RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 IQCF5A8MTL0 148 aa18.11■□□□□ 0.49
COL18A1-204ENST00000400337 PMM2O15305 246 aa18.11■□□□□ 0.49
COL18A1-204ENST00000400337 STK16O75716 305 aa18.11■□□□□ 0.49
COL18A1-204ENST00000400337 FECHP22830 423 aa18.11■□□□□ 0.49
COL18A1-204ENST00000400337 ARHGAP1Q07960 439 aa18.11■□□□□ 0.49
COL18A1-204ENST00000400337 HNRNPDQ14103 355 aaKnown RBP18.11■□□□□ 0.49
COL18A1-204ENST00000400337 LSM12Q3MHD2 195 aaKnown RBP18.11■□□□□ 0.49
COL18A1-204ENST00000400337 IRAK1BP1Q5VVH5 260 aa18.11■□□□□ 0.49
COL18A1-204ENST00000400337 TMPRSS11BQ86T26 416 aa18.11■□□□□ 0.49
COL18A1-204ENST00000400337 SLAIN1Q8ND83 568 aa18.11■□□□□ 0.49
COL18A1-204ENST00000400337 CAPNS2Q96L46 248 aa18.11■□□□□ 0.49
COL18A1-204ENST00000400337 PPM1MQ96MI6 270 aa18.11■□□□□ 0.49
COL18A1-204ENST00000400337 DNAJC11Q9NVH1 559 aa18.11■□□□□ 0.49
COL18A1-204ENST00000400337 AGPSO00116 658 aa18.11■□□□□ 0.49
COL18A1-204ENST00000400337 PLIN3O60664 434 aa18.11■□□□□ 0.49
COL18A1-204ENST00000400337 ATG13O75143 517 aa18.11■□□□□ 0.49
COL18A1-204ENST00000400337 GOT2P00505 430 aaKnown RBP18.11■□□□□ 0.49
COL18A1-204ENST00000400337 WASP42768 502 aa18.11■□□□□ 0.49
COL18A1-204ENST00000400337 RALGDSQ12967 914 aa18.11■□□□□ 0.49
COL18A1-204ENST00000400337 KIAA0408Q6ZU52 694 aa18.11■□□□□ 0.49
COL18A1-204ENST00000400337 PROSER1Q86XN7 944 aa18.11■□□□□ 0.49
COL18A1-204ENST00000400337 SFRP1Q8N474 314 aa18.11■□□□□ 0.49
COL18A1-204ENST00000400337 POLR1BQ9H9Y6 1135 aa18.11■□□□□ 0.49
COL18A1-204ENST00000400337 LRTM1Q9HBL6 345 aa18.11■□□□□ 0.49
COL18A1-204ENST00000400337 CD84Q9UIB8 345 aa18.11■□□□□ 0.49
COL18A1-204ENST00000400337 CPQQ9Y646 472 aa18.11■□□□□ 0.49
COL18A1-204ENST00000400337 OR10H3O60404 316 aa18.11■□□□□ 0.49
COL18A1-204ENST00000400337 TSC22D2O75157 780 aa18.11■□□□□ 0.49
COL18A1-204ENST00000400337 EOMESO95936 686 aa18.11■□□□□ 0.49
COL18A1-204ENST00000400337 SLC6A2P23975 617 aa18.11■□□□□ 0.49
COL18A1-204ENST00000400337 CYP4F2P78329 520 aa18.11■□□□□ 0.49
COL18A1-204ENST00000400337 SAPCD2Q86UD0 394 aa18.11■□□□□ 0.49
COL18A1-204ENST00000400337 NOL11Q9H8H0 719 aaKnown RBP18.11■□□□□ 0.49
COL18A1-204ENST00000400337 CLN6Q9NWW5 311 aa18.11■□□□□ 0.49
COL18A1-204ENST00000400337 TRBC1P01850 177 aa18.11■□□□□ 0.49
COL18A1-204ENST00000400337 CPTPQ5TA50 214 aa18.11■□□□□ 0.49
COL18A1-204ENST00000400337 B3GNT6Q6ZMB0 384 aa18.11■□□□□ 0.49
COL18A1-204ENST00000400337 DENND6AQ8IWF6 608 aa18.11■□□□□ 0.49
COL18A1-204ENST00000400337 IPPKQ9H8X2 491 aa18.11■□□□□ 0.49
COL18A1-204ENST00000400337 DNAJC28Q9NX36 388 aa18.11■□□□□ 0.49
COL18A1-204ENST00000400337 IFT172Q9UG01 1749 aa18.11■□□□□ 0.49
COL18A1-204ENST00000400337 PTPRJQ12913 1337 aa18.11■□□□□ 0.49
COL18A1-204ENST00000400337 SUV39H1O43463 412 aa18.1■□□□□ 0.49
COL18A1-204ENST00000400337 TTKP33981 857 aa18.1■□□□□ 0.49
COL18A1-204ENST00000400337 MTAPQ13126 283 aa18.1■□□□□ 0.49
COL18A1-204ENST00000400337 SLC47A1Q96FL8 570 aa18.1■□□□□ 0.49
COL18A1-204ENST00000400337 AGAP2Q99490 1192 aa18.1■□□□□ 0.49
COL18A1-204ENST00000400337 OSBPL11Q9BXB4 747 aa18.1■□□□□ 0.49
COL18A1-204ENST00000400337 MAGEL2Q9UJ55 1249 aa18.1■□□□□ 0.49
COL18A1-204ENST00000400337 PIGRP01833 764 aa18.1■□□□□ 0.49
COL18A1-204ENST00000400337 BUD31P41223 144 aaPredicted RBP18.1■□□□□ 0.49
COL18A1-204ENST00000400337 ZNF460Q14592 562 aa18.1■□□□□ 0.49
COL18A1-204ENST00000400337 MTX3Q5HYI7 312 aa18.1■□□□□ 0.49
COL18A1-204ENST00000400337 TRMT10BQ6PF06 316 aaKnown RBP18.1■□□□□ 0.49
COL18A1-204ENST00000400337 TDRPQ86YL5 185 aa18.1■□□□□ 0.49
COL18A1-204ENST00000400337 TLCD1Q96CP7 247 aa18.1■□□□□ 0.49
COL18A1-204ENST00000400337 ATG10Q9H0Y0 220 aa18.1■□□□□ 0.49
COL18A1-204ENST00000400337 A8MUI8 341 aa18.1■□□□□ 0.49
COL18A1-204ENST00000400337 CHURC1-FNTBB4DL54 471 aa18.1■□□□□ 0.49
COL18A1-204ENST00000400337 TIPRLO75663 272 aa18.1■□□□□ 0.49
COL18A1-204ENST00000400337 HLA-DQA2P01906 255 aa18.1■□□□□ 0.49
COL18A1-204ENST00000400337 SSR2P43308 183 aa18.1■□□□□ 0.49
COL18A1-204ENST00000400337 MANFP55145 182 aaKnown RBP18.1■□□□□ 0.49
COL18A1-204ENST00000400337 ACAP2Q15057 778 aa18.1■□□□□ 0.49
COL18A1-204ENST00000400337 CHSY3Q70JA7 882 aa18.1■□□□□ 0.49
COL18A1-204ENST00000400337 HDDC2Q7Z4H3 204 aa18.1■□□□□ 0.49
COL18A1-204ENST00000400337 DSELQ8IZU8 1212 aa18.1■□□□□ 0.49
COL18A1-204ENST00000400337 PQLC1Q8N2U9 271 aa18.1■□□□□ 0.49
COL18A1-204ENST00000400337 CCDC28BQ9BUN5 200 aa18.1■□□□□ 0.49
COL18A1-204ENST00000400337 LTN1O94822 1766 aa18.1■□□□□ 0.49
COL18A1-204ENST00000400337 OR2AG2A6NM03 316 aa18.1■□□□□ 0.49
COL18A1-204ENST00000400337 CREB1P16220 341 aa18.1■□□□□ 0.49
COL18A1-204ENST00000400337 HSPA7P48741 367 aa18.1■□□□□ 0.49
COL18A1-204ENST00000400337 SMIM11AP58511 58 aa18.1■□□□□ 0.49
COL18A1-204ENST00000400337 LSM3P62310 102 aaKnown RBP18.1■□□□□ 0.49
COL18A1-204ENST00000400337 JAG1P78504 1218 aa18.1■□□□□ 0.49
COL18A1-204ENST00000400337 IL10RBQ08334 325 aa18.1■□□□□ 0.49
COL18A1-204ENST00000400337 CYP1B1Q16678 543 aa18.1■□□□□ 0.49
COL18A1-204ENST00000400337 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.1■□□□□ 0.49
COL18A1-204ENST00000400337 DEF8Q6ZN54 512 aa18.1■□□□□ 0.49
COL18A1-204ENST00000400337 PARGQ86W56 976 aa18.1■□□□□ 0.49
COL18A1-204ENST00000400337 OR7A2PQ8NGA2 310 aa18.1■□□□□ 0.49
COL18A1-204ENST00000400337 RHOBTB2Q9BYZ6 727 aa18.1■□□□□ 0.49
COL18A1-204ENST00000400337 SLITRK2Q9H156 845 aa18.1■□□□□ 0.49
COL18A1-204ENST00000400337 MINDY3Q9H8M7 445 aa18.1■□□□□ 0.49
COL18A1-204ENST00000400337 CIDEBQ9UHD4 219 aa18.1■□□□□ 0.49
COL18A1-204ENST00000400337 ADGRE2Q9UHX3 823 aa18.1■□□□□ 0.49
COL18A1-204ENST00000400337 SLC38A8A6NNN8 435 aa18.09■□□□□ 0.49
COL18A1-204ENST00000400337 SERPINB7O75635 380 aa18.09■□□□□ 0.49
COL18A1-204ENST00000400337 GNRH1P01148 92 aa18.09■□□□□ 0.49
COL18A1-204ENST00000400337 NELFEP18615 380 aaKnown RBP18.09■□□□□ 0.49
COL18A1-204ENST00000400337 POLR2JP52435 117 aaKnown RBP18.09■□□□□ 0.49
COL18A1-204ENST00000400337 DPYSL2Q16555 572 aa18.09■□□□□ 0.49
COL18A1-204ENST00000400337 SYPL2Q5VXT5 272 aa18.09■□□□□ 0.49
COL18A1-204ENST00000400337 TCAIMQ8N3R3 496 aa18.09■□□□□ 0.49
COL18A1-204ENST00000400337 FBXO22Q8NEZ5 403 aa18.09■□□□□ 0.49
COL18A1-204ENST00000400337 LGR5O75473 907 aa18.09■□□□□ 0.49
COL18A1-204ENST00000400337 FGBP02675 491 aa18.09■□□□□ 0.49
COL18A1-204ENST00000400337 CLCQ05315 142 aa18.09■□□□□ 0.49
COL18A1-204ENST00000400337 VPS26BQ4G0F5 336 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms