RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 SIN3BO75182 1162 aa11.35□□□□□ -0.59
SNX13-202ENST00000409604 CBX6O95503 412 aa11.35□□□□□ -0.59
SNX13-202ENST00000409604 HNRNPA1P09651 372 aaKnown RBP eCLIP11.35□□□□□ -0.59
SNX13-202ENST00000409604 MAOBP27338 520 aa11.35□□□□□ -0.59
SNX13-202ENST00000409604 ACTR1BP42025 376 aa11.35□□□□□ -0.59
SNX13-202ENST00000409604 MTHFRP42898 656 aa11.35□□□□□ -0.59
SNX13-202ENST00000409604 ARSDP51689 593 aa11.35□□□□□ -0.59
SNX13-202ENST00000409604 ACTR1AP61163 376 aa11.35□□□□□ -0.59
SNX13-202ENST00000409604 TRAF2Q12933 501 aa11.35□□□□□ -0.59
SNX13-202ENST00000409604 NAE1Q13564 534 aa11.35□□□□□ -0.59
SNX13-202ENST00000409604 DPYSQ14117 519 aa11.35□□□□□ -0.59
SNX13-202ENST00000409604 CYP1B1Q16678 543 aa11.35□□□□□ -0.59
SNX13-202ENST00000409604 HIST2H2ACQ16777 129 aaPredicted RBP11.35□□□□□ -0.59
SNX13-202ENST00000409604 CLEC6AQ6EIG7 209 aa11.35□□□□□ -0.59
SNX13-202ENST00000409604 HIST2H2AA3Q6FI13 130 aa11.35□□□□□ -0.59
SNX13-202ENST00000409604 TRPM8Q7Z2W7 1104 aa11.35□□□□□ -0.59
SNX13-202ENST00000409604 CAND1Q86VP6 1230 aaKnown RBP11.35□□□□□ -0.59
SNX13-202ENST00000409604 CXorf38Q8TB03 319 aa11.35□□□□□ -0.59
SNX13-202ENST00000409604 PHOSPHO2Q8TCD6 241 aa11.35□□□□□ -0.59
SNX13-202ENST00000409604 SLC44A1Q8WWI5 657 aa11.35□□□□□ -0.59
SNX13-202ENST00000409604 CHFRQ96EP1 664 aa11.35□□□□□ -0.59
SNX13-202ENST00000409604 MRPL46Q9H2W6 279 aaKnown RBP11.35□□□□□ -0.59
SNX13-202ENST00000409604 GNPTGQ9UJJ9 305 aa11.35□□□□□ -0.59
SNX13-202ENST00000409604 GMEB2Q9UKD1 530 aa11.35□□□□□ -0.59
SNX13-202ENST00000409604 CDH7Q9ULB5 785 aa11.35□□□□□ -0.59
SNX13-202ENST00000409604 USP3Q9Y6I4 520 aa11.35□□□□□ -0.59
SNX13-202ENST00000409604 WDR47O94967 919 aa11.35□□□□□ -0.59
SNX13-202ENST00000409604 FAM107AO95990 144 aa11.35□□□□□ -0.59
SNX13-202ENST00000409604 AHSGP02765 367 aa11.35□□□□□ -0.59
SNX13-202ENST00000409604 NTRK1P04629 796 aa11.35□□□□□ -0.59
SNX13-202ENST00000409604 PGM1P36871 562 aa11.35□□□□□ -0.59
SNX13-202ENST00000409604 GNPDA1P46926 289 aa11.35□□□□□ -0.59
SNX13-202ENST00000409604 PREPP48147 710 aa11.35□□□□□ -0.59
SNX13-202ENST00000409604 CDKN1CP49918 316 aaPredicted RBP11.35□□□□□ -0.59
SNX13-202ENST00000409604 TBCCQ15814 346 aa11.35□□□□□ -0.59
SNX13-202ENST00000409604 LEMD2Q8NC56 503 aa11.35□□□□□ -0.59
SNX13-202ENST00000409604 STYXQ8WUJ0 223 aa11.35□□□□□ -0.59
SNX13-202ENST00000409604 PGM2Q96G03 612 aa11.35□□□□□ -0.59
SNX13-202ENST00000409604 FAM129AQ9BZQ8 928 aa11.35□□□□□ -0.59
SNX13-202ENST00000409604 DNAJC28Q9NX36 388 aa11.35□□□□□ -0.59
SNX13-202ENST00000409604 LINC00032P0C843 101 aa11.34□□□□□ -0.59
SNX13-202ENST00000409604 EEF1DP29692 281 aaKnown RBP11.34□□□□□ -0.59
SNX13-202ENST00000409604 GPC1P35052 558 aa11.34□□□□□ -0.59
SNX13-202ENST00000409604 GDF5P43026 501 aa11.34□□□□□ -0.59
SNX13-202ENST00000409604 MUM1Q2TAK8 710 aa11.34□□□□□ -0.59
SNX13-202ENST00000409604 RIPOR1Q6ZS17 1223 aa11.34□□□□□ -0.59
SNX13-202ENST00000409604 GIMAP7Q8NHV1 300 aa11.34□□□□□ -0.59
SNX13-202ENST00000409604 ADAMTS19Q8TE59 1207 aa11.34□□□□□ -0.59
SNX13-202ENST00000409604 MYEOVQ96EZ4 313 aa11.34□□□□□ -0.59
SNX13-202ENST00000409604 RAB3IPQ96QF0 476 aaPredicted RBP11.34□□□□□ -0.59
SNX13-202ENST00000409604 ERVW-1Q9UQF0 538 aa11.34□□□□□ -0.59
SNX13-202ENST00000409604 SNX8Q9Y5X2 465 aa11.34□□□□□ -0.59
SNX13-202ENST00000409604 NUMBLQ9Y6R0 609 aa11.34□□□□□ -0.59
SNX13-202ENST00000409604 TCRBV21S2A2A0A5A6 115 aa11.34□□□□□ -0.59
SNX13-202ENST00000409604 C16orf96A6NNT2 1141 aa11.34□□□□□ -0.59
SNX13-202ENST00000409604 TM7SF2O76062 418 aa11.34□□□□□ -0.59
SNX13-202ENST00000409604 HMGA1P17096 107 aaKnown RBP11.34□□□□□ -0.59
SNX13-202ENST00000409604 HNF1BP35680 557 aa11.34□□□□□ -0.59
SNX13-202ENST00000409604 ARCN1P48444 511 aaKnown RBP11.34□□□□□ -0.59
SNX13-202ENST00000409604 RING1Q06587 406 aa11.34□□□□□ -0.59
SNX13-202ENST00000409604 SMYD5Q6GMV2 418 aa11.34□□□□□ -0.59
SNX13-202ENST00000409604 PARM1Q6UWI2 310 aa11.34□□□□□ -0.59
SNX13-202ENST00000409604 RGS9BPQ6ZS82 235 aa11.34□□□□□ -0.59
SNX13-202ENST00000409604 SELENOMQ8WWX9 145 aa11.34□□□□□ -0.59
SNX13-202ENST00000409604 CDK15Q96Q40 435 aa11.34□□□□□ -0.59
SNX13-202ENST00000409604 PHPT1Q9NRX4 125 aaPredicted RBP11.34□□□□□ -0.59
SNX13-202ENST00000409604 SOX13Q9UN79 622 aa11.34□□□□□ -0.59
SNX13-202ENST00000409604 HHLA1C9JL84 531 aa11.34□□□□□ -0.59
SNX13-202ENST00000409604 AGPSO00116 658 aa11.34□□□□□ -0.59
SNX13-202ENST00000409604 TNFRSF10BO14763 440 aa11.34□□□□□ -0.59
SNX13-202ENST00000409604 MID1O15344 667 aa11.34□□□□□ -0.59
SNX13-202ENST00000409604 CCDC22O60826 627 aa11.34□□□□□ -0.59
SNX13-202ENST00000409604 CXCL10P02778 98 aa11.34□□□□□ -0.59
SNX13-202ENST00000409604 MPOP05164 745 aa11.34□□□□□ -0.59
SNX13-202ENST00000409604 MSX2P35548 267 aaPredicted RBP11.34□□□□□ -0.59
SNX13-202ENST00000409604 ACTN3Q08043 901 aaPredicted RBP11.34□□□□□ -0.59
SNX13-202ENST00000409604 STN1Q9H668 368 aaKnown RBP11.34□□□□□ -0.59
SNX13-202ENST00000409604 SLC13A4Q9UKG4 626 aa11.34□□□□□ -0.59
SNX13-202ENST00000409604 SCN4AP35499 1836 aa11.33□□□□□ -0.59
SNX13-202ENST00000409604 WNT9AO14904 365 aa11.33□□□□□ -0.59
SNX13-202ENST00000409604 ANXA5P08758 320 aa11.33□□□□□ -0.59
SNX13-202ENST00000409604 ZNF8P17098 575 aaPredicted RBP11.33□□□□□ -0.59
SNX13-202ENST00000409604 ALDH4A1P30038 563 aa11.33□□□□□ -0.59
SNX13-202ENST00000409604 CLCN5P51795 746 aa11.33□□□□□ -0.59
SNX13-202ENST00000409604 SIX1Q15475 284 aaPredicted RBP11.33□□□□□ -0.59
SNX13-202ENST00000409604 SF1Q15637 639 aaKnown RBP11.33□□□□□ -0.59
SNX13-202ENST00000409604 TSNAXIP1Q2TAA8 658 aa11.33□□□□□ -0.59
SNX13-202ENST00000409604 UAP1L1Q3KQV9 507 aa11.33□□□□□ -0.59
SNX13-202ENST00000409604 GPR174Q9BXC1 333 aa11.33□□□□□ -0.59
SNX13-202ENST00000409604 PPCSQ9HAB8 311 aa11.33□□□□□ -0.59
SNX13-202ENST00000409604 PARVBQ9HBI1 364 aa11.33□□□□□ -0.59
SNX13-202ENST00000409604 POLMQ9NP87 494 aaPredicted RBP11.33□□□□□ -0.59
SNX13-202ENST00000409604 CD207Q9UJ71 328 aa11.33□□□□□ -0.59
SNX13-202ENST00000409604 MGAT4DA6NG13 374 aa11.33□□□□□ -0.6
SNX13-202ENST00000409604 E2F6O75461 281 aa11.33□□□□□ -0.6
SNX13-202ENST00000409604 SERPINE1P05121 402 aa11.33□□□□□ -0.6
SNX13-202ENST00000409604 GGT5P36269 586 aa11.33□□□□□ -0.6
SNX13-202ENST00000409604 PRKAG1P54619 331 aa11.33□□□□□ -0.6
SNX13-202ENST00000409604 PRKAA1Q13131 559 aa11.33□□□□□ -0.6
SNX13-202ENST00000409604 KCNJ11Q14654 390 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms