RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 CLEC4FQ8N1N0 589 aa13.93□□□□□ -0.18
APOB-202ENST00000399256 OR6P1Q8NGX9 317 aa13.93□□□□□ -0.18
APOB-202ENST00000399256 SLC22A17Q8WUG5 538 aa13.93□□□□□ -0.18
APOB-202ENST00000399256 PTCD2Q8WV60 388 aaKnown RBP13.93□□□□□ -0.18
APOB-202ENST00000399256 SH3YL1Q96HL8 342 aaPredicted RBP13.93□□□□□ -0.18
APOB-202ENST00000399256 TRIM54Q9BYV2 358 aa13.93□□□□□ -0.18
APOB-202ENST00000399256 ENTPD7Q9NQZ7 604 aa13.93□□□□□ -0.18
APOB-202ENST00000399256 PCDHGA11Q9Y5H2 935 aa13.93□□□□□ -0.18
APOB-202ENST00000399256 H0YAE9 185 aa13.93□□□□□ -0.18
APOB-202ENST00000399256 KDM1AO60341 852 aa13.93□□□□□ -0.18
APOB-202ENST00000399256 CCNCP24863 283 aa13.93□□□□□ -0.18
APOB-202ENST00000399256 ARSFP54793 590 aa13.93□□□□□ -0.18
APOB-202ENST00000399256 LILRA4P59901 499 aa13.93□□□□□ -0.18
APOB-202ENST00000399256 SV2CQ496J9 727 aa13.93□□□□□ -0.18
APOB-202ENST00000399256 ARHGAP12Q8IWW6 846 aa13.93□□□□□ -0.18
APOB-202ENST00000399256 OSMRQ99650 979 aa13.93□□□□□ -0.18
APOB-202ENST00000399256 SMOQ99835 787 aa13.93□□□□□ -0.18
APOB-202ENST00000399256 SLX1AQ9BQ83 275 aa13.93□□□□□ -0.18
APOB-202ENST00000399256 BDH2Q9BUT1 245 aa13.93□□□□□ -0.18
APOB-202ENST00000399256 FUNDC2Q9BWH2 189 aa13.93□□□□□ -0.18
APOB-202ENST00000399256 RRAGCQ9HB90 399 aa13.93□□□□□ -0.18
APOB-202ENST00000399256 SLC52A3Q9NQ40 469 aa13.93□□□□□ -0.18
APOB-202ENST00000399256 INTS7Q9NVH2 962 aaKnown RBP13.93□□□□□ -0.18
APOB-202ENST00000399256 ZNF639Q9UID6 485 aa13.93□□□□□ -0.18
APOB-202ENST00000399256 AQP9O43315 295 aa13.92□□□□□ -0.18
APOB-202ENST00000399256 BCAS1O75363 584 aaPredicted RBP13.92□□□□□ -0.18
APOB-202ENST00000399256 E2F6O75461 281 aa13.92□□□□□ -0.18
APOB-202ENST00000399256 HPCAL1P37235 193 aa13.92□□□□□ -0.18
APOB-202ENST00000399256 KCNK10P57789 538 aa13.92□□□□□ -0.18
APOB-202ENST00000399256 OXA1LQ15070 435 aa13.92□□□□□ -0.18
APOB-202ENST00000399256 GRIK4Q16099 956 aa13.92□□□□□ -0.18
APOB-202ENST00000399256 MARCH8Q5T0T0 291 aa13.92□□□□□ -0.18
APOB-202ENST00000399256 CRTC3Q6UUV7 619 aa13.92□□□□□ -0.18
APOB-202ENST00000399256 TAC4Q86UU9 113 aa13.92□□□□□ -0.18
APOB-202ENST00000399256 STK32CQ86UX6 486 aa13.92□□□□□ -0.18
APOB-202ENST00000399256 KIAA2013Q8IYS2 634 aa13.92□□□□□ -0.18
APOB-202ENST00000399256 SPARTQ8N0X7 666 aa13.92□□□□□ -0.18
APOB-202ENST00000399256 PAPD5Q8NDF8 572 aaKnown RBP13.92□□□□□ -0.18
APOB-202ENST00000399256 ZNF347Q96SE7 839 aa13.92□□□□□ -0.18
APOB-202ENST00000399256 SLC39A8Q9C0K1 460 aa13.92□□□□□ -0.18
APOB-202ENST00000399256 NDFIP2Q9NV92 336 aa13.92□□□□□ -0.18
APOB-202ENST00000399256 GMIPQ9P107 970 aa13.92□□□□□ -0.18
APOB-202ENST00000399256 RBMX2Q9Y388 322 aaKnown RBP13.92□□□□□ -0.18
APOB-202ENST00000399256 TIMM22Q9Y584 194 aa13.92□□□□□ -0.18
APOB-202ENST00000399256 GPC6Q9Y625 555 aaPredicted RBP13.92□□□□□ -0.18
APOB-202ENST00000399256 CLDN25C9JDP6 229 aa13.92□□□□□ -0.18
APOB-202ENST00000399256 AXIN1O15169 862 aa13.92□□□□□ -0.18
APOB-202ENST00000399256 MAFKO60675 156 aa13.92□□□□□ -0.18
APOB-202ENST00000399256 MATN4O95460 622 aa13.92□□□□□ -0.18
APOB-202ENST00000399256 WARSP23381 471 aaKnown RBP13.92□□□□□ -0.18
APOB-202ENST00000399256 CRHBPP24387 322 aa13.92□□□□□ -0.18
APOB-202ENST00000399256 CXCR3P49682 368 aa13.92□□□□□ -0.18
APOB-202ENST00000399256 TPD52P55327 224 aaPredicted RBP13.92□□□□□ -0.18
APOB-202ENST00000399256 OR4D2P58180 307 aa13.92□□□□□ -0.18
APOB-202ENST00000399256 TUBA3CQ13748 450 aa13.92□□□□□ -0.18
APOB-202ENST00000399256 KANK2Q63ZY3 851 aa13.92□□□□□ -0.18
APOB-202ENST00000399256 SCIMPQ6UWF3 145 aa13.92□□□□□ -0.18
APOB-202ENST00000399256 RALGPS2Q86X27 583 aaPredicted RBP13.92□□□□□ -0.18
APOB-202ENST00000399256 PTRH1Q86Y79 214 aaKnown RBP13.92□□□□□ -0.18
APOB-202ENST00000399256 TMBIM1Q969X1 311 aa13.92□□□□□ -0.18
APOB-202ENST00000399256 IL12RB2Q99665 862 aa13.92□□□□□ -0.18
APOB-202ENST00000399256 NTN4Q9HB63 628 aa13.92□□□□□ -0.18
APOB-202ENST00000399256 PCDH12Q9NPG4 1184 aa13.92□□□□□ -0.18
APOB-202ENST00000399256 CRTAC1Q9NQ79 661 aa13.92□□□□□ -0.18
APOB-202ENST00000399256 MARCH4Q9P2E8 410 aaPredicted RBP13.92□□□□□ -0.18
APOB-202ENST00000399256 A0A1W2PP18 115 aa13.91□□□□□ -0.18
APOB-202ENST00000399256 THRBP10828 461 aa13.91□□□□□ -0.18
APOB-202ENST00000399256 WNT3AP56704 352 aa13.91□□□□□ -0.18
APOB-202ENST00000399256 OCA2Q04671 838 aa13.91□□□□□ -0.18
APOB-202ENST00000399256 FOXM1Q08050 763 aa13.91□□□□□ -0.18
APOB-202ENST00000399256 ZNF846Q147U1 533 aa13.91□□□□□ -0.18
APOB-202ENST00000399256 FSCN1Q16658 493 aaKnown RBP13.91□□□□□ -0.18
APOB-202ENST00000399256 TIGD2Q4W5G0 525 aa13.91□□□□□ -0.18
APOB-202ENST00000399256 NOTUMQ6P988 496 aa13.91□□□□□ -0.18
APOB-202ENST00000399256 RANBP10Q6VN20 620 aa13.91□□□□□ -0.18
APOB-202ENST00000399256 CILP2Q8IUL8 1156 aa13.91□□□□□ -0.18
APOB-202ENST00000399256 CADM3Q8N126 398 aa13.91□□□□□ -0.18
APOB-202ENST00000399256 ZMIZ2Q8NF64 920 aa13.91□□□□□ -0.18
APOB-202ENST00000399256 CALML6Q8TD86 181 aa13.91□□□□□ -0.18
APOB-202ENST00000399256 HPS1Q92902 700 aa13.91□□□□□ -0.18
APOB-202ENST00000399256 PRKD2Q9BZL6 878 aa13.91□□□□□ -0.18
APOB-202ENST00000399256 POLR3BQ9NW08 1133 aaPredicted RBP13.91□□□□□ -0.18
APOB-202ENST00000399256 KIAA1522Q9P206 1035 aaPredicted RBP13.91□□□□□ -0.18
APOB-202ENST00000399256 EVLQ9UI08 416 aaPredicted RBP13.91□□□□□ -0.18
APOB-202ENST00000399256 UMPSP11172 480 aa13.91□□□□□ -0.18
APOB-202ENST00000399256 HTR1BP28222 390 aa13.91□□□□□ -0.18
APOB-202ENST00000399256 PNPLA4P41247 253 aa13.91□□□□□ -0.18
APOB-202ENST00000399256 UFM1P61960 85 aa13.91□□□□□ -0.18
APOB-202ENST00000399256 SLC14A2Q15849 920 aa13.91□□□□□ -0.18
APOB-202ENST00000399256 MEP1AQ16819 746 aa13.91□□□□□ -0.18
APOB-202ENST00000399256 PM20D1Q6GTS8 502 aa13.91□□□□□ -0.18
APOB-202ENST00000399256 THAP5Q7Z6K1 395 aa13.91□□□□□ -0.18
APOB-202ENST00000399256 CASP10Q92851 521 aa13.91□□□□□ -0.18
APOB-202ENST00000399256 PABPC5Q96DU9 382 aaKnown RBP13.91□□□□□ -0.18
APOB-202ENST00000399256 OTUD5Q96G74 571 aa13.91□□□□□ -0.18
APOB-202ENST00000399256 CCDC138Q96M89 665 aa13.91□□□□□ -0.18
APOB-202ENST00000399256 HERC2P3Q9BVR0 1158 aa13.91□□□□□ -0.18
APOB-202ENST00000399256 MROQ9BYG7 248 aa13.91□□□□□ -0.18
APOB-202ENST00000399256 RGS18Q9NS28 235 aa13.91□□□□□ -0.18
APOB-202ENST00000399256 TIMM13Q9Y5L4 95 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms