RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 R3HCC1LQ7Z5L2 792 aaKnown RBP23.9■■□□□ 1.42
CSNK1E-203ENST00000396832 ITIH5Q86UX2 942 aa23.9■■□□□ 1.42
CSNK1E-203ENST00000396832 TBC1D21Q8IYX1 336 aa23.9■■□□□ 1.42
CSNK1E-203ENST00000396832 SCAMP5Q8TAC9 235 aa23.9■■□□□ 1.42
CSNK1E-203ENST00000396832 FKBP10Q96AY3 582 aa23.9■■□□□ 1.42
CSNK1E-203ENST00000396832 CCDC126Q96EE4 140 aa23.9■■□□□ 1.42
CSNK1E-203ENST00000396832 C19orf60Q96EN9 201 aa23.9■■□□□ 1.42
CSNK1E-203ENST00000396832 SEPHS2Q99611 448 aa23.9■■□□□ 1.42
CSNK1E-203ENST00000396832 CGREF1Q99674 301 aa23.9■■□□□ 1.42
CSNK1E-203ENST00000396832 PAAF1Q9BRP4 392 aa23.9■■□□□ 1.42
CSNK1E-203ENST00000396832 WDR12Q9GZL7 423 aaKnown RBP23.9■■□□□ 1.42
CSNK1E-203ENST00000396832 GSTO2Q9H4Y5 243 aa23.9■■□□□ 1.42
CSNK1E-203ENST00000396832 DNMT3BQ9UBC3 853 aaKnown RBP23.9■■□□□ 1.42
CSNK1E-203ENST00000396832 ANAPC2Q9UJX6 822 aa23.9■■□□□ 1.42
CSNK1E-203ENST00000396832 POU2F3Q9UKI9 436 aa23.9■■□□□ 1.42
CSNK1E-203ENST00000396832 USP22Q9UPT9 525 aa23.9■■□□□ 1.42
CSNK1E-203ENST00000396832 TOR1BO14657 336 aa23.89■■□□□ 1.42
CSNK1E-203ENST00000396832 MYO1DO94832 1006 aa23.89■■□□□ 1.42
CSNK1E-203ENST00000396832 BDNFP23560 247 aa23.89■■□□□ 1.42
CSNK1E-203ENST00000396832 LEPRP48357 1165 aaKnown RBP23.89■■□□□ 1.42
CSNK1E-203ENST00000396832 CDKN2DP55273 166 aa23.89■■□□□ 1.42
CSNK1E-203ENST00000396832 CNTN4Q8IWV2 1026 aa23.89■■□□□ 1.42
CSNK1E-203ENST00000396832 SPARTQ8N0X7 666 aa23.89■■□□□ 1.42
CSNK1E-203ENST00000396832 PARP8Q8N3A8 854 aa23.89■■□□□ 1.42
CSNK1E-203ENST00000396832 SMG8Q8ND04 991 aaKnown RBP23.89■■□□□ 1.42
CSNK1E-203ENST00000396832 SENP8Q96LD8 212 aa23.89■■□□□ 1.42
CSNK1E-203ENST00000396832 GMIPQ9P107 970 aa23.89■■□□□ 1.42
CSNK1E-203ENST00000396832 RALGAPA2Q2PPJ7 1873 aa23.89■■□□□ 1.42
CSNK1E-203ENST00000396832 TCRBV5S2A0A599 114 aa23.89■■□□□ 1.41
CSNK1E-203ENST00000396832 GSTM2P28161 218 aa23.89■■□□□ 1.41
CSNK1E-203ENST00000396832 ECT2LQ008S8 904 aa23.89■■□□□ 1.41
CSNK1E-203ENST00000396832 SNX17Q15036 470 aa23.89■■□□□ 1.41
CSNK1E-203ENST00000396832 IQSEC1Q6DN90 963 aa23.89■■□□□ 1.41
CSNK1E-203ENST00000396832 NAT16Q8N8M0 369 aa23.89■■□□□ 1.41
CSNK1E-203ENST00000396832 DNAJB14Q8TBM8 379 aa23.89■■□□□ 1.41
CSNK1E-203ENST00000396832 KCTD13Q8WZ19 329 aa23.89■■□□□ 1.41
CSNK1E-203ENST00000396832 TBRG4Q969Z0 631 aaKnown RBP eCLIP23.89■■□□□ 1.412e-7■■■■■ 62.8
CSNK1E-203ENST00000396832 MAGED4Q96JG8 741 aa23.89■■□□□ 1.41
CSNK1E-203ENST00000396832 VAT1Q99536 393 aa23.89■■□□□ 1.41
CSNK1E-203ENST00000396832 AKIP1Q9NQ31 210 aa23.89■■□□□ 1.41
CSNK1E-203ENST00000396832 KCTD3Q9Y597 815 aa23.89■■□□□ 1.41
CSNK1E-203ENST00000396832 PTGESO14684 152 aa23.88■■□□□ 1.41
CSNK1E-203ENST00000396832 LTA4HP09960 611 aaKnown RBP23.88■■□□□ 1.41
CSNK1E-203ENST00000396832 TGM1P22735 817 aa23.88■■□□□ 1.41
CSNK1E-203ENST00000396832 WARSP23381 471 aaKnown RBP23.88■■□□□ 1.41
CSNK1E-203ENST00000396832 PNPLA4P41247 253 aa23.88■■□□□ 1.41
CSNK1E-203ENST00000396832 PGFP49763 221 aa23.88■■□□□ 1.41
CSNK1E-203ENST00000396832 TRIM32Q13049 653 aa23.88■■□□□ 1.41
CSNK1E-203ENST00000396832 POLD3Q15054 466 aaPredicted RBP23.88■■□□□ 1.41
CSNK1E-203ENST00000396832 INAVAQ3KP66 663 aa23.88■■□□□ 1.41
CSNK1E-203ENST00000396832 AGAP9Q5VTM2 703 aa23.88■■□□□ 1.41
CSNK1E-203ENST00000396832 ANKRD13BQ86YJ7 626 aa23.88■■□□□ 1.41
CSNK1E-203ENST00000396832 ARHGAP12Q8IWW6 846 aa23.88■■□□□ 1.41
CSNK1E-203ENST00000396832 DPF3Q92784 378 aa23.88■■□□□ 1.41
CSNK1E-203ENST00000396832 MRGPRX2Q96LB1 330 aa23.88■■□□□ 1.41
CSNK1E-203ENST00000396832 KLHL5Q96PQ7 755 aa23.88■■□□□ 1.41
CSNK1E-203ENST00000396832 SLC9A7Q96T83 725 aa23.88■■□□□ 1.41
CSNK1E-203ENST00000396832 SLC30A3Q99726 388 aa23.88■■□□□ 1.41
CSNK1E-203ENST00000396832 DGCR6LQ9BY27 220 aa23.88■■□□□ 1.41
CSNK1E-203ENST00000396832 SIAEQ9HAT2 523 aa23.88■■□□□ 1.41
CSNK1E-203ENST00000396832 ZNF639Q9UID6 485 aa23.88■■□□□ 1.41
CSNK1E-203ENST00000396832 H3BMM5 538 aa23.88■■□□□ 1.41
CSNK1E-203ENST00000396832 UGT2B4P06133 528 aa23.88■■□□□ 1.41
CSNK1E-203ENST00000396832 CRHBPP24387 322 aa23.88■■□□□ 1.41
CSNK1E-203ENST00000396832 CACNB2Q08289 660 aaPredicted RBP23.88■■□□□ 1.41
CSNK1E-203ENST00000396832 CBX2Q14781 532 aaPredicted RBP23.88■■□□□ 1.41
CSNK1E-203ENST00000396832 PRAMEF19Q5SWL8 479 aa23.88■■□□□ 1.41
CSNK1E-203ENST00000396832 TTC30BQ8N4P2 665 aa23.88■■□□□ 1.41
CSNK1E-203ENST00000396832 MINDY2Q8NBR6 621 aa23.88■■□□□ 1.41
CSNK1E-203ENST00000396832 LPPQ93052 612 aa23.88■■□□□ 1.41
CSNK1E-203ENST00000396832 VPS33AQ96AX1 596 aa23.88■■□□□ 1.41
CSNK1E-203ENST00000396832 NSMCE3Q96MG7 304 aa23.88■■□□□ 1.41
CSNK1E-203ENST00000396832 EHD1Q9H4M9 534 aa23.88■■□□□ 1.41
CSNK1E-203ENST00000396832 MTRRQ9UBK8 725 aa23.88■■□□□ 1.41
CSNK1E-203ENST00000396832 PCDHA9Q9Y5H5 950 aa23.88■■□□□ 1.41
CSNK1E-203ENST00000396832 A0A1B0GTL3 188 aa23.87■■□□□ 1.41
CSNK1E-203ENST00000396832 CASTOR2A6NHX0 329 aa23.87■■□□□ 1.41
CSNK1E-203ENST00000396832 XYLBO75191 536 aa23.87■■□□□ 1.41
CSNK1E-203ENST00000396832 GSK3BP49841 420 aa23.87■■□□□ 1.41
CSNK1E-203ENST00000396832 PYCR3Q53H96 274 aa23.87■■□□□ 1.41
CSNK1E-203ENST00000396832 RABL3Q5HYI8 236 aa23.87■■□□□ 1.41
CSNK1E-203ENST00000396832 HECTD2Q5U5R9 776 aa23.87■■□□□ 1.41
CSNK1E-203ENST00000396832 SLC16A12Q6ZSM3 486 aa23.87■■□□□ 1.41
CSNK1E-203ENST00000396832 TFAP2DQ7Z6R9 452 aa23.87■■□□□ 1.41
CSNK1E-203ENST00000396832 DSG4Q86SJ6 1040 aa23.87■■□□□ 1.41
CSNK1E-203ENST00000396832 C3orf58Q8NDZ4 430 aa23.87■■□□□ 1.41
CSNK1E-203ENST00000396832 ZFP90Q8TF47 636 aa23.87■■□□□ 1.41
CSNK1E-203ENST00000396832 MRM3Q9HC36 420 aaKnown RBP23.87■■□□□ 1.41
CSNK1E-203ENST00000396832 GJB3O75712 270 aa23.87■■□□□ 1.41
CSNK1E-203ENST00000396832 DDNO94850 711 aaPredicted RBP23.87■■□□□ 1.41
CSNK1E-203ENST00000396832 LINC00032P0C843 101 aa23.87■■□□□ 1.41
CSNK1E-203ENST00000396832 SMIM10L2AP0DMW4 78 aa23.87■■□□□ 1.41
CSNK1E-203ENST00000396832 SMIM10L2BP0DMW5 78 aa23.87■■□□□ 1.41
CSNK1E-203ENST00000396832 SH3BP2P78314 561 aa23.87■■□□□ 1.41
CSNK1E-203ENST00000396832 POU4F1Q01851 419 aa23.87■■□□□ 1.41
CSNK1E-203ENST00000396832 SF3B4Q15427 424 aaKnown RBP eCLIP23.87■■□□□ 1.413e-18■■■■□ 21.6
CSNK1E-203ENST00000396832 HABP4Q5JVS0 413 aaKnown RBP23.87■■□□□ 1.41
CSNK1E-203ENST00000396832 SCIMPQ6UWF3 145 aa23.87■■□□□ 1.41
CSNK1E-203ENST00000396832 LEMD2Q8NC56 503 aa23.87■■□□□ 1.41
CSNK1E-203ENST00000396832 CTRCQ99895 268 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms