68
BRCA1-204ENST00000412061 CCDC188H7C350 402 aa4.53□□□□□ -1.68
BRCA1-204ENST00000412061 CLIC2O15247 247 aa4.53□□□□□ -1.68
BRCA1-204ENST00000412061 INPPL1O15357 1258 aa4.53□□□□□ -1.68
BRCA1-204ENST00000412061 AKAP8O43823 692 aaKnown RBP4.53□□□□□ -1.68
BRCA1-204ENST00000412061 ZWINTO95229 277 aa4.53□□□□□ -1.68
BRCA1-204ENST00000412061 HOXB5P09067 269 aa4.53□□□□□ -1.68
BRCA1-204ENST00000412061 OR52Z1P0C646 297 aa4.53□□□□□ -1.68
BRCA1-204ENST00000412061 UROSP10746 265 aa4.53□□□□□ -1.68
BRCA1-204ENST00000412061 GHRP10912 638 aa4.53□□□□□ -1.68
BRCA1-204ENST00000412061 ST6GAL1P15907 406 aa4.53□□□□□ -1.68
BRCA1-204ENST00000412061 DNASE1P24855 282 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms