RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 KIR2DS3K7RE56 304 aa8.35□□□□□ -1.07
SCFD1-202ENST00000396629 LRCH4O75427 683 aa8.35□□□□□ -1.07
SCFD1-202ENST00000396629 CEACAM4O75871 244 aa8.35□□□□□ -1.07
SCFD1-202ENST00000396629 SLC2A4P14672 509 aa8.35□□□□□ -1.07
SCFD1-202ENST00000396629 TNFAIP3P21580 790 aa8.35□□□□□ -1.07
SCFD1-202ENST00000396629 ZNF143P52747 638 aaPredicted RBP8.35□□□□□ -1.07
SCFD1-202ENST00000396629 TPI1P60174 286 aa8.35□□□□□ -1.07
SCFD1-202ENST00000396629 SH3BP2P78314 561 aa8.35□□□□□ -1.07
SCFD1-202ENST00000396629 CDR2Q01850 454 aa8.35□□□□□ -1.07
SCFD1-202ENST00000396629 KIR2DS5Q14953 304 aa8.35□□□□□ -1.07
SCFD1-202ENST00000396629 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.35□□□□□ -1.07
SCFD1-202ENST00000396629 CPZQ66K79 652 aa8.35□□□□□ -1.07
SCFD1-202ENST00000396629 JMJD6Q6NYC1 403 aaPredicted RBP8.35□□□□□ -1.07
SCFD1-202ENST00000396629 ARHGAP36Q6ZRI8 547 aa8.35□□□□□ -1.07
SCFD1-202ENST00000396629 RFLNAQ6ZTI6 216 aa8.35□□□□□ -1.07
SCFD1-202ENST00000396629 MARK2Q7KZI7 788 aaKnown RBP8.35□□□□□ -1.07
SCFD1-202ENST00000396629 ZNF765Q7L2R6 523 aa8.35□□□□□ -1.07
SCFD1-202ENST00000396629 TSPAN33Q86UF1 283 aa8.35□□□□□ -1.07
SCFD1-202ENST00000396629 TRIM74Q86UV6 250 aa8.35□□□□□ -1.07
SCFD1-202ENST00000396629 RASGRP3Q8IV61 690 aa8.35□□□□□ -1.07
SCFD1-202ENST00000396629 FNIP1Q8TF40 1166 aa8.35□□□□□ -1.07
SCFD1-202ENST00000396629 MCCC1Q96RQ3 725 aaPredicted RBP8.35□□□□□ -1.07
SCFD1-202ENST00000396629 SELENOOQ9BVL4 669 aa8.35□□□□□ -1.07
SCFD1-202ENST00000396629 STK33Q9BYT3 514 aa8.35□□□□□ -1.07
SCFD1-202ENST00000396629 NDST4Q9H3R1 872 aa8.35□□□□□ -1.07
SCFD1-202ENST00000396629 ACTL8Q9H568 366 aa8.35□□□□□ -1.07
SCFD1-202ENST00000396629 SP110Q9HB58 689 aa8.35□□□□□ -1.07
SCFD1-202ENST00000396629 CNOT8Q9UFF9 292 aaKnown RBP8.35□□□□□ -1.07
SCFD1-202ENST00000396629 TCRBV5S1A1TA0A578 114 aa8.34□□□□□ -1.07
SCFD1-202ENST00000396629 TTC24A2A3L6 582 aaPredicted RBP8.34□□□□□ -1.07
SCFD1-202ENST00000396629 OR5K4A6NMS3 321 aa8.34□□□□□ -1.07
SCFD1-202ENST00000396629 F8VZ95 297 aa8.34□□□□□ -1.07
SCFD1-202ENST00000396629 PYGLP06737 847 aa8.34□□□□□ -1.07
SCFD1-202ENST00000396629 UNGP13051 313 aaPredicted RBP8.34□□□□□ -1.07
SCFD1-202ENST00000396629 F3P13726 295 aa8.34□□□□□ -1.07
SCFD1-202ENST00000396629 UCHL3P15374 230 aa8.34□□□□□ -1.07
SCFD1-202ENST00000396629 CASP14P31944 242 aa8.34□□□□□ -1.07
SCFD1-202ENST00000396629 CCL11P51671 97 aa8.34□□□□□ -1.07
SCFD1-202ENST00000396629 UBE2IP63279 158 aaKnown RBP8.34□□□□□ -1.07
SCFD1-202ENST00000396629 LAMB3Q13751 1172 aa8.34□□□□□ -1.07
SCFD1-202ENST00000396629 LBRQ14739 615 aaKnown RBP8.34□□□□□ -1.07
SCFD1-202ENST00000396629 PTPRRQ15256 657 aa8.34□□□□□ -1.07
SCFD1-202ENST00000396629 VWA3BQ502W6 1294 aa8.34□□□□□ -1.07
SCFD1-202ENST00000396629 MIIPQ5JXC2 388 aa8.34□□□□□ -1.07
SCFD1-202ENST00000396629 TRIM72Q6ZMU5 477 aa8.34□□□□□ -1.07
SCFD1-202ENST00000396629 HPS6Q86YV9 775 aa8.34□□□□□ -1.07
SCFD1-202ENST00000396629 AVL9Q8NBF6 648 aa8.34□□□□□ -1.07
SCFD1-202ENST00000396629 TTC13Q8NBP0 860 aa8.34□□□□□ -1.07
SCFD1-202ENST00000396629 C3orf20Q8ND61 904 aa8.34□□□□□ -1.07
SCFD1-202ENST00000396629 AP2M1Q96CW1 435 aa8.34□□□□□ -1.07
SCFD1-202ENST00000396629 ZNF599Q96NL3 588 aa8.34□□□□□ -1.07
SCFD1-202ENST00000396629 NUDCD1Q96RS6 583 aa8.34□□□□□ -1.07
SCFD1-202ENST00000396629 AGAP2Q99490 1192 aa8.34□□□□□ -1.07
SCFD1-202ENST00000396629 GPR87Q9BY21 358 aa8.34□□□□□ -1.07
SCFD1-202ENST00000396629 BRD8Q9H0E9 1235 aa8.34□□□□□ -1.07
SCFD1-202ENST00000396629 KIAA1468Q9P260 1216 aa8.34□□□□□ -1.07
SCFD1-202ENST00000396629 CPNE7Q9UBL6 633 aa8.34□□□□□ -1.07
SCFD1-202ENST00000396629 ZNHIT2Q9UHR6 403 aa8.34□□□□□ -1.07
SCFD1-202ENST00000396629 CD84Q9UIB8 345 aa8.34□□□□□ -1.07
SCFD1-202ENST00000396629 SLC5A6Q9Y289 635 aa8.34□□□□□ -1.07
SCFD1-202ENST00000396629 DPM1O60762 260 aa8.34□□□□□ -1.07
SCFD1-202ENST00000396629 CBX6O95503 412 aa8.34□□□□□ -1.07
SCFD1-202ENST00000396629 PTPN4P29074 926 aa8.34□□□□□ -1.07
SCFD1-202ENST00000396629 HSPA9P38646 679 aaKnown RBP8.34□□□□□ -1.07
SCFD1-202ENST00000396629 SLC10A7Q0GE19 358 aa8.34□□□□□ -1.07
SCFD1-202ENST00000396629 TRAF2Q12933 501 aa8.34□□□□□ -1.07
SCFD1-202ENST00000396629 CHAF1BQ13112 559 aa8.34□□□□□ -1.07
SCFD1-202ENST00000396629 CHRNA6Q15825 494 aa8.34□□□□□ -1.07
SCFD1-202ENST00000396629 TMCO4Q5TGY1 634 aa8.34□□□□□ -1.07
SCFD1-202ENST00000396629 CHST15Q7LFX5 561 aaPredicted RBP8.34□□□□□ -1.07
SCFD1-202ENST00000396629 PRSS42Q7Z5A4 293 aa8.34□□□□□ -1.07
SCFD1-202ENST00000396629 SYVN1Q86TM6 617 aa8.34□□□□□ -1.07
SCFD1-202ENST00000396629 PDCD6IPQ8WUM4 868 aaKnown RBP8.34□□□□□ -1.07
SCFD1-202ENST00000396629 KLHL6Q8WZ60 621 aa8.34□□□□□ -1.07
SCFD1-202ENST00000396629 RUFY1Q96T51 708 aa8.34□□□□□ -1.07
SCFD1-202ENST00000396629 ING2Q9H160 280 aa8.34□□□□□ -1.07
SCFD1-202ENST00000396629 ACSS2Q9NR19 701 aa8.34□□□□□ -1.07
SCFD1-202ENST00000396629 ADAM22Q9P0K1 906 aa8.34□□□□□ -1.07
SCFD1-202ENST00000396629 VPS18Q9P253 973 aa8.34□□□□□ -1.07
SCFD1-202ENST00000396629 LNPEPQ9UIQ6 1025 aa8.34□□□□□ -1.07
SCFD1-202ENST00000396629 PRRC2CQ9Y520 2896 aaKnown RBP8.33□□□□□ -1.08
SCFD1-202ENST00000396629 EIF3CLB5ME19 914 aaKnown RBP8.33□□□□□ -1.08
SCFD1-202ENST00000396629 DFFAO00273 331 aa8.33□□□□□ -1.08
SCFD1-202ENST00000396629 EEF2KO00418 725 aaKnown RBP8.33□□□□□ -1.08
SCFD1-202ENST00000396629 PGLSO95336 258 aa8.33□□□□□ -1.08
SCFD1-202ENST00000396629 ASMTLO95671 621 aa8.33□□□□□ -1.08
SCFD1-202ENST00000396629 PRKCSHP14314 528 aaPredicted RBP8.33□□□□□ -1.08
SCFD1-202ENST00000396629 XRCC1P18887 633 aaPredicted RBP8.33□□□□□ -1.08
SCFD1-202ENST00000396629 LEPRP48357 1165 aaKnown RBP8.33□□□□□ -1.08
SCFD1-202ENST00000396629 SEPHS1P49903 392 aa8.33□□□□□ -1.08
SCFD1-202ENST00000396629 CLCNKAP51800 687 aa8.33□□□□□ -1.08
SCFD1-202ENST00000396629 PTSQ03393 145 aa8.33□□□□□ -1.08
SCFD1-202ENST00000396629 RALGPS1Q5JS13 557 aa8.33□□□□□ -1.08
SCFD1-202ENST00000396629 SLC6A19Q695T7 634 aa8.33□□□□□ -1.08
SCFD1-202ENST00000396629 USP45Q70EL2 814 aa8.33□□□□□ -1.08
SCFD1-202ENST00000396629 PPP1R3BQ86XI6 285 aa8.33□□□□□ -1.08
SCFD1-202ENST00000396629 PHF13Q86YI8 300 aaPredicted RBP8.33□□□□□ -1.08
SCFD1-202ENST00000396629 PGBD5Q8N414 524 aa8.33□□□□□ -1.08
SCFD1-202ENST00000396629 RBMXL3Q8N7X1 1067 aaKnown RBP8.33□□□□□ -1.08
SCFD1-202ENST00000396629 EXD1Q8NHP7 514 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms