RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 TMEM116Q8NCL8 245 aa5.42□□□□□ -1.54
HMGB3P7-201ENST00000400214 SLC17A8Q8NDX2 589 aa5.42□□□□□ -1.54
HMGB3P7-201ENST00000400214 TMEM161BQ8NDZ6 487 aa5.42□□□□□ -1.54
HMGB3P7-201ENST00000400214 ELOA3Q8NG57 546 aa5.42□□□□□ -1.54
HMGB3P7-201ENST00000400214 MAFAQ8NHW3 353 aaPredicted RBP5.42□□□□□ -1.54
HMGB3P7-201ENST00000400214 GDPD5Q8WTR4 605 aa5.42□□□□□ -1.54
HMGB3P7-201ENST00000400214 POMGNT1Q8WZA1 660 aa5.42□□□□□ -1.54
HMGB3P7-201ENST00000400214 CASP10Q92851 521 aa5.42□□□□□ -1.54
HMGB3P7-201ENST00000400214 DNAJC19Q96DA6 116 aa5.42□□□□□ -1.54
HMGB3P7-201ENST00000400214 DTNBP1Q96EV8 351 aa5.42□□□□□ -1.54
HMGB3P7-201ENST00000400214 CPB2Q96IY4 423 aa5.42□□□□□ -1.54
HMGB3P7-201ENST00000400214 COX4I2Q96KJ9 171 aa5.42□□□□□ -1.54
HMGB3P7-201ENST00000400214 AGAP3Q96P47 875 aa5.42□□□□□ -1.54
HMGB3P7-201ENST00000400214 RUFY1Q96T51 708 aa5.42□□□□□ -1.54
HMGB3P7-201ENST00000400214 PLIN2Q99541 437 aa5.42□□□□□ -1.54
HMGB3P7-201ENST00000400214 TCF25Q9BQ70 676 aa5.42□□□□□ -1.54
HMGB3P7-201ENST00000400214 SRSF8Q9BRL6 282 aaKnown RBP5.42□□□□□ -1.54
HMGB3P7-201ENST00000400214 ERP44Q9BS26 406 aa5.42□□□□□ -1.54
HMGB3P7-201ENST00000400214 MLPHQ9BV36 600 aaPredicted RBP5.42□□□□□ -1.54
HMGB3P7-201ENST00000400214 CCDC106Q9BWC9 280 aa5.42□□□□□ -1.54
HMGB3P7-201ENST00000400214 GPR62Q9BZJ7 368 aa5.42□□□□□ -1.54
HMGB3P7-201ENST00000400214 MTMR12Q9C0I1 747 aa5.42□□□□□ -1.54
HMGB3P7-201ENST00000400214 PDZD7Q9H5P4 517 aa5.42□□□□□ -1.54
HMGB3P7-201ENST00000400214 ACSS3Q9H6R3 686 aa5.42□□□□□ -1.54
HMGB3P7-201ENST00000400214 ATAD3AQ9NVI7 634 aa5.42□□□□□ -1.54
HMGB3P7-201ENST00000400214 ERVK13-1Q9NX77 482 aa5.42□□□□□ -1.54
HMGB3P7-201ENST00000400214 COX16Q9P0S2 106 aa5.42□□□□□ -1.54
HMGB3P7-201ENST00000400214 LARSQ9P2J5 1176 aaKnown RBP5.42□□□□□ -1.54
HMGB3P7-201ENST00000400214 LRIT1Q9P2V4 623 aa5.42□□□□□ -1.54
HMGB3P7-201ENST00000400214 PCDHA7Q9UN72 937 aa5.42□□□□□ -1.54
HMGB3P7-201ENST00000400214 PLAGL2Q9UPG8 496 aa5.42□□□□□ -1.54
HMGB3P7-201ENST00000400214 TNFSF13BQ9Y275 285 aa5.42□□□□□ -1.54
HMGB3P7-201ENST00000400214 ATP6V1DQ9Y5K8 247 aa5.42□□□□□ -1.54
HMGB3P7-201ENST00000400214 NFS1Q9Y697 457 aa5.42□□□□□ -1.54
HMGB3P7-201ENST00000400214 MUC3AQ02505 3323 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 PLXNA3P51805 1871 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 A0A1W2PQM1 296 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 A0A1W2PR48 441 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 TMEM82A0PJX8 343 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 CTAGE15A4D2H0 777 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 GAGE10A6NGK3 116 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 ARL5CA6NH57 179 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 MYMKA6NI61 221 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 LRRC72A6NJI9 287 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 A8MZ25 164 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 KPNA7A9QM74 516 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 KIF2AO00139 706 aaPredicted RBP5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 MYO1CO00159 1063 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 ADAMDEC1O15204 470 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 SLC16A4O15374 487 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 SLCO2B1O94956 709 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 PTBP3O95758 552 aaKnown RBP5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 EFEMP2O95967 443 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 PIGRP01833 764 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 ITGB1P05556 798 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 CTAGE8P0CG41 777 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 SKILP12757 684 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 DNAJB1P25685 340 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 CTNNB1P35222 781 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 GPD2P43304 727 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 KIR3DL1P43629 444 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 PTDSS1P48651 473 aaKnown RBP5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 CAPZA1P52907 286 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 GBX2P52951 348 aaPredicted RBP5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 OLR1P78380 273 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 PRAMEP78395 509 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 NUCB2P80303 420 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 GTF2BQ00403 316 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 CD69Q07108 199 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 DSC1Q08554 894 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 ELP6Q0PNE2 266 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 GPS1Q13098 491 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 CDK5R2Q13319 367 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 SNX1Q13596 522 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 IL11RAQ14626 422 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 ZRSR1Q15695 479 aaKnown RBP5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 DCAF4L1Q3SXM0 396 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 XKR4Q5GH76 650 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 ARTNQ5T4W7 220 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 CYP4A22Q5TCH4 519 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 ATF7IP2Q5U623 682 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 KIAA0930Q6ICG6 404 aaPredicted RBP5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 DENND1BQ6P3S1 775 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 GLB1LQ6UWU2 654 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 ALKAL1Q6UXT8 129 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 RBPMS2Q6ZRY4 209 aaKnown RBP5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 ERN2Q76MJ5 926 aaKnown RBP5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 HAUS6Q7Z4H7 955 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 CTAGE6Q86UF2 777 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 PROSER1Q86XN7 944 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 CTAGE4Q8IX94 777 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 CDH26Q8IXH8 852 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 HACE1Q8IYU2 909 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 ABI1Q8IZP0 508 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 FAM185AQ8N0U4 392 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 DCLK2Q8N568 766 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 POU5F2Q8N7G0 328 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 ZNF366Q8N895 744 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 FSIP1Q8NA03 581 aa5.41□□□□□ -1.54
HMGB3P7-201ENST00000400214 KDM1BQ8NB78 822 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms