RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 GLB1L3Q8NCI6 653 aaPredicted RBP8.39□□□□□ -1.07
NDE1-202ENST00000396355 PDPRQ8NCN5 879 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 SMG8Q8ND04 991 aaKnown RBP8.39□□□□□ -1.07
NDE1-202ENST00000396355 C7orf26Q96N11 449 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 INO80BQ9C086 356 aaPredicted RBP8.39□□□□□ -1.07
NDE1-202ENST00000396355 RANGRFQ9HD47 186 aaPredicted RBP8.39□□□□□ -1.07
NDE1-202ENST00000396355 ITGA11Q9UKX5 1188 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 PTPRJQ12913 1337 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 ARID1AO14497 2285 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 BRCA2P51587 3418 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 KCNU1A8MYU2 1149 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 PMM2O15305 246 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 ASS1P00966 412 aaKnown RBP8.39□□□□□ -1.07
NDE1-202ENST00000396355 SERPINE1P05121 402 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 IL7P13232 177 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 SLC15A1P46059 708 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 CAPZA1P52907 286 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 NCS1P62166 190 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 NAB1Q13506 487 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 SIM2Q14190 667 aaPredicted RBP8.39□□□□□ -1.07
NDE1-202ENST00000396355 GRM2Q14416 872 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 SNAPC1Q16533 368 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 PYDC2Q56P42 97 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 AGAP7PQ5VUJ5 663 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 ZNF613Q6PF04 617 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 C10orf107Q8IVU9 208 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 C4orf19Q8IY42 314 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 EMC1Q8N766 993 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 DNAJB14Q8TBM8 379 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 ZNF516Q92618 1163 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 FBXL18Q96ME1 805 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 FAM129BQ96TA1 746 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 DPCDQ9BVM2 203 aaPredicted RBP8.39□□□□□ -1.07
NDE1-202ENST00000396355 RACGAP1Q9H0H5 632 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 TTYH1Q9H313 450 aaPredicted RBP8.39□□□□□ -1.07
NDE1-202ENST00000396355 ALG2Q9H553 416 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 LGALS13Q9UHV8 139 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 PFDN2Q9UHV9 154 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 ING4Q9UNL4 249 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 DENND3A2RUS2 1198 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 TRIM38O00635 465 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 TO15178 435 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 TOXO94900 526 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 STBD1O95210 358 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 TGM2P21980 687 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 IVDP26440 423 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 CAPGP40121 348 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 BNC1Q01954 994 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 NFE2L1Q14494 772 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 ARHGAP17Q68EM7 881 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 KRT39Q6A163 491 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 ARHGAP36Q6ZRI8 547 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 NIPA1Q7RTP0 329 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 ZNF438Q7Z4V0 828 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 ANKRD53Q8N9V6 530 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 BEST2Q8NFU1 509 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 OR2T3Q8NH03 318 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 ACTL9Q8TC94 416 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 NODALQ96S42 347 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 CPNE7Q9UBL6 633 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 DNMT3LQ9UJW3 386 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 SLC30A1Q9Y6M5 507 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 MYH9P35579 1960 aaKnown RBP8.38□□□□□ -1.07
NDE1-202ENST00000396355 OR5F1O95221 314 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 FGFR1P11362 822 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 UNGP13051 313 aaPredicted RBP8.38□□□□□ -1.07
NDE1-202ENST00000396355 SFNP31947 248 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 ALDH7A1P49419 539 aaKnown RBP8.38□□□□□ -1.07
NDE1-202ENST00000396355 NAGLUP54802 743 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 ERVK-21P61565 698 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 RPS7P62081 194 aaKnown RBP8.38□□□□□ -1.07
NDE1-202ENST00000396355 CAP1Q01518 475 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 MXD1Q05195 221 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 PRKD1Q15139 912 aaPredicted RBP8.38□□□□□ -1.07
NDE1-202ENST00000396355 NPTX1Q15818 432 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 CCNG2Q16589 344 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 LRIT3Q3SXY7 679 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 CYP4A22Q5TCH4 519 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 RHBDF2Q6PJF5 856 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 FAM92BQ6ZTR7 304 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 ZBTB33Q86T24 672 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 METTL3Q86U44 580 aaKnown RBP8.38□□□□□ -1.07
NDE1-202ENST00000396355 COMMD7Q86VX2 200 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 GOT1L1Q8NHS2 421 aaPredicted RBP8.38□□□□□ -1.07
NDE1-202ENST00000396355 USB1Q9BQ65 265 aaKnown RBP8.38□□□□□ -1.07
NDE1-202ENST00000396355 PDCD2LQ9BRP1 358 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 FUNDC2Q9BWH2 189 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 HOXD1Q9GZZ0 328 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 MMP28Q9H239 520 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 TMEM8AQ9HCN3 771 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 EVA1BQ9NVM1 165 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 ZDHHC7Q9NXF8 308 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 GLTPQ9NZD2 209 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 ASH2LQ9UBL3 628 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 DPP7Q9UHL4 492 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 ZNF112Q9UJU3 913 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 C7orf72A4D263 438 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 E9PAM4 449 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 ARHGDIBP52566 201 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 MAZP56270 477 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms