RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 SLC2A4P14672 509 aa14.4□□□□□ -0.1
MCF2L-210ENST00000409954 ETV5P41161 510 aa14.4□□□□□ -0.1
MCF2L-210ENST00000409954 CD86P42081 329 aa14.4□□□□□ -0.1
MCF2L-210ENST00000409954 SLC1A1P43005 524 aa14.4□□□□□ -0.1
MCF2L-210ENST00000409954 C16orf72Q14CZ0 275 aa14.4□□□□□ -0.1
MCF2L-210ENST00000409954 TGIF1Q15583 401 aa14.4□□□□□ -0.1
MCF2L-210ENST00000409954 HENMT1Q5T8I9 393 aaKnown RBP14.4□□□□□ -0.1
MCF2L-210ENST00000409954 SLC9A4Q6AI14 798 aa14.4□□□□□ -0.1
MCF2L-210ENST00000409954 CCDC70Q6NSX1 233 aa14.4□□□□□ -0.1
MCF2L-210ENST00000409954 IYDQ6PHW0 289 aa14.4□□□□□ -0.1
MCF2L-210ENST00000409954 CHST15Q7LFX5 561 aaPredicted RBP14.4□□□□□ -0.1
MCF2L-210ENST00000409954 NT5DC3Q86UY8 548 aa14.4□□□□□ -0.1
MCF2L-210ENST00000409954 CPNE8Q86YQ8 564 aa14.4□□□□□ -0.1
MCF2L-210ENST00000409954 SFRP1Q8N474 314 aa14.4□□□□□ -0.1
MCF2L-210ENST00000409954 CNTD1Q8N815 330 aa14.4□□□□□ -0.1
MCF2L-210ENST00000409954 AVL9Q8NBF6 648 aa14.4□□□□□ -0.1
MCF2L-210ENST00000409954 PATE1Q8WXA2 126 aa14.4□□□□□ -0.1
MCF2L-210ENST00000409954 AHCYL2Q96HN2 611 aaKnown RBP14.4□□□□□ -0.1
MCF2L-210ENST00000409954 SMIM14Q96QK8 99 aa14.4□□□□□ -0.1
MCF2L-210ENST00000409954 WDR24Q96S15 920 aa14.4□□□□□ -0.1
MCF2L-210ENST00000409954 NUDT22Q9BRQ3 303 aa14.4□□□□□ -0.1
MCF2L-210ENST00000409954 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.4□□□□□ -0.1
MCF2L-210ENST00000409954 ASPSCR1Q9BZE9 553 aa14.4□□□□□ -0.1
MCF2L-210ENST00000409954 STN1Q9H668 368 aaKnown RBP14.4□□□□□ -0.1
MCF2L-210ENST00000409954 ZFYVE1Q9HBF4 777 aa14.4□□□□□ -0.1
MCF2L-210ENST00000409954 MAGEE1Q9HCI5 957 aa14.4□□□□□ -0.1
MCF2L-210ENST00000409954 DDX56Q9NY93 547 aaKnown RBP14.4□□□□□ -0.1
MCF2L-210ENST00000409954 PDP2Q9P2J9 529 aa14.4□□□□□ -0.1
MCF2L-210ENST00000409954 PLEKHM1Q9Y4G2 1056 aa14.4□□□□□ -0.1
MCF2L-210ENST00000409954 HEY1Q9Y5J3 304 aa14.4□□□□□ -0.1
MCF2L-210ENST00000409954 TRBV23OR9-2A0A075B6M9 112 aa14.39□□□□□ -0.11
MCF2L-210ENST00000409954 GPR89AB7ZAQ6 455 aa14.39□□□□□ -0.11
MCF2L-210ENST00000409954 B8ZZF3 427 aa14.39□□□□□ -0.11
MCF2L-210ENST00000409954 KCNK1O00180 336 aa14.39□□□□□ -0.11
MCF2L-210ENST00000409954 APOL1O14791 398 aa14.39□□□□□ -0.11
MCF2L-210ENST00000409954 PPP1R12AO14974 1030 aaPredicted RBP14.39□□□□□ -0.11
MCF2L-210ENST00000409954 MTA2O94776 668 aa14.39□□□□□ -0.11
MCF2L-210ENST00000409954 MMP2P08253 660 aa14.39□□□□□ -0.11
MCF2L-210ENST00000409954 GPR89BP0CG08 455 aa14.39□□□□□ -0.11
MCF2L-210ENST00000409954 SFTPCP11686 197 aa14.39□□□□□ -0.11
MCF2L-210ENST00000409954 CCL4P13236 92 aa14.39□□□□□ -0.11
MCF2L-210ENST00000409954 NR2C2P49116 596 aa14.39□□□□□ -0.11
MCF2L-210ENST00000409954 CLCNKAP51800 687 aa14.39□□□□□ -0.11
MCF2L-210ENST00000409954 AP1B1Q10567 949 aa14.39□□□□□ -0.11
MCF2L-210ENST00000409954 LY6DQ14210 128 aa14.39□□□□□ -0.11
MCF2L-210ENST00000409954 SLC14A2Q15849 920 aa14.39□□□□□ -0.11
MCF2L-210ENST00000409954 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.39□□□□□ -0.11
MCF2L-210ENST00000409954 KIAA1614Q5VZ46 1190 aa14.39□□□□□ -0.11
MCF2L-210ENST00000409954 WDR74Q6RFH5 385 aaPredicted RBP14.39□□□□□ -0.11
MCF2L-210ENST00000409954 LYSMD3Q7Z3D4 306 aa14.39□□□□□ -0.11
MCF2L-210ENST00000409954 SLC9B2Q86UD5 537 aa14.39□□□□□ -0.11
MCF2L-210ENST00000409954 ZFAND4Q86XD8 727 aa14.39□□□□□ -0.11
MCF2L-210ENST00000409954 PLD5Q8N7P1 536 aa14.39□□□□□ -0.11
MCF2L-210ENST00000409954 OR10G6Q8NH81 332 aa14.39□□□□□ -0.11
MCF2L-210ENST00000409954 SLC25A51Q9H1U9 297 aa14.39□□□□□ -0.11
MCF2L-210ENST00000409954 CARD9Q9H257 536 aa14.39□□□□□ -0.11
MCF2L-210ENST00000409954 NHEJ1Q9H9Q4 299 aaPredicted RBP14.39□□□□□ -0.11
MCF2L-210ENST00000409954 TRIM39Q9HCM9 518 aa14.39□□□□□ -0.11
MCF2L-210ENST00000409954 SARS2Q9NP81 518 aaKnown RBP14.39□□□□□ -0.11
MCF2L-210ENST00000409954 INTUQ9ULD6 942 aa14.39□□□□□ -0.11
MCF2L-210ENST00000409954 COL27A1Q8IZC6 1860 aaPredicted RBP14.39□□□□□ -0.11
MCF2L-210ENST00000409954 KIR2DS5A0A0G2JLQ3 304 aa14.38□□□□□ -0.11
MCF2L-210ENST00000409954 A0A0G2JNG1 304 aa14.38□□□□□ -0.11
MCF2L-210ENST00000409954 B4E171 279 aa14.38□□□□□ -0.11
MCF2L-210ENST00000409954 STMND1H3BQB6 276 aa14.38□□□□□ -0.11
MCF2L-210ENST00000409954 KIR2DS3K7RE56 304 aa14.38□□□□□ -0.11
MCF2L-210ENST00000409954 NUAK1O60285 661 aa14.38□□□□□ -0.11
MCF2L-210ENST00000409954 ATP1A1P05023 1023 aaKnown RBP14.38□□□□□ -0.11
MCF2L-210ENST00000409954 FGF3P11487 239 aaPredicted RBP14.38□□□□□ -0.11
MCF2L-210ENST00000409954 PLA2G2AP14555 144 aa14.38□□□□□ -0.11
MCF2L-210ENST00000409954 TSPAN7P41732 249 aa14.38□□□□□ -0.11
MCF2L-210ENST00000409954 CDK18Q07002 472 aa14.38□□□□□ -0.11
MCF2L-210ENST00000409954 KIR2DS5Q14953 304 aa14.38□□□□□ -0.11
MCF2L-210ENST00000409954 TCEAL1Q15170 157 aa14.38□□□□□ -0.11
MCF2L-210ENST00000409954 TEX44Q53QW1 395 aa14.38□□□□□ -0.11
MCF2L-210ENST00000409954 NKAIN2Q5VXU1 208 aa14.38□□□□□ -0.11
MCF2L-210ENST00000409954 PDPK2PQ6A1A2 396 aa14.38□□□□□ -0.11
MCF2L-210ENST00000409954 TMC3Q7Z5M5 1100 aa14.38□□□□□ -0.11
MCF2L-210ENST00000409954 TRIM74Q86UV6 250 aa14.38□□□□□ -0.11
MCF2L-210ENST00000409954 RHOT1Q8IXI2 618 aa14.38□□□□□ -0.11
MCF2L-210ENST00000409954 RCBTB1Q8NDN9 531 aa14.38□□□□□ -0.11
MCF2L-210ENST00000409954 LRRN4Q8WUT4 740 aa14.38□□□□□ -0.11
MCF2L-210ENST00000409954 IMP4Q96G21 291 aaKnown RBP14.38□□□□□ -0.11
MCF2L-210ENST00000409954 CCDC74BQ96LY2 380 aa14.38□□□□□ -0.11
MCF2L-210ENST00000409954 CHP1Q99653 195 aa14.38□□□□□ -0.11
MCF2L-210ENST00000409954 HERPUD2Q9BSE4 406 aa14.38□□□□□ -0.11
MCF2L-210ENST00000409954 DDA1Q9BW61 102 aa14.38□□□□□ -0.11
MCF2L-210ENST00000409954 EPB41L1Q9H4G0 881 aa14.38□□□□□ -0.11
MCF2L-210ENST00000409954 ABHD10Q9NUJ1 306 aa14.38□□□□□ -0.11
MCF2L-210ENST00000409954 FOXJ2Q9P0K8 574 aa14.38□□□□□ -0.11
MCF2L-210ENST00000409954 C3orf70A6NLC5 250 aaPredicted RBP14.37□□□□□ -0.11
MCF2L-210ENST00000409954 AGRPO00253 132 aa14.37□□□□□ -0.11
MCF2L-210ENST00000409954 GRID2O43424 1007 aa14.37□□□□□ -0.11
MCF2L-210ENST00000409954 DUX1O43812 170 aa14.37□□□□□ -0.11
MCF2L-210ENST00000409954 SLC25A14O95258 325 aaPredicted RBP14.37□□□□□ -0.11
MCF2L-210ENST00000409954 THRAP10827 490 aa14.37□□□□□ -0.11
MCF2L-210ENST00000409954 ATP1A2P50993 1020 aa14.37□□□□□ -0.11
MCF2L-210ENST00000409954 RAB15P59190 212 aa14.37□□□□□ -0.11
MCF2L-210ENST00000409954 HHEXQ03014 270 aa14.37□□□□□ -0.11
MCF2L-210ENST00000409954 ZBTB17Q13105 803 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms