RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 SPATC1Q76KD6 591 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 KIAA0895Q8NCT3 520 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 OR4K2Q8NGD2 314 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 GDPD5Q8WTR4 605 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 AIF1LQ9BQI0 150 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 SEMA4AQ9H3S1 761 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 CARS2Q9HA77 564 aaKnown RBP8.38□□□□□ -1.07
SCN9A-203ENST00000409672 UBAP1Q9NZ09 502 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 TBC1D24Q9ULP9 559 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 PCDHGC4Q9Y5F7 938 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 KCNE2Q9Y6J6 123 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 ARHGEF5Q12774 1597 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 CCDC162PA2VCL2 907 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 IFNA6P05013 189 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 KDELR1P24390 212 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 CDH5P33151 784 aaPredicted RBP8.38□□□□□ -1.07
SCN9A-203ENST00000409672 TOB1P50616 345 aaPredicted RBP8.38□□□□□ -1.07
SCN9A-203ENST00000409672 DDR1Q08345 913 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 TRIM28Q13263 835 aaKnown RBP8.38□□□□□ -1.07
SCN9A-203ENST00000409672 ZNF598Q86UK7 904 aaKnown RBP8.38□□□□□ -1.07
SCN9A-203ENST00000409672 ANKRD46Q86W74 232 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 TSSK3Q96PN8 268 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 IL22Q9GZX6 179 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 OR51V1Q9H2C8 321 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 MEAF6Q9HAF1 191 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 SEC14L3Q9UDX4 400 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 NCOA3Q9Y6Q9 1424 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 A0A1W2PQJ5 194 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 CLOCKO15516 846 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 TNFP01375 233 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 POU2F1P14859 743 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 CASP5P51878 434 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 ILF3Q12906 894 aaKnown RBP eCLIP8.38□□□□□ -1.074e-7■□□□□ 9.4
SCN9A-203ENST00000409672 RALGPS2Q86X27 583 aaPredicted RBP8.38□□□□□ -1.07
SCN9A-203ENST00000409672 CCNJLQ8IV13 435 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 ZZZ3Q8IYH5 903 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 USB1Q9BQ65 265 aaKnown RBP8.38□□□□□ -1.07
SCN9A-203ENST00000409672 FAM198AQ9UFP1 575 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 C9JVG2 144 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 FPGTO14772 594 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 FGF10O15520 208 aaPredicted RBP8.38□□□□□ -1.07
SCN9A-203ENST00000409672 CCNB2O95067 398 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 SLC26A3P40879 764 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 IL12RB1P42701 662 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 ZNF846Q147U1 533 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 TOR1AIP1Q5JTV8 583 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 IQCHQ86VS3 1027 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 C1QTNF1Q9BXJ1 281 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 ASB7Q9H672 318 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 C3orf14Q9HBI5 128 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 SLC40A1Q9NP59 571 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 CHD4Q14839 1912 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 LTA4HP09960 611 aaKnown RBP8.38□□□□□ -1.07
SCN9A-203ENST00000409672 SRYQ05066 204 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 CRHR2Q13324 411 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 DNASE1L3Q13609 305 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 CLVS1Q8IUQ0 354 aaPredicted RBP8.38□□□□□ -1.07
SCN9A-203ENST00000409672 DNAJC5Q9H3Z4 198 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 PIGUQ9H490 435 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 BLOC1S4Q9NUP1 217 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 NKIRAS2Q9NYR9 191 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 SPEF1Q9Y4P9 236 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 AP4S1Q9Y587 144 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 TBX1O43435 398 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 SHOX2O60902 331 aaPredicted RBP8.38□□□□□ -1.07
SCN9A-203ENST00000409672 CDC123O75794 336 aaPredicted RBP8.38□□□□□ -1.07
SCN9A-203ENST00000409672 CYP1A1P04798 512 aaPredicted RBP8.38□□□□□ -1.07
SCN9A-203ENST00000409672 PTPN9P43378 593 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 EIF2B2P49770 351 aaKnown RBP8.38□□□□□ -1.07
SCN9A-203ENST00000409672 NAGLUP54802 743 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 ZNF268Q14587 947 aaPredicted RBP8.38□□□□□ -1.07
SCN9A-203ENST00000409672 ZNF540Q8NDQ6 660 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 FRMD8Q9BZ67 464 aaPredicted RBP8.38□□□□□ -1.07
SCN9A-203ENST00000409672 TPK1Q9H3S4 243 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 AGO3Q9H9G7 860 aaKnown RBP8.38□□□□□ -1.07
SCN9A-203ENST00000409672 SMURF1Q9HCE7 757 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 GLYATL1P3A0A0U1RQE8 302 aa8.37□□□□□ -1.07
SCN9A-203ENST00000409672 UGT2B17O75795 530 aa8.37□□□□□ -1.07
SCN9A-203ENST00000409672 MOXD1Q6UVY6 613 aa8.37□□□□□ -1.07
SCN9A-203ENST00000409672 GPRIN3Q6ZVF9 776 aa8.37□□□□□ -1.07
SCN9A-203ENST00000409672 ZNF607Q96SK3 696 aa8.37□□□□□ -1.07
SCN9A-203ENST00000409672 SPATA5L1Q9BVQ7 753 aa8.37□□□□□ -1.07
SCN9A-203ENST00000409672 GMPPBQ9Y5P6 360 aa8.37□□□□□ -1.07
SCN9A-203ENST00000409672 CPQQ9Y646 472 aa8.37□□□□□ -1.07
SCN9A-203ENST00000409672 KIF20BQ96Q89 1820 aa8.37□□□□□ -1.07
SCN9A-203ENST00000409672 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.37□□□□□ -1.07
SCN9A-203ENST00000409672 BTN3A3O00478 584 aa8.37□□□□□ -1.07
SCN9A-203ENST00000409672 CLPTM1O96005 669 aa8.37□□□□□ -1.07
SCN9A-203ENST00000409672 SLC5A3P53794 718 aa8.37□□□□□ -1.07
SCN9A-203ENST00000409672 SULT2A1Q06520 285 aa8.37□□□□□ -1.07
SCN9A-203ENST00000409672 LYPLAL1Q5VWZ2 237 aa8.37□□□□□ -1.07
SCN9A-203ENST00000409672 ARMC3Q5W041 872 aa8.37□□□□□ -1.07
SCN9A-203ENST00000409672 ZNF613Q6PF04 617 aa8.37□□□□□ -1.07
SCN9A-203ENST00000409672 SLC47A1Q96FL8 570 aa8.37□□□□□ -1.07
SCN9A-203ENST00000409672 PWWP2AQ96N64 755 aa8.37□□□□□ -1.07
SCN9A-203ENST00000409672 NAT9Q9BTE0 207 aa8.37□□□□□ -1.07
SCN9A-203ENST00000409672 CKLFQ9UBR5 152 aa8.37□□□□□ -1.07
SCN9A-203ENST00000409672 SAMHD1Q9Y3Z3 626 aaKnown RBP8.37□□□□□ -1.07
SCN9A-203ENST00000409672 RAI2Q9Y5P3 530 aa8.37□□□□□ -1.07
SCN9A-203ENST00000409672 B4GALT2O60909 372 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms