RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 ARHGAP36Q6ZRI8 547 aa17.47■□□□□ 0.39
TNFSF13-205ENST00000396545 LINC00523Q86TU6 105 aa17.47■□□□□ 0.39
TNFSF13-205ENST00000396545 ZNF354CQ86Y25 554 aa17.47■□□□□ 0.39
TNFSF13-205ENST00000396545 CTAGE3PQ8IX95 158 aa17.47■□□□□ 0.39
TNFSF13-205ENST00000396545 CACNA2D3Q8IZS8 1091 aa17.47■□□□□ 0.39
TNFSF13-205ENST00000396545 GDAP1Q8TB36 358 aa17.47■□□□□ 0.39
TNFSF13-205ENST00000396545 ALG14Q96F25 216 aa17.47■□□□□ 0.39
TNFSF13-205ENST00000396545 SERAC1Q96JX3 654 aa17.47■□□□□ 0.39
TNFSF13-205ENST00000396545 GLOD4Q9HC38 313 aa17.47■□□□□ 0.39
TNFSF13-205ENST00000396545 RBM22Q9NW64 420 aaKnown RBP eCLIP17.47■□□□□ 0.39
TNFSF13-205ENST00000396545 CXorf51AA0A1B0GTR3 108 aa17.46■□□□□ 0.39
TNFSF13-205ENST00000396545 TRABD2BA6NFA1 517 aa17.46■□□□□ 0.39
TNFSF13-205ENST00000396545 TCP11X1B4DZS4 312 aa17.46■□□□□ 0.39
TNFSF13-205ENST00000396545 TM9SF1O15321 606 aa17.46■□□□□ 0.39
TNFSF13-205ENST00000396545 YKT6O15498 198 aa17.46■□□□□ 0.39
TNFSF13-205ENST00000396545 KDELR3O43731 214 aa17.46■□□□□ 0.39
TNFSF13-205ENST00000396545 PEX11BO96011 259 aa17.46■□□□□ 0.39
TNFSF13-205ENST00000396545 SNRPAP09012 282 aaKnown RBP17.46■□□□□ 0.39
TNFSF13-205ENST00000396545 SERPINB9P50453 376 aa17.46■□□□□ 0.39
TNFSF13-205ENST00000396545 GEMP55040 296 aa17.46■□□□□ 0.39
TNFSF13-205ENST00000396545 NXPH1P58417 271 aa17.46■□□□□ 0.39
TNFSF13-205ENST00000396545 SLC1A5Q15758 541 aa17.46■□□□□ 0.39
TNFSF13-205ENST00000396545 CCDC157Q569K6 752 aa17.46■□□□□ 0.39
TNFSF13-205ENST00000396545 LGSNQ5TDP6 509 aa17.46■□□□□ 0.39
TNFSF13-205ENST00000396545 ARMC3Q5W041 872 aa17.46■□□□□ 0.39
TNFSF13-205ENST00000396545 DHRS13Q6UX07 377 aa17.46■□□□□ 0.39
TNFSF13-205ENST00000396545 YTHDF3Q7Z739 585 aaKnown RBP17.46■□□□□ 0.39
TNFSF13-205ENST00000396545 SRLQ86TD4 932 aa17.46■□□□□ 0.39
TNFSF13-205ENST00000396545 CNPY4Q8N129 248 aa17.46■□□□□ 0.39
TNFSF13-205ENST00000396545 OR52K2Q8NGK3 314 aa17.46■□□□□ 0.39
TNFSF13-205ENST00000396545 OR52K1Q8NGK4 314 aa17.46■□□□□ 0.39
TNFSF13-205ENST00000396545 MTBPQ96DY7 904 aa17.46■□□□□ 0.39
TNFSF13-205ENST00000396545 LRRC40Q9H9A6 602 aa17.46■□□□□ 0.39
TNFSF13-205ENST00000396545 SARDHQ9UL12 918 aa17.46■□□□□ 0.39
TNFSF13-205ENST00000396545 PCDHGA1Q9Y5H4 931 aa17.46■□□□□ 0.39
TNFSF13-205ENST00000396545 TLR4O00206 839 aa17.45■□□□□ 0.38
TNFSF13-205ENST00000396545 SLC7A4O43246 635 aa17.45■□□□□ 0.38
TNFSF13-205ENST00000396545 ATP9BO43861 1147 aa17.45■□□□□ 0.38
TNFSF13-205ENST00000396545 TAC1P20366 129 aa17.45■□□□□ 0.38
TNFSF13-205ENST00000396545 EPHA8P29322 1005 aaPredicted RBP17.45■□□□□ 0.38
TNFSF13-205ENST00000396545 FOXN2P32314 431 aa17.45■□□□□ 0.38
TNFSF13-205ENST00000396545 CCNFP41002 786 aa17.45■□□□□ 0.38
TNFSF13-205ENST00000396545 NEK3P51956 506 aa17.45■□□□□ 0.38
TNFSF13-205ENST00000396545 CRADDP78560 199 aa17.45■□□□□ 0.38
TNFSF13-205ENST00000396545 CRYMQ14894 314 aa17.45■□□□□ 0.38
TNFSF13-205ENST00000396545 COL28A1Q2UY09 1125 aa17.45■□□□□ 0.38
TNFSF13-205ENST00000396545 SPANXN3Q5MJ09 141 aa17.45■□□□□ 0.38
TNFSF13-205ENST00000396545 NAPEPLDQ6IQ20 393 aa17.45■□□□□ 0.38
TNFSF13-205ENST00000396545 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.45■□□□□ 0.38
TNFSF13-205ENST00000396545 DSG4Q86SJ6 1040 aa17.45■□□□□ 0.38
TNFSF13-205ENST00000396545 TAX1BP1Q86VP1 789 aa17.45■□□□□ 0.38
TNFSF13-205ENST00000396545 APOPT1Q96IL0 206 aa17.45■□□□□ 0.38
TNFSF13-205ENST00000396545 FEM1AQ9BSK4 669 aa17.45■□□□□ 0.38
TNFSF13-205ENST00000396545 SLC25A51Q9H1U9 297 aa17.45■□□□□ 0.38
TNFSF13-205ENST00000396545 KDM4CQ9H3R0 1056 aa17.45■□□□□ 0.38
TNFSF13-205ENST00000396545 MKS1Q9NXB0 559 aa17.45■□□□□ 0.38
TNFSF13-205ENST00000396545 OR51B4Q9Y5P0 310 aa17.45■□□□□ 0.38
TNFSF13-205ENST00000396545 FAM169AQ9Y6X4 670 aa17.45■□□□□ 0.38
TNFSF13-205ENST00000396545 TBC1D3DA0A087WVF3 549 aa17.45■□□□□ 0.38
TNFSF13-205ENST00000396545 TBC1D3IA0A087WXS9 549 aa17.45■□□□□ 0.38
TNFSF13-205ENST00000396545 TBC1D3EA0A087X179 549 aa17.45■□□□□ 0.38
TNFSF13-205ENST00000396545 TBC1D3KA0A087X1G2 549 aa17.45■□□□□ 0.38
TNFSF13-205ENST00000396545 TBC1D3FA6NER0 549 aaPredicted RBP17.45■□□□□ 0.38
TNFSF13-205ENST00000396545 TBC1D3LB9A6J9 549 aa17.45■□□□□ 0.38
TNFSF13-205ENST00000396545 PLK4O00444 970 aa17.45■□□□□ 0.38
TNFSF13-205ENST00000396545 PLRG1O43660 514 aaKnown RBP17.45■□□□□ 0.38
TNFSF13-205ENST00000396545 TBC1D3HP0C7X1 549 aa17.45■□□□□ 0.38
TNFSF13-205ENST00000396545 CES1P23141 567 aa17.45■□□□□ 0.38
TNFSF13-205ENST00000396545 CNTFP26441 200 aa17.45■□□□□ 0.38
TNFSF13-205ENST00000396545 NPY2RP49146 381 aa17.45■□□□□ 0.38
TNFSF13-205ENST00000396545 ARRB1P49407 418 aaPredicted RBP17.45■□□□□ 0.38
TNFSF13-205ENST00000396545 CYP4F3Q08477 520 aa17.45■□□□□ 0.38
TNFSF13-205ENST00000396545 ITIH4Q14624 930 aa17.45■□□□□ 0.38
TNFSF13-205ENST00000396545 PDK4Q16654 411 aa17.45■□□□□ 0.38
TNFSF13-205ENST00000396545 TBC1D3GQ6DHY5 549 aa17.45■□□□□ 0.38
TNFSF13-205ENST00000396545 TBC1D3CQ6IPX1 549 aa17.45■□□□□ 0.38
TNFSF13-205ENST00000396545 CASC4Q6P4E1 433 aa17.45■□□□□ 0.38
TNFSF13-205ENST00000396545 PDZD3Q86UT5 571 aa17.45■□□□□ 0.38
TNFSF13-205ENST00000396545 TMPRSS12Q86WS5 348 aa17.45■□□□□ 0.38
TNFSF13-205ENST00000396545 TBC1D3Q8IZP1 549 aaPredicted RBP17.45■□□□□ 0.38
TNFSF13-205ENST00000396545 OR8D1Q8WZ84 308 aa17.45■□□□□ 0.38
TNFSF13-205ENST00000396545 ERVMER34-1Q9H9K5 563 aa17.45■□□□□ 0.38
TNFSF13-205ENST00000396545 PDFQ9HBH1 243 aa17.45■□□□□ 0.38
TNFSF13-205ENST00000396545 SCUBE2Q9NQ36 999 aa17.45■□□□□ 0.38
TNFSF13-205ENST00000396545 GRID1Q9ULK0 1009 aa17.45■□□□□ 0.38
TNFSF13-205ENST00000396545 PPM1HQ9ULR3 514 aa17.45■□□□□ 0.38
TNFSF13-205ENST00000396545 RRP15Q9Y3B9 282 aaKnown RBP17.45■□□□□ 0.38
TNFSF13-205ENST00000396545 TRIM49D1C9J1S8 452 aa17.44■□□□□ 0.38
TNFSF13-205ENST00000396545 J3KR12 359 aa17.44■□□□□ 0.38
TNFSF13-205ENST00000396545 CBX4O00257 560 aa17.44■□□□□ 0.38
TNFSF13-205ENST00000396545 UGT1A9O60656 530 aa17.44■□□□□ 0.38
TNFSF13-205ENST00000396545 ACVRL1P37023 503 aa17.44■□□□□ 0.38
TNFSF13-205ENST00000396545 MPP3Q13368 585 aa17.44■□□□□ 0.38
TNFSF13-205ENST00000396545 OLIG2Q13516 323 aa17.44■□□□□ 0.38
TNFSF13-205ENST00000396545 LBRQ14739 615 aaKnown RBP17.44■□□□□ 0.38
TNFSF13-205ENST00000396545 SLC14A2Q15849 920 aa17.44■□□□□ 0.38
TNFSF13-205ENST00000396545 AGBL4Q5VU57 503 aa17.44■□□□□ 0.38
TNFSF13-205ENST00000396545 TIFABQ6ZNK6 161 aa17.44■□□□□ 0.38
TNFSF13-205ENST00000396545 TMEM135Q86UB9 458 aa17.44■□□□□ 0.38
TNFSF13-205ENST00000396545 MFSD2AQ8NA29 543 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms