RNA–Protein interactions for RNA: ENST00000397417.6

IFT140-202, Transcript of intraflagellar transport 140, humanhuman

TSL 5

Gene IFT140, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-202ENST00000397417 CDKN2AIPNLQ96HQ2 116 aa11.12□□□□□ -0.63
IFT140-202ENST00000397417 HTATIP2Q9BUP3 242 aa11.12□□□□□ -0.63
IFT140-202ENST00000397417 KLHL25Q9H0H3 589 aa11.12□□□□□ -0.63
IFT140-202ENST00000397417 BATF3Q9NR55 127 aa11.12□□□□□ -0.63
IFT140-202ENST00000397417 KCNK4Q9NYG8 393 aa11.12□□□□□ -0.63
IFT140-202ENST00000397417 COQ6Q9Y2Z9 468 aa11.12□□□□□ -0.63
IFT140-202ENST00000397417 ISM1B1AKI9 464 aa11.11□□□□□ -0.63
IFT140-202ENST00000397417 AZIN1O14977 448 aa11.11□□□□□ -0.63
IFT140-202ENST00000397417 ZNF189O75820 626 aaPredicted RBP11.11□□□□□ -0.63
IFT140-202ENST00000397417 COX4I1P13073 169 aa11.11□□□□□ -0.63
IFT140-202ENST00000397417 VHLP40337 213 aa11.11□□□□□ -0.63
IFT140-202ENST00000397417 GSCP56915 257 aaPredicted RBP11.11□□□□□ -0.63
IFT140-202ENST00000397417 ATAT1Q5SQI0 421 aa11.11□□□□□ -0.63
IFT140-202ENST00000397417 STK32CQ86UX6 486 aa11.11□□□□□ -0.63
IFT140-202ENST00000397417 DACH2Q96NX9 599 aa11.11□□□□□ -0.63
IFT140-202ENST00000397417 MTERF1Q99551 399 aaKnown RBP11.11□□□□□ -0.63
IFT140-202ENST00000397417 TSC22D3Q99576 134 aa11.11□□□□□ -0.63
IFT140-202ENST00000397417 MAGEH1Q9H213 219 aa11.11□□□□□ -0.63
IFT140-202ENST00000397417 DCLRE1BQ9H816 532 aa11.11□□□□□ -0.63
IFT140-202ENST00000397417 RAD18Q9NS91 495 aa11.11□□□□□ -0.63
IFT140-202ENST00000397417 OSER1Q9NX31 292 aa11.11□□□□□ -0.63
IFT140-202ENST00000397417 POLR3HQ9Y535 204 aaPredicted RBP11.11□□□□□ -0.63
IFT140-202ENST00000397417 MICAL3Q7RTP6 2002 aa11.11□□□□□ -0.63
IFT140-202ENST00000397417 FAM149AA5PLN7 773 aa11.11□□□□□ -0.63
IFT140-202ENST00000397417 LRRC14BA6NHZ5 514 aa11.11□□□□□ -0.63
IFT140-202ENST00000397417 UPK3BL1B0FP48 263 aa11.11□□□□□ -0.63
IFT140-202ENST00000397417 UPK3BL2E5RIL1 263 aa11.11□□□□□ -0.63
IFT140-202ENST00000397417 CDC7O00311 574 aa11.11□□□□□ -0.63
IFT140-202ENST00000397417 CDK7P50613 346 aa11.11□□□□□ -0.63
IFT140-202ENST00000397417 ZNF135P52742 658 aaPredicted RBP11.11□□□□□ -0.63
IFT140-202ENST00000397417 PPIGQ13427 754 aaKnown RBP eCLIP11.11□□□□□ -0.639e-7■■■□□ 17.2
IFT140-202ENST00000397417 TMPRSS11BQ86T26 416 aa11.11□□□□□ -0.63
IFT140-202ENST00000397417 SETD3Q86TU7 594 aaPredicted RBP11.11□□□□□ -0.63
IFT140-202ENST00000397417 OR9I1Q8NGQ6 314 aa11.11□□□□□ -0.63
IFT140-202ENST00000397417 WDR48Q8TAF3 677 aa11.11□□□□□ -0.63
IFT140-202ENST00000397417 HAPLN3Q96S86 360 aa11.11□□□□□ -0.63
IFT140-202ENST00000397417 KCTD14Q9BQ13 255 aaPredicted RBP11.11□□□□□ -0.63
IFT140-202ENST00000397417 LINC00597Q9H2U6 94 aa11.11□□□□□ -0.63
IFT140-202ENST00000397417 STX16-NPEPL1H3BU86 382 aa11.11□□□□□ -0.63
IFT140-202ENST00000397417 ZNF623O75123 536 aa11.11□□□□□ -0.63
IFT140-202ENST00000397417 IPO13O94829 963 aaKnown RBP11.11□□□□□ -0.63
IFT140-202ENST00000397417 CYP2A6P11509 494 aaPredicted RBP11.11□□□□□ -0.63
IFT140-202ENST00000397417 LBPP18428 481 aa11.11□□□□□ -0.63
IFT140-202ENST00000397417 PSMA4P25789 261 aaKnown RBP11.11□□□□□ -0.63
IFT140-202ENST00000397417 HMGCS1Q01581 520 aa11.11□□□□□ -0.63
IFT140-202ENST00000397417 TCEAL1Q15170 157 aa11.11□□□□□ -0.63
IFT140-202ENST00000397417 RNF43Q68DV7 783 aa11.11□□□□□ -0.63
IFT140-202ENST00000397417 DRICH1Q6PGQ1 229 aaPredicted RBP11.11□□□□□ -0.63
IFT140-202ENST00000397417 GPRIN3Q6ZVF9 776 aa11.11□□□□□ -0.63
IFT140-202ENST00000397417 HORMAD1Q86X24 394 aa11.11□□□□□ -0.63
IFT140-202ENST00000397417 KCTD13Q8WZ19 329 aa11.11□□□□□ -0.63
IFT140-202ENST00000397417 EBPLQ9BY08 206 aa11.11□□□□□ -0.63
IFT140-202ENST00000397417 SMOC2Q9H3U7 446 aa11.11□□□□□ -0.63
IFT140-202ENST00000397417 FAM83DQ9H4H8 585 aa11.11□□□□□ -0.63
IFT140-202ENST00000397417 TLR9Q9NR96 1032 aa11.11□□□□□ -0.63
IFT140-202ENST00000397417 ACTL7BQ9Y614 415 aa11.11□□□□□ -0.63
IFT140-202ENST00000397417 H3BMM5 538 aa11.1□□□□□ -0.63
IFT140-202ENST00000397417 SLC9A3R1O14745 358 aaPredicted RBP11.1□□□□□ -0.63
IFT140-202ENST00000397417 GSTM1P09488 218 aa11.1□□□□□ -0.63
IFT140-202ENST00000397417 TYRP14679 529 aa11.1□□□□□ -0.63
IFT140-202ENST00000397417 ME2P23368 584 aa11.1□□□□□ -0.63
IFT140-202ENST00000397417 GDI1P31150 447 aa11.1□□□□□ -0.63
IFT140-202ENST00000397417 CDH5P33151 784 aaPredicted RBP11.1□□□□□ -0.63
IFT140-202ENST00000397417 ARSDP51689 593 aa11.1□□□□□ -0.63
IFT140-202ENST00000397417 CCNHP51946 323 aaPredicted RBP11.1□□□□□ -0.63
IFT140-202ENST00000397417 IRX1P78414 480 aaPredicted RBP11.1□□□□□ -0.63
IFT140-202ENST00000397417 ALDH6A1Q02252 535 aaKnown RBP11.1□□□□□ -0.63
IFT140-202ENST00000397417 CHRNB3Q05901 458 aa11.1□□□□□ -0.63
IFT140-202ENST00000397417 IL10RBQ08334 325 aa11.1□□□□□ -0.63
IFT140-202ENST00000397417 RIPK1Q13546 671 aa11.1□□□□□ -0.63
IFT140-202ENST00000397417 CNKSR3Q6P9H4 555 aa11.1□□□□□ -0.63
IFT140-202ENST00000397417 Q6ZVL8 140 aa11.1□□□□□ -0.63
IFT140-202ENST00000397417 BEND7Q8N7W2 519 aaPredicted RBP11.1□□□□□ -0.63
IFT140-202ENST00000397417 SLCO2A1Q92959 643 aa11.1□□□□□ -0.63
IFT140-202ENST00000397417 VPS33AQ96AX1 596 aa11.1□□□□□ -0.63
IFT140-202ENST00000397417 KCNA7Q96RP8 456 aa11.1□□□□□ -0.63
IFT140-202ENST00000397417 PRPF18Q99633 342 aaKnown RBP11.1□□□□□ -0.63
IFT140-202ENST00000397417 CCDC3Q9BQI4 270 aa11.1□□□□□ -0.63
IFT140-202ENST00000397417 OXCT2Q9BYC2 517 aaPredicted RBP11.1□□□□□ -0.63
IFT140-202ENST00000397417 EXOSC4Q9NPD3 245 aaKnown RBP11.1□□□□□ -0.63
IFT140-202ENST00000397417 TDP1Q9NUW8 608 aa11.1□□□□□ -0.63
IFT140-202ENST00000397417 GALPQ9UBC7 116 aa11.1□□□□□ -0.63
IFT140-202ENST00000397417 RAP2CQ9Y3L5 183 aa11.1□□□□□ -0.63
IFT140-202ENST00000397417 RFXAPO00287 272 aa11.1□□□□□ -0.63
IFT140-202ENST00000397417 TRIM24O15164 1050 aa11.1□□□□□ -0.63
IFT140-202ENST00000397417 CA3P07451 260 aa11.1□□□□□ -0.63
IFT140-202ENST00000397417 CTSEP14091 401 aa11.1□□□□□ -0.63
IFT140-202ENST00000397417 VCLP18206 1134 aa11.1□□□□□ -0.63
IFT140-202ENST00000397417 IVDP26440 423 aa11.1□□□□□ -0.63
IFT140-202ENST00000397417 PIK3R1P27986 724 aa11.1□□□□□ -0.63
IFT140-202ENST00000397417 CRHR1P34998 444 aa11.1□□□□□ -0.63
IFT140-202ENST00000397417 PGFP49763 221 aa11.1□□□□□ -0.63
IFT140-202ENST00000397417 PAQR9Q6ZVX9 377 aa11.1□□□□□ -0.63
IFT140-202ENST00000397417 SCD5Q86SK9 330 aa11.1□□□□□ -0.63
IFT140-202ENST00000397417 NKAPQ8N5F7 415 aaKnown RBP11.1□□□□□ -0.63
IFT140-202ENST00000397417 CNTD1Q8N815 330 aa11.1□□□□□ -0.63
IFT140-202ENST00000397417 KLHDC9Q8NEP7 349 aa11.1□□□□□ -0.63
IFT140-202ENST00000397417 NTAN1Q96AB6 310 aa11.1□□□□□ -0.63
IFT140-202ENST00000397417 ARMC7Q9H6L4 198 aa11.1□□□□□ -0.63
IFT140-202ENST00000397417 IPPKQ9H8X2 491 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms