RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 TSNAXIP1Q2TAA8 658 aa13.98□□□□□ -0.17
GPNMB-203ENST00000409458 GKAP1Q5VSY0 366 aaPredicted RBP13.98□□□□□ -0.17
GPNMB-203ENST00000409458 TXNDC11Q6PKC3 985 aa13.98□□□□□ -0.17
GPNMB-203ENST00000409458 ZCCHC23Q6ZST2 131 aa13.98□□□□□ -0.17
GPNMB-203ENST00000409458 OTOAQ7RTW8 1153 aa13.98□□□□□ -0.17
GPNMB-203ENST00000409458 HSD11B1LQ7Z5J1 315 aa13.98□□□□□ -0.17
GPNMB-203ENST00000409458 TTC7BQ86TV6 843 aa13.98□□□□□ -0.17
GPNMB-203ENST00000409458 TRIM42Q8IWZ5 723 aa13.98□□□□□ -0.17
GPNMB-203ENST00000409458 FSTL5Q8N475 847 aaPredicted RBP13.98□□□□□ -0.17
GPNMB-203ENST00000409458 TMEM151AQ8N4L1 468 aa13.98□□□□□ -0.17
GPNMB-203ENST00000409458 UBXN10Q96LJ8 280 aa13.98□□□□□ -0.17
GPNMB-203ENST00000409458 BOCQ9BWV1 1114 aa13.98□□□□□ -0.17
GPNMB-203ENST00000409458 P2RY12Q9H244 342 aa13.98□□□□□ -0.17
GPNMB-203ENST00000409458 CCDC68Q9H2F9 335 aa13.98□□□□□ -0.17
GPNMB-203ENST00000409458 UBE2ZQ9H832 354 aaPredicted RBP13.98□□□□□ -0.17
GPNMB-203ENST00000409458 POPDC3Q9HBV1 291 aa13.98□□□□□ -0.17
GPNMB-203ENST00000409458 PRSS16Q9NQE7 514 aa13.98□□□□□ -0.17
GPNMB-203ENST00000409458 CPSF2Q9P2I0 782 aaKnown RBP13.98□□□□□ -0.17
GPNMB-203ENST00000409458 CD84Q9UIB8 345 aa13.98□□□□□ -0.17
GPNMB-203ENST00000409458 CRLS1Q9UJA2 301 aa13.98□□□□□ -0.17
GPNMB-203ENST00000409458 STARD13Q9Y3M8 1113 aa13.98□□□□□ -0.17
GPNMB-203ENST00000409458 CKAP5Q14008 2032 aa13.97□□□□□ -0.17
GPNMB-203ENST00000409458 K7EQS6 105 aa13.97□□□□□ -0.17
GPNMB-203ENST00000409458 PLK4O00444 970 aa13.97□□□□□ -0.17
GPNMB-203ENST00000409458 SNX3O60493 162 aa13.97□□□□□ -0.17
GPNMB-203ENST00000409458 NIPSNAP2O75323 286 aa13.97□□□□□ -0.17
GPNMB-203ENST00000409458 RHOBTB1O94844 696 aa13.97□□□□□ -0.17
GPNMB-203ENST00000409458 APOA4P06727 396 aa13.97□□□□□ -0.17
GPNMB-203ENST00000409458 LTA4HP09960 611 aaKnown RBP13.97□□□□□ -0.17
GPNMB-203ENST00000409458 CCDC166P0CW27 439 aa13.97□□□□□ -0.17
GPNMB-203ENST00000409458 PKMP14618 531 aaKnown RBP13.97□□□□□ -0.17
GPNMB-203ENST00000409458 HNRNPLP14866 589 aaKnown RBP eCLIP13.97□□□□□ -0.17
GPNMB-203ENST00000409458 WASP42768 502 aa13.97□□□□□ -0.17
GPNMB-203ENST00000409458 PTPN5P54829 565 aa13.97□□□□□ -0.17
GPNMB-203ENST00000409458 ADARP55265 1226 aaKnown RBP13.97□□□□□ -0.17
GPNMB-203ENST00000409458 SEC13P55735 322 aa13.97□□□□□ -0.17
GPNMB-203ENST00000409458 BST1Q10588 318 aa13.97□□□□□ -0.17
GPNMB-203ENST00000409458 CCDC85BQ15834 202 aaPredicted RBP13.97□□□□□ -0.17
GPNMB-203ENST00000409458 SETMARQ53H47 684 aaPredicted RBP13.97□□□□□ -0.17
GPNMB-203ENST00000409458 CERS6Q6ZMG9 384 aa13.97□□□□□ -0.17
GPNMB-203ENST00000409458 RAB3IL1Q8TBN0 382 aa13.97□□□□□ -0.17
GPNMB-203ENST00000409458 ZNF398Q8TD17 642 aa13.97□□□□□ -0.17
GPNMB-203ENST00000409458 NAT14Q8WUY8 206 aa13.97□□□□□ -0.17
GPNMB-203ENST00000409458 PLEKHG4BQ96PX9 1271 aa13.97□□□□□ -0.17
GPNMB-203ENST00000409458 TSSK1BQ9BXA7 367 aa13.97□□□□□ -0.17
GPNMB-203ENST00000409458 PKD2L2Q9NZM6 624 aa13.97□□□□□ -0.17
GPNMB-203ENST00000409458 FAM50BQ9Y247 325 aa13.97□□□□□ -0.17
GPNMB-203ENST00000409458 STON1Q9Y6Q2 735 aa13.97□□□□□ -0.17
GPNMB-203ENST00000409458 TARM1B6A8C7 271 aa13.96□□□□□ -0.17
GPNMB-203ENST00000409458 SPECC1L-ADORA2AF8WAN1 911 aa13.96□□□□□ -0.17
GPNMB-203ENST00000409458 IL1BP01584 269 aa13.96□□□□□ -0.17
GPNMB-203ENST00000409458 ZNF37AP17032 561 aaPredicted RBP13.96□□□□□ -0.17
GPNMB-203ENST00000409458 NFKBIAP25963 317 aa13.96□□□□□ -0.17
GPNMB-203ENST00000409458 CTHP32929 405 aa13.96□□□□□ -0.17
GPNMB-203ENST00000409458 PSMD8P48556 350 aa13.96□□□□□ -0.17
GPNMB-203ENST00000409458 PDAP1Q13442 181 aaKnown RBP13.96□□□□□ -0.17
GPNMB-203ENST00000409458 ENPP2Q13822 863 aa13.96□□□□□ -0.17
GPNMB-203ENST00000409458 TECRLQ5HYJ1 363 aa13.96□□□□□ -0.17
GPNMB-203ENST00000409458 ATG16L1Q676U5 607 aa13.96□□□□□ -0.17
GPNMB-203ENST00000409458 ERAP2Q6P179 960 aa13.96□□□□□ -0.17
GPNMB-203ENST00000409458 ZYG11AQ6WRX3 759 aa13.96□□□□□ -0.17
GPNMB-203ENST00000409458 NUDT18Q6ZVK8 323 aa13.96□□□□□ -0.17
GPNMB-203ENST00000409458 SPATA21Q7Z572 469 aa13.96□□□□□ -0.17
GPNMB-203ENST00000409458 CCDC91Q7Z6B0 441 aa13.96□□□□□ -0.17
GPNMB-203ENST00000409458 MMAAQ8IVH4 418 aaKnown RBP13.96□□□□□ -0.17
GPNMB-203ENST00000409458 SUGP1Q8IWZ8 645 aaKnown RBP13.96□□□□□ -0.17
GPNMB-203ENST00000409458 CACNA2D3Q8IZS8 1091 aa13.96□□□□□ -0.17
GPNMB-203ENST00000409458 NXPE1Q8N323 547 aa13.96□□□□□ -0.17
GPNMB-203ENST00000409458 ZNF513Q8N8E2 541 aaPredicted RBP13.96□□□□□ -0.17
GPNMB-203ENST00000409458 TAS2R13Q9NYV9 303 aa13.96□□□□□ -0.17
GPNMB-203ENST00000409458 GALPQ9UBC7 116 aa13.96□□□□□ -0.17
GPNMB-203ENST00000409458 SUN2Q9UH99 717 aa13.96□□□□□ -0.17
GPNMB-203ENST00000409458 LRRK1Q38SD2 2015 aa13.96□□□□□ -0.18
GPNMB-203ENST00000409458 AGAP14A8MT82 685 aa13.95□□□□□ -0.18
GPNMB-203ENST00000409458 PRMT5O14744 637 aaPredicted RBP13.95□□□□□ -0.18
GPNMB-203ENST00000409458 SNNO75324 88 aaPredicted RBP13.95□□□□□ -0.18
GPNMB-203ENST00000409458 ESR1P03372 595 aa13.95□□□□□ -0.18
GPNMB-203ENST00000409458 MYL2P10916 166 aa13.95□□□□□ -0.18
GPNMB-203ENST00000409458 GM2AP17900 193 aa13.95□□□□□ -0.18
GPNMB-203ENST00000409458 RPS3P23396 243 aaKnown RBP eCLIP13.95□□□□□ -0.18
GPNMB-203ENST00000409458 TIE1P35590 1138 aa13.95□□□□□ -0.18
GPNMB-203ENST00000409458 SLC26A3P40879 764 aa13.95□□□□□ -0.18
GPNMB-203ENST00000409458 ETV3P41162 512 aa13.95□□□□□ -0.18
GPNMB-203ENST00000409458 TNFRSF4P43489 277 aa13.95□□□□□ -0.18
GPNMB-203ENST00000409458 KIR2DL1P43626 348 aaPredicted RBP13.95□□□□□ -0.18
GPNMB-203ENST00000409458 KPNA2P52292 529 aaKnown RBP13.95□□□□□ -0.18
GPNMB-203ENST00000409458 FAM83EQ2M2I3 478 aa13.95□□□□□ -0.18
GPNMB-203ENST00000409458 GPR33Q49SQ1 333 aa13.95□□□□□ -0.18
GPNMB-203ENST00000409458 ATP13A5Q4VNC0 1218 aa13.95□□□□□ -0.18
GPNMB-203ENST00000409458 AGAP9Q5VTM2 703 aa13.95□□□□□ -0.18
GPNMB-203ENST00000409458 LYPLAL1Q5VWZ2 237 aa13.95□□□□□ -0.18
GPNMB-203ENST00000409458 ZDHHC20Q5W0Z9 365 aa13.95□□□□□ -0.18
GPNMB-203ENST00000409458 CHPFQ8IZ52 775 aa13.95□□□□□ -0.18
GPNMB-203ENST00000409458 RBFAQ8N0V3 343 aa13.95□□□□□ -0.18
GPNMB-203ENST00000409458 GIMAP7Q8NHV1 300 aa13.95□□□□□ -0.18
GPNMB-203ENST00000409458 PPP1R14CQ8TAE6 165 aa13.95□□□□□ -0.18
GPNMB-203ENST00000409458 RDH11Q8TC12 318 aa13.95□□□□□ -0.18
GPNMB-203ENST00000409458 THOC1Q96FV9 657 aaKnown RBP13.95□□□□□ -0.18
GPNMB-203ENST00000409458 PPP1R16AQ96I34 528 aa13.95□□□□□ -0.18
GPNMB-203ENST00000409458 GPR21Q99679 349 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms