RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 DCP1BQ8IZD4 617 aaKnown RBP13.87□□□□□ -0.19
NUP98-204ENST00000397004 MIER2Q8N344 545 aa13.87□□□□□ -0.19
NUP98-204ENST00000397004 OR13C4Q8NGS5 318 aa13.87□□□□□ -0.19
NUP98-204ENST00000397004 ARRDC2Q8TBH0 407 aa13.87□□□□□ -0.19
NUP98-204ENST00000397004 HMCESQ96FZ2 354 aa13.87□□□□□ -0.19
NUP98-204ENST00000397004 MATN4O95460 622 aa13.87□□□□□ -0.19
NUP98-204ENST00000397004 STAMBPO95630 424 aa13.87□□□□□ -0.19
NUP98-204ENST00000397004 ZNF37AP17032 561 aaPredicted RBP13.87□□□□□ -0.19
NUP98-204ENST00000397004 CAPGP40121 348 aa13.87□□□□□ -0.19
NUP98-204ENST00000397004 NFATC3Q12968 1075 aa13.87□□□□□ -0.19
NUP98-204ENST00000397004 SNX19Q92543 992 aa13.87□□□□□ -0.19
NUP98-204ENST00000397004 ISG20Q96AZ6 181 aaKnown RBP13.87□□□□□ -0.19
NUP98-204ENST00000397004 TUBGCP3Q96CW5 907 aa13.87□□□□□ -0.19
NUP98-204ENST00000397004 SEMA4BQ9NPR2 832 aaPredicted RBP13.87□□□□□ -0.19
NUP98-204ENST00000397004 IFT80Q9P2H3 777 aaPredicted RBP13.87□□□□□ -0.19
NUP98-204ENST00000397004 TMEM221A6NGB7 291 aa13.86□□□□□ -0.19
NUP98-204ENST00000397004 XPOTO43592 962 aaKnown RBP13.86□□□□□ -0.19
NUP98-204ENST00000397004 CLASP2O75122 1294 aaKnown RBP13.86□□□□□ -0.19
NUP98-204ENST00000397004 C1RP00736 705 aa13.86□□□□□ -0.19
NUP98-204ENST00000397004 HSPA8P11142 646 aaKnown RBP13.86□□□□□ -0.19
NUP98-204ENST00000397004 PSMA4P25789 261 aaKnown RBP13.86□□□□□ -0.19
NUP98-204ENST00000397004 RPS9P46781 194 aaKnown RBP13.86□□□□□ -0.19
NUP98-204ENST00000397004 GNA12Q03113 381 aa13.86□□□□□ -0.19
NUP98-204ENST00000397004 CBX3Q13185 183 aa13.86□□□□□ -0.19
NUP98-204ENST00000397004 RCAN2Q14206 197 aa13.86□□□□□ -0.19
NUP98-204ENST00000397004 DPY19L1Q2PZI1 675 aa13.86□□□□□ -0.19
NUP98-204ENST00000397004 RIMKLAQ8IXN7 391 aa13.86□□□□□ -0.19
NUP98-204ENST00000397004 PCYOX1LQ8NBM8 494 aa13.86□□□□□ -0.19
NUP98-204ENST00000397004 GPRC5AQ8NFJ5 357 aa13.86□□□□□ -0.19
NUP98-204ENST00000397004 BIRC7Q96CA5 298 aa13.86□□□□□ -0.19
NUP98-204ENST00000397004 NEURL2Q9BR09 285 aa13.86□□□□□ -0.19
NUP98-204ENST00000397004 RGS18Q9NS28 235 aa13.86□□□□□ -0.19
NUP98-204ENST00000397004 SMPD3Q9NY59 655 aaPredicted RBP13.86□□□□□ -0.19
NUP98-204ENST00000397004 PCDHGA11Q9Y5H2 935 aa13.86□□□□□ -0.19
NUP98-204ENST00000397004 RRN3P2A6NIE6 340 aa13.86□□□□□ -0.19
NUP98-204ENST00000397004 CPNE6O95741 557 aa13.86□□□□□ -0.19
NUP98-204ENST00000397004 PAMP19021 973 aa13.86□□□□□ -0.19
NUP98-204ENST00000397004 RELAQ04206 551 aa13.86□□□□□ -0.19
NUP98-204ENST00000397004 NKG7Q16617 165 aa13.86□□□□□ -0.19
NUP98-204ENST00000397004 ZNF829Q3KNS6 432 aaPredicted RBP13.86□□□□□ -0.19
NUP98-204ENST00000397004 HS3ST5Q8IZT8 346 aa13.86□□□□□ -0.19
NUP98-204ENST00000397004 PSMG2Q969U7 264 aa13.86□□□□□ -0.19
NUP98-204ENST00000397004 TADA1Q96BN2 335 aa13.86□□□□□ -0.19
NUP98-204ENST00000397004 ERLEC1Q96DZ1 483 aa13.86□□□□□ -0.19
NUP98-204ENST00000397004 TRMOQ9BU70 441 aa13.86□□□□□ -0.19
NUP98-204ENST00000397004 SLC25A51Q9H1U9 297 aa13.86□□□□□ -0.19
NUP98-204ENST00000397004 NANOGQ9H9S0 305 aa13.86□□□□□ -0.19
NUP98-204ENST00000397004 CPA4Q9UI42 421 aa13.86□□□□□ -0.19
NUP98-204ENST00000397004 FUOMA2VDF0 154 aa13.86□□□□□ -0.19
NUP98-204ENST00000397004 BBIP1A8MTZ0 92 aa13.86□□□□□ -0.19
NUP98-204ENST00000397004 GIPC1O14908 333 aa13.86□□□□□ -0.19
NUP98-204ENST00000397004 SERPINB7O75635 380 aa13.86□□□□□ -0.19
NUP98-204ENST00000397004 BAIAP3O94812 1187 aa13.86□□□□□ -0.19
NUP98-204ENST00000397004 GOT2P00505 430 aaKnown RBP13.86□□□□□ -0.19
NUP98-204ENST00000397004 NR4A1P22736 598 aa13.86□□□□□ -0.19
NUP98-204ENST00000397004 AQP6Q13520 282 aa13.86□□□□□ -0.19
NUP98-204ENST00000397004 GTF2IRD2BQ6EKJ0 949 aa13.86□□□□□ -0.19
NUP98-204ENST00000397004 GTF2IRD2Q86UP8 949 aa13.86□□□□□ -0.19
NUP98-204ENST00000397004 RALGPS2Q86X27 583 aaPredicted RBP13.86□□□□□ -0.19
NUP98-204ENST00000397004 CROCCP3Q8IVE0 287 aa13.86□□□□□ -0.19
NUP98-204ENST00000397004 RTL3Q8N8U3 475 aaKnown RBP13.86□□□□□ -0.19
NUP98-204ENST00000397004 SLC22A17Q8WUG5 538 aa13.86□□□□□ -0.19
NUP98-204ENST00000397004 C1orf50Q9BV19 199 aa13.86□□□□□ -0.19
NUP98-204ENST00000397004 MFSD1Q9H3U5 465 aa13.86□□□□□ -0.19
NUP98-204ENST00000397004 TBCCD1Q9NVR7 557 aa13.86□□□□□ -0.19
NUP98-204ENST00000397004 FBXO10Q9UK96 956 aa13.86□□□□□ -0.19
NUP98-204ENST00000397004 PCDHGA4Q9Y5G9 962 aa13.86□□□□□ -0.19
NUP98-204ENST00000397004 TNFRSF10BO14763 440 aa13.85□□□□□ -0.19
NUP98-204ENST00000397004 ANGPT2O15123 496 aa13.85□□□□□ -0.19
NUP98-204ENST00000397004 RXRGP48443 463 aa13.85□□□□□ -0.19
NUP98-204ENST00000397004 SCNN1GP51170 649 aa13.85□□□□□ -0.19
NUP98-204ENST00000397004 BEX3Q00994 111 aa13.85□□□□□ -0.19
NUP98-204ENST00000397004 OTUD3Q5T2D3 398 aaPredicted RBP13.85□□□□□ -0.19
NUP98-204ENST00000397004 ABRAXAS1Q6UWZ7 409 aa13.85□□□□□ -0.19
NUP98-204ENST00000397004 CENPSQ8N2Z9 138 aa13.85□□□□□ -0.19
NUP98-204ENST00000397004 MTG1Q9BT17 334 aaPredicted RBP13.85□□□□□ -0.19
NUP98-204ENST00000397004 C9orf16Q9BUW7 83 aa13.85□□□□□ -0.19
NUP98-204ENST00000397004 PRKD2Q9BZL6 878 aa13.85□□□□□ -0.19
NUP98-204ENST00000397004 LHPPQ9H008 270 aa13.85□□□□□ -0.19
NUP98-204ENST00000397004 ZFYVE28Q9HCC9 887 aa13.85□□□□□ -0.19
NUP98-204ENST00000397004 CDH9Q9ULB4 789 aa13.85□□□□□ -0.19
NUP98-204ENST00000397004 PTCH2Q9Y6C5 1203 aa13.85□□□□□ -0.19
NUP98-204ENST00000397004 A0A1W2PP18 115 aa13.85□□□□□ -0.19
NUP98-204ENST00000397004 CCR1P32246 355 aa13.85□□□□□ -0.19
NUP98-204ENST00000397004 CDKN1CP49918 316 aaPredicted RBP13.85□□□□□ -0.19
NUP98-204ENST00000397004 KCNC4Q03721 635 aa13.85□□□□□ -0.19
NUP98-204ENST00000397004 UPP1Q16831 310 aa13.85□□□□□ -0.19
NUP98-204ENST00000397004 AGMOQ6ZNB7 445 aa13.85□□□□□ -0.19
NUP98-204ENST00000397004 BPIFB1Q8TDL5 484 aa13.85□□□□□ -0.19
NUP98-204ENST00000397004 ACTL8Q9H568 366 aa13.85□□□□□ -0.19
NUP98-204ENST00000397004 BLOC1S6Q9UL45 172 aa13.85□□□□□ -0.19
NUP98-204ENST00000397004 SH3GLB1Q9Y371 365 aa13.85□□□□□ -0.19
NUP98-204ENST00000397004 RSL1D1O76021 490 aaKnown RBP13.85□□□□□ -0.19
NUP98-204ENST00000397004 LHX1P48742 406 aa13.85□□□□□ -0.19
NUP98-204ENST00000397004 STX1BP61266 288 aa13.85□□□□□ -0.19
NUP98-204ENST00000397004 CBX2Q14781 532 aaPredicted RBP13.85□□□□□ -0.19
NUP98-204ENST00000397004 TMTC4Q5T4D3 741 aa13.85□□□□□ -0.19
NUP98-204ENST00000397004 SDHAF4Q5VUM1 108 aa13.85□□□□□ -0.19
NUP98-204ENST00000397004 SYVN1Q86TM6 617 aa13.85□□□□□ -0.19
NUP98-204ENST00000397004 SNX29P2Q8IUI4 249 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms