RNA–Protein interactions for RNA: ENST00000409985.5

PMS1-205, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 1,882 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-205ENST00000409985 NAIF1Q69YI7 327 aaPredicted RBP23.66■■□□□ 1.38
PMS1-205ENST00000409985 CHST9Q7L1S5 443 aa23.66■■□□□ 1.38
PMS1-205ENST00000409985 SPATA19Q7Z5L4 167 aa23.66■■□□□ 1.38
PMS1-205ENST00000409985 ZNF597Q96LX8 424 aa23.66■■□□□ 1.38
PMS1-205ENST00000409985 C3orf30Q96M34 536 aa23.66■■□□□ 1.38
PMS1-205ENST00000409985 SEPT5Q99719 369 aaPredicted RBP23.66■■□□□ 1.38
PMS1-205ENST00000409985 CCT7Q99832 543 aa23.66■■□□□ 1.38
PMS1-205ENST00000409985 SH3GL3Q99963 347 aa23.66■■□□□ 1.38
PMS1-205ENST00000409985 CINPQ9BW66 212 aaPredicted RBP23.66■■□□□ 1.38
PMS1-205ENST00000409985 MRPS26Q9BYN8 205 aaKnown RBP23.66■■□□□ 1.38
PMS1-205ENST00000409985 SLC2A11Q9BYW1 496 aa23.66■■□□□ 1.38
PMS1-205ENST00000409985 CCDC68Q9H2F9 335 aa23.66■■□□□ 1.38
PMS1-205ENST00000409985 CCSER2Q9H7U1 834 aa23.66■■□□□ 1.38
PMS1-205ENST00000409985 MID1IP1Q9NPA3 183 aa23.66■■□□□ 1.38
PMS1-205ENST00000409985 SDR39U1Q9NRG7 319 aaPredicted RBP23.66■■□□□ 1.38
PMS1-205ENST00000409985 ARMC1Q9NVT9 282 aa23.66■■□□□ 1.38
PMS1-205ENST00000409985 MARCH5Q9NX47 278 aa23.66■■□□□ 1.38
PMS1-205ENST00000409985 SLC27A5Q9Y2P5 690 aa23.66■■□□□ 1.38
PMS1-205ENST00000409985 COMMD10Q9Y6G5 202 aa23.66■■□□□ 1.38
PMS1-205ENST00000409985 OAS3Q9Y6K5 1087 aaKnown RBP23.66■■□□□ 1.38
PMS1-205ENST00000409985 COL4A6Q14031 1691 aa23.66■■□□□ 1.38
PMS1-205ENST00000409985 C2orf81A6NN90 581 aa23.66■■□□□ 1.38
PMS1-205ENST00000409985 H3BNC9 293 aa23.66■■□□□ 1.38
PMS1-205ENST00000409985 INSIG1O15503 277 aa23.66■■□□□ 1.38
PMS1-205ENST00000409985 SMIM18P0DKX4 95 aa23.66■■□□□ 1.38
PMS1-205ENST00000409985 GATMP50440 423 aa23.66■■□□□ 1.38
PMS1-205ENST00000409985 PPIGQ13427 754 aaKnown RBP eCLIP23.66■■□□□ 1.386e-7■■□□□ 11.6
PMS1-205ENST00000409985 RNF19BQ6ZMZ0 732 aa23.66■■□□□ 1.38
PMS1-205ENST00000409985 ATP6V1E2Q96A05 226 aa23.66■■□□□ 1.38
PMS1-205ENST00000409985 MYEOVQ96EZ4 313 aa23.66■■□□□ 1.38
PMS1-205ENST00000409985 CASD1Q96PB1 797 aa23.66■■□□□ 1.38
PMS1-205ENST00000409985 VCX3AQ9NNX9 186 aa23.66■■□□□ 1.38
PMS1-205ENST00000409985 A0A0J9YYE9 177 aa23.65■■□□□ 1.38
PMS1-205ENST00000409985 AQP12BA6NM10 295 aa23.65■■□□□ 1.38
PMS1-205ENST00000409985 UBXN8O00124 270 aa23.65■■□□□ 1.38
PMS1-205ENST00000409985 RHOBTB1O94844 696 aa23.65■■□□□ 1.38
PMS1-205ENST00000409985 RPS17P08708 135 aaKnown RBP23.65■■□□□ 1.38
PMS1-205ENST00000409985 HSD17B1P14061 328 aa23.65■■□□□ 1.38
PMS1-205ENST00000409985 IDO1P14902 403 aa23.65■■□□□ 1.38
PMS1-205ENST00000409985 GSTT1P30711 240 aa23.65■■□□□ 1.38
PMS1-205ENST00000409985 RGS19P49795 217 aa23.65■■□□□ 1.38
PMS1-205ENST00000409985 OXCT1P55809 520 aa23.65■■□□□ 1.38
PMS1-205ENST00000409985 BNIP2Q12982 314 aa23.65■■□□□ 1.38
PMS1-205ENST00000409985 PFKFB4Q16877 469 aa23.65■■□□□ 1.38
PMS1-205ENST00000409985 THEMIS2Q5TEJ8 643 aa23.65■■□□□ 1.38
PMS1-205ENST00000409985 ANKS6Q68DC2 871 aa23.65■■□□□ 1.38
PMS1-205ENST00000409985 FUT10Q6P4F1 479 aa23.65■■□□□ 1.38
PMS1-205ENST00000409985 AQP12AQ8IXF9 295 aa23.65■■□□□ 1.38
PMS1-205ENST00000409985 SH3RF2Q8TEC5 729 aa23.65■■□□□ 1.38
PMS1-205ENST00000409985 PLD4Q96BZ4 506 aa23.65■■□□□ 1.38
PMS1-205ENST00000409985 TRIM15Q9C019 465 aa23.65■■□□□ 1.38
PMS1-205ENST00000409985 TRIM4Q9C037 500 aa23.65■■□□□ 1.38
PMS1-205ENST00000409985 CRISPLD1Q9H336 500 aa23.65■■□□□ 1.38
PMS1-205ENST00000409985 MUC13Q9H3R2 512 aa23.65■■□□□ 1.38
PMS1-205ENST00000409985 GID8Q9NWU2 228 aa23.65■■□□□ 1.38
PMS1-205ENST00000409985 UBAP1Q9NZ09 502 aa23.65■■□□□ 1.38
PMS1-205ENST00000409985 PCDHB7Q9Y5E2 793 aa23.65■■□□□ 1.38
PMS1-205ENST00000409985 PDE4DIPQ5VU43 2346 aa23.65■■□□□ 1.38
PMS1-205ENST00000409985 CDH23Q9H251 3354 aa23.65■■□□□ 1.38
PMS1-205ENST00000409985 H3BMM5 538 aa23.64■■□□□ 1.38
PMS1-205ENST00000409985 CLASP2O75122 1294 aaKnown RBP23.64■■□□□ 1.38
PMS1-205ENST00000409985 GFAPP14136 432 aa23.64■■□□□ 1.38
PMS1-205ENST00000409985 TCN1P20061 433 aaPredicted RBP23.64■■□□□ 1.38
PMS1-205ENST00000409985 GRIA2P42262 883 aa23.64■■□□□ 1.38
PMS1-205ENST00000409985 MAGEA10P43363 369 aaPredicted RBP23.64■■□□□ 1.38
PMS1-205ENST00000409985 CLCN4P51793 760 aa23.64■■□□□ 1.38
PMS1-205ENST00000409985 WDR5P61964 334 aaKnown RBP23.64■■□□□ 1.38
PMS1-205ENST00000409985 CLCQ05315 142 aa23.64■■□□□ 1.38
PMS1-205ENST00000409985 MAP7D1Q3KQU3 841 aa23.64■■□□□ 1.38
PMS1-205ENST00000409985 C6orf10Q5SRN2 563 aa23.64■■□□□ 1.38
PMS1-205ENST00000409985 DHFR2Q86XF0 187 aa23.64■■□□□ 1.38
PMS1-205ENST00000409985 FBXO39Q8N4B4 442 aa23.64■■□□□ 1.38
PMS1-205ENST00000409985 DDI1Q8WTU0 396 aa23.64■■□□□ 1.38
PMS1-205ENST00000409985 OSBPL11Q9BXB4 747 aa23.64■■□□□ 1.38
PMS1-205ENST00000409985 CWH43Q9H720 699 aa23.64■■□□□ 1.38
PMS1-205ENST00000409985 CHD7Q9P2D1 2997 aa23.64■■□□□ 1.38
PMS1-205ENST00000409985 ABHD14A-ACY1A0A1B0GW23 586 aa23.64■■□□□ 1.37
PMS1-205ENST00000409985 HOXA2O43364 376 aa23.64■■□□□ 1.37
PMS1-205ENST00000409985 NDUFS3O75489 264 aa23.64■■□□□ 1.37
PMS1-205ENST00000409985 SOAT2O75908 522 aa23.64■■□□□ 1.37
PMS1-205ENST00000409985 FAM58BPP0C7Q3 252 aa23.64■■□□□ 1.37
PMS1-205ENST00000409985 PRR35P0CG20 571 aa23.64■■□□□ 1.37
PMS1-205ENST00000409985 SLC6A4P31645 630 aa23.64■■□□□ 1.37
PMS1-205ENST00000409985 KCNQ1P51787 676 aa23.64■■□□□ 1.37
PMS1-205ENST00000409985 ADARP55265 1226 aaKnown RBP23.64■■□□□ 1.37
PMS1-205ENST00000409985 CDH13P55290 713 aa23.64■■□□□ 1.37
PMS1-205ENST00000409985 POLE2P56282 527 aa23.64■■□□□ 1.37
PMS1-205ENST00000409985 TXNL4AP83876 142 aaKnown RBP23.64■■□□□ 1.37
PMS1-205ENST00000409985 DYNC1I2Q13409 638 aaKnown RBP23.64■■□□□ 1.37
PMS1-205ENST00000409985 SETMARQ53H47 684 aaPredicted RBP23.64■■□□□ 1.37
PMS1-205ENST00000409985 IL31Q6EBC2 164 aa23.64■■□□□ 1.37
PMS1-205ENST00000409985 FAM156AQ8NDB6 213 aa23.64■■□□□ 1.37
PMS1-205ENST00000409985 EME1Q96AY2 570 aa23.64■■□□□ 1.37
PMS1-205ENST00000409985 PRICKLE1Q96MT3 831 aaPredicted RBP23.64■■□□□ 1.37
PMS1-205ENST00000409985 PCDHAC1Q9H158 963 aa23.64■■□□□ 1.37
PMS1-205ENST00000409985 RNF112Q9ULX5 631 aa23.64■■□□□ 1.37
PMS1-205ENST00000409985 MED16Q9Y2X0 877 aa23.64■■□□□ 1.37
PMS1-205ENST00000409985 GBF1Q92538 1859 aa23.63■■□□□ 1.37
PMS1-205ENST00000409985 A0A0D9SEW6 157 aa23.63■■□□□ 1.37
PMS1-205ENST00000409985 TYW5A2RUC4 315 aaKnown RBP23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms