RNA–Protein interactions for RNA: ENST00000400301.5

USP48-204, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 4,309 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-204ENST00000400301 PAIP1Q9H074 479 aaKnown RBP18.45■□□□□ 0.54
USP48-204ENST00000400301 ATP13A3Q9H7F0 1226 aa18.45■□□□□ 0.54
USP48-204ENST00000400301 A0A1B0GVM2 712 aa18.44■□□□□ 0.54
USP48-204ENST00000400301 TCAF2A6NFQ2 919 aa18.44■□□□□ 0.54
USP48-204ENST00000400301 CKMT2P17540 419 aa18.44■□□□□ 0.54
USP48-204ENST00000400301 KCNQ1P51787 676 aa18.44■□□□□ 0.54
USP48-204ENST00000400301 PRSS55Q6UWB4 352 aaPredicted RBP18.44■□□□□ 0.54
USP48-204ENST00000400301 TMEM132CQ8N3T6 1108 aa18.44■□□□□ 0.54
USP48-204ENST00000400301 MED8Q96G25 268 aa18.44■□□□□ 0.54
USP48-204ENST00000400301 MRGPRX2Q96LB1 330 aa18.44■□□□□ 0.54
USP48-204ENST00000400301 CYP2S1Q96SQ9 504 aa18.44■□□□□ 0.54
USP48-204ENST00000400301 PKP2Q99959 881 aa18.44■□□□□ 0.54
USP48-204ENST00000400301 NMUR1Q9HB89 426 aa18.44■□□□□ 0.54
USP48-204ENST00000400301 CCDC189A1A4V9 331 aa18.44■□□□□ 0.54
USP48-204ENST00000400301 DNAJB1P25685 340 aa18.44■□□□□ 0.54
USP48-204ENST00000400301 SPDYE7PQ495Y7 208 aa18.44■□□□□ 0.54
USP48-204ENST00000400301 CWF19L1Q69YN2 538 aaKnown RBP18.44■□□□□ 0.54
USP48-204ENST00000400301 SPESP1Q6UW49 350 aa18.44■□□□□ 0.54
USP48-204ENST00000400301 SIDT2Q8NBJ9 832 aaKnown RBP18.44■□□□□ 0.54
USP48-204ENST00000400301 SPATA16Q9BXB7 569 aa18.44■□□□□ 0.54
USP48-204ENST00000400301 FBRSL1Q9HCM7 1045 aaKnown RBP18.44■□□□□ 0.54
USP48-204ENST00000400301 FNIP2Q9P278 1114 aa18.44■□□□□ 0.54
USP48-204ENST00000400301 WNK3Q9BYP7 1800 aa18.44■□□□□ 0.54
USP48-204ENST00000400301 CAPN14A8MX76 684 aa18.44■□□□□ 0.54
USP48-204ENST00000400301 ELMSAN1Q6PJG2 1045 aa18.44■□□□□ 0.54
USP48-204ENST00000400301 ZNF621Q6ZSS3 439 aa18.44■□□□□ 0.54
USP48-204ENST00000400301 DET1Q7L5Y6 550 aa18.44■□□□□ 0.54
USP48-204ENST00000400301 TBC1D21Q8IYX1 336 aa18.44■□□□□ 0.54
USP48-204ENST00000400301 B4GALNT2Q8NHY0 566 aa18.44■□□□□ 0.54
USP48-204ENST00000400301 SH3BP4Q9P0V3 963 aa18.44■□□□□ 0.54
USP48-204ENST00000400301 TBC1D30Q9Y2I9 924 aa18.44■□□□□ 0.54
USP48-204ENST00000400301 FADS3Q9Y5Q0 445 aa18.44■□□□□ 0.54
USP48-204ENST00000400301 G3V2L1 256 aa18.43■□□□□ 0.54
USP48-204ENST00000400301 SNAP91O60641 907 aa18.43■□□□□ 0.54
USP48-204ENST00000400301 AFF1P51825 1210 aaKnown RBP18.43■□□□□ 0.54
USP48-204ENST00000400301 DCTN2Q13561 401 aaKnown RBP18.43■□□□□ 0.54
USP48-204ENST00000400301 ARHGAP15Q53QZ3 475 aa18.43■□□□□ 0.54
USP48-204ENST00000400301 USP45Q70EL2 814 aa18.43■□□□□ 0.54
USP48-204ENST00000400301 IFNL1Q8IU54 200 aa18.43■□□□□ 0.54
USP48-204ENST00000400301 ZMIZ2Q8NF64 920 aa18.43■□□□□ 0.54
USP48-204ENST00000400301 MYO19Q96H55 970 aa18.43■□□□□ 0.54
USP48-204ENST00000400301 TFB2MQ9H5Q4 396 aaKnown RBP18.43■□□□□ 0.54
USP48-204ENST00000400301 ZDHHC6Q9H6R6 413 aa18.43■□□□□ 0.54
USP48-204ENST00000400301 RSL24D1Q9UHA3 163 aaKnown RBP18.43■□□□□ 0.54
USP48-204ENST00000400301 ARFGEF1Q9Y6D6 1849 aa18.43■□□□□ 0.54
USP48-204ENST00000400301 UROSP10746 265 aa18.43■□□□□ 0.54
USP48-204ENST00000400301 CCNIQ14094 377 aa18.43■□□□□ 0.54
USP48-204ENST00000400301 HIST2H2ACQ16777 129 aaPredicted RBP18.43■□□□□ 0.54
USP48-204ENST00000400301 HIST2H2AA3Q6FI13 130 aa18.43■□□□□ 0.54
USP48-204ENST00000400301 TERB1Q8NA31 727 aa18.43■□□□□ 0.54
USP48-204ENST00000400301 TMEM159Q96B96 161 aa18.43■□□□□ 0.54
USP48-204ENST00000400301 ZFYVE1Q9HBF4 777 aa18.43■□□□□ 0.54
USP48-204ENST00000400301 DMTF1Q9Y222 760 aa18.43■□□□□ 0.54
USP48-204ENST00000400301 SDHDO14521 159 aa18.43■□□□□ 0.54
USP48-204ENST00000400301 SELPP16109 830 aa18.43■□□□□ 0.54
USP48-204ENST00000400301 IRF8Q02556 426 aa18.43■□□□□ 0.54
USP48-204ENST00000400301 GLYATQ6IB77 296 aa18.43■□□□□ 0.54
USP48-204ENST00000400301 TMEM26Q6ZUK4 368 aa18.43■□□□□ 0.54
USP48-204ENST00000400301 SORT1Q99523 831 aa18.43■□□□□ 0.54
USP48-204ENST00000400301 IL12RB2Q99665 862 aa18.43■□□□□ 0.54
USP48-204ENST00000400301 ALG2Q9H553 416 aa18.43■□□□□ 0.54
USP48-204ENST00000400301 EVLQ9UI08 416 aaPredicted RBP18.43■□□□□ 0.54
USP48-204ENST00000400301 SLC25A14O95258 325 aaPredicted RBP18.42■□□□□ 0.54
USP48-204ENST00000400301 FESP07332 822 aa18.42■□□□□ 0.54
USP48-204ENST00000400301 HAPLN1P10915 354 aaPredicted RBP18.42■□□□□ 0.54
USP48-204ENST00000400301 MAPK8P45983 427 aa18.42■□□□□ 0.54
USP48-204ENST00000400301 UPF1Q92900 1129 aaKnown RBP eCLIP18.42■□□□□ 0.54
USP48-204ENST00000400301 TMLHEQ9NVH6 421 aa18.42■□□□□ 0.54
USP48-204ENST00000400301 INTS10Q9NVR2 710 aaKnown RBP18.42■□□□□ 0.54
USP48-204ENST00000400301 ADAMTS6Q9UKP5 1117 aa18.42■□□□□ 0.54
USP48-204ENST00000400301 ATP11BQ9Y2G3 1177 aa18.42■□□□□ 0.54
USP48-204ENST00000400301 LOXHD1Q8IVV2 1947 aa18.42■□□□□ 0.54
USP48-204ENST00000400301 EVPLQ92817 2033 aa18.42■□□□□ 0.54
USP48-204ENST00000400301 MYADML2A6NDP7 307 aa18.42■□□□□ 0.54
USP48-204ENST00000400301 NIPSNAP2O75323 286 aa18.42■□□□□ 0.54
USP48-204ENST00000400301 BCL10O95999 233 aa18.42■□□□□ 0.54
USP48-204ENST00000400301 ANXA6P08133 673 aa18.42■□□□□ 0.54
USP48-204ENST00000400301 CNPP09543 421 aaKnown RBP18.42■□□□□ 0.54
USP48-204ENST00000400301 NRG1Q02297 640 aaPredicted RBP18.42■□□□□ 0.54
USP48-204ENST00000400301 LPIN1Q14693 890 aa18.42■□□□□ 0.54
USP48-204ENST00000400301 CNPY1Q3B7I2 92 aa18.42■□□□□ 0.54
USP48-204ENST00000400301 FAM91A1Q658Y4 838 aa18.42■□□□□ 0.54
USP48-204ENST00000400301 ZNF280BQ86YH2 543 aa18.42■□□□□ 0.54
USP48-204ENST00000400301 CANT1Q8WVQ1 401 aa18.42■□□□□ 0.54
USP48-204ENST00000400301 IPPKQ9H8X2 491 aa18.42■□□□□ 0.54
USP48-204ENST00000400301 SLC38A8A6NNN8 435 aa18.42■□□□□ 0.54
USP48-204ENST00000400301 CAPN1P07384 714 aa18.42■□□□□ 0.54
USP48-204ENST00000400301 NCK1P16333 377 aa18.42■□□□□ 0.54
USP48-204ENST00000400301 HSPA7P48741 367 aa18.42■□□□□ 0.54
USP48-204ENST00000400301 SNRPD1P62314 119 aaKnown RBP18.42■□□□□ 0.54
USP48-204ENST00000400301 PPP1R3AQ16821 1122 aa18.42■□□□□ 0.54
USP48-204ENST00000400301 CTC1Q2NKJ3 1217 aa18.42■□□□□ 0.54
USP48-204ENST00000400301 PM20D1Q6GTS8 502 aa18.42■□□□□ 0.54
USP48-204ENST00000400301 SERINC5Q86VE9 423 aa18.42■□□□□ 0.54
USP48-204ENST00000400301 C8orf59Q8N0T1 100 aaPredicted RBP18.42■□□□□ 0.54
USP48-204ENST00000400301 GALNT15Q8N3T1 639 aa18.42■□□□□ 0.54
USP48-204ENST00000400301 CLHC1Q8NHS4 586 aa18.42■□□□□ 0.54
USP48-204ENST00000400301 ABCG8Q9H221 673 aa18.42■□□□□ 0.54
USP48-204ENST00000400301 ZNF831Q5JPB2 1677 aa18.42■□□□□ 0.54
USP48-204ENST00000400301 LINGO3P0C6S8 592 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms