RNA–Protein interactions for RNA: ENST00000393370.6

PTPA-207, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPA, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-207ENST00000393370 ZNF438Q7Z4V0 828 aa17.03■□□□□ 0.32
PTPA-207ENST00000393370 PTRH1Q86Y79 214 aaKnown RBP17.03■□□□□ 0.32
PTPA-207ENST00000393370 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.03■□□□□ 0.32
PTPA-207ENST00000393370 UBQLNLQ8IYU4 475 aa17.03■□□□□ 0.32
PTPA-207ENST00000393370 AFAP1L2Q8N4X5 818 aa17.03■□□□□ 0.32
PTPA-207ENST00000393370 ZNF280CQ8ND82 737 aa17.03■□□□□ 0.32
PTPA-207ENST00000393370 FLAD1Q8NFF5 587 aa17.03■□□□□ 0.32
PTPA-207ENST00000393370 CNIH3Q8TBE1 160 aa17.03■□□□□ 0.32
PTPA-207ENST00000393370 ELMO1Q92556 727 aa17.03■□□□□ 0.32
PTPA-207ENST00000393370 FAM49AQ9H0Q0 323 aaPredicted RBP17.03■□□□□ 0.32
PTPA-207ENST00000393370 FAM49BQ9NUQ9 324 aa17.03■□□□□ 0.32
PTPA-207ENST00000393370 NPAP1Q9NZP6 1156 aa17.03■□□□□ 0.32
PTPA-207ENST00000393370 BFARQ9NZS9 450 aa17.03■□□□□ 0.32
PTPA-207ENST00000393370 ERVK-18Q9QC07 812 aa17.03■□□□□ 0.32
PTPA-207ENST00000393370 PKLRP30613 574 aa17.03■□□□□ 0.32
PTPA-207ENST00000393370 SDC4P31431 198 aa17.03■□□□□ 0.32
PTPA-207ENST00000393370 GRIK1P39086 918 aa17.03■□□□□ 0.32
PTPA-207ENST00000393370 KCNAB2Q13303 367 aa17.03■□□□□ 0.32
PTPA-207ENST00000393370 DPYSL2Q16555 572 aa17.03■□□□□ 0.32
PTPA-207ENST00000393370 FAM83EQ2M2I3 478 aa17.03■□□□□ 0.32
PTPA-207ENST00000393370 ZNF484Q5JVG2 852 aa17.03■□□□□ 0.32
PTPA-207ENST00000393370 AMIGO3Q86WK7 504 aa17.03■□□□□ 0.32
PTPA-207ENST00000393370 MFSD6LQ8IWD5 586 aa17.03■□□□□ 0.32
PTPA-207ENST00000393370 RIMKLAQ8IXN7 391 aa17.03■□□□□ 0.32
PTPA-207ENST00000393370 ZNF555Q8NEP9 628 aa17.03■□□□□ 0.32
PTPA-207ENST00000393370 MCOLN3Q8TDD5 553 aa17.03■□□□□ 0.32
PTPA-207ENST00000393370 ZHX1-C8orf76Q96EF9 292 aa17.03■□□□□ 0.32
PTPA-207ENST00000393370 TMEM74Q96NL1 305 aa17.03■□□□□ 0.32
PTPA-207ENST00000393370 KCTD15Q96SI1 283 aaPredicted RBP17.03■□□□□ 0.32
PTPA-207ENST00000393370 RHOJQ9H4E5 214 aa17.03■□□□□ 0.32
PTPA-207ENST00000393370 HAT1O14929 419 aa17.02■□□□□ 0.32
PTPA-207ENST00000393370 OGTO15294 1046 aa17.02■□□□□ 0.32
PTPA-207ENST00000393370 MFSD11O43934 449 aa17.02■□□□□ 0.32
PTPA-207ENST00000393370 GOT1P17174 413 aa17.02■□□□□ 0.32
PTPA-207ENST00000393370 ITGB6P18564 788 aa17.02■□□□□ 0.32
PTPA-207ENST00000393370 CES1P23141 567 aa17.02■□□□□ 0.32
PTPA-207ENST00000393370 HRH2P25021 359 aa17.02■□□□□ 0.32
PTPA-207ENST00000393370 CRKP46108 304 aa17.02■□□□□ 0.32
PTPA-207ENST00000393370 ATP4BP51164 291 aa17.02■□□□□ 0.32
PTPA-207ENST00000393370 IFRD2Q12894 506 aaPredicted RBP17.02■□□□□ 0.32
PTPA-207ENST00000393370 ACOX1Q15067 660 aa17.02■□□□□ 0.32
PTPA-207ENST00000393370 ZNF404Q494X3 552 aa17.02■□□□□ 0.32
PTPA-207ENST00000393370 YIF1BQ5BJH7 314 aa17.02■□□□□ 0.32
PTPA-207ENST00000393370 PRR23CQ6ZRP0 262 aa17.02■□□□□ 0.32
PTPA-207ENST00000393370 PYROXD2Q8N2H3 581 aa17.02■□□□□ 0.32
PTPA-207ENST00000393370 PARP16Q8N5Y8 322 aa17.02■□□□□ 0.32
PTPA-207ENST00000393370 TAAR1Q96RJ0 339 aa17.02■□□□□ 0.32
PTPA-207ENST00000393370 GDF15Q99988 308 aa17.02■□□□□ 0.32
PTPA-207ENST00000393370 APOL2Q9BQE5 337 aa17.02■□□□□ 0.32
PTPA-207ENST00000393370 MKRN2Q9H000 416 aaKnown RBP17.02■□□□□ 0.32
PTPA-207ENST00000393370 RETREG1Q9H6L5 497 aa17.02■□□□□ 0.32
PTPA-207ENST00000393370 PCDHGB1Q9Y5G3 927 aa17.02■□□□□ 0.32
PTPA-207ENST00000393370 PTGDR2Q9Y5Y4 395 aa17.02■□□□□ 0.32
PTPA-207ENST00000393370 C12orf71A8MTZ7 269 aa17.02■□□□□ 0.31
PTPA-207ENST00000393370 UBFD1O14562 309 aaKnown RBP17.02■□□□□ 0.31
PTPA-207ENST00000393370 AHSGP02765 367 aa17.02■□□□□ 0.31
PTPA-207ENST00000393370 MYL3P08590 195 aa17.02■□□□□ 0.31
PTPA-207ENST00000393370 TPH1P17752 444 aa17.02■□□□□ 0.31
PTPA-207ENST00000393370 POLR2CP19387 275 aaPredicted RBP17.02■□□□□ 0.31
PTPA-207ENST00000393370 ATP5F1P24539 256 aaPredicted RBP17.02■□□□□ 0.31
PTPA-207ENST00000393370 NMBRP28336 390 aa17.02■□□□□ 0.31
PTPA-207ENST00000393370 HADHAP40939 763 aa17.02■□□□□ 0.31
PTPA-207ENST00000393370 NOL9Q5SY16 702 aaKnown RBP17.02■□□□□ 0.31
PTPA-207ENST00000393370 IL31Q6EBC2 164 aa17.02■□□□□ 0.31
PTPA-207ENST00000393370 FAM109AQ8N4B1 249 aa17.02■□□□□ 0.31
PTPA-207ENST00000393370 CCNYQ8ND76 341 aa17.02■□□□□ 0.31
PTPA-207ENST00000393370 CHURC1Q8WUH1 139 aa17.02■□□□□ 0.31
PTPA-207ENST00000393370 HEXDCQ8WVB3 486 aa17.02■□□□□ 0.31
PTPA-207ENST00000393370 NARFLQ9H6Q4 476 aa17.02■□□□□ 0.31
PTPA-207ENST00000393370 AKTIPQ9H8T0 292 aa17.02■□□□□ 0.31
PTPA-207ENST00000393370 C12orf10Q9HB07 376 aa17.02■□□□□ 0.31
PTPA-207ENST00000393370 ZBTB20Q9HC78 741 aaPredicted RBP17.02■□□□□ 0.31
PTPA-207ENST00000393370 TOR4AQ9NXH8 423 aa17.02■□□□□ 0.31
PTPA-207ENST00000393370 EVLQ9UI08 416 aaPredicted RBP17.02■□□□□ 0.31
PTPA-207ENST00000393370 OAS3Q9Y6K5 1087 aaKnown RBP17.02■□□□□ 0.31
PTPA-207ENST00000393370 ONECUT3O60422 494 aaPredicted RBP17.01■□□□□ 0.31
PTPA-207ENST00000393370 USP2O75604 605 aaPredicted RBP17.01■□□□□ 0.31
PTPA-207ENST00000393370 SEMA3DO95025 777 aa17.01■□□□□ 0.31
PTPA-207ENST00000393370 PSAPP07602 524 aa17.01■□□□□ 0.31
PTPA-207ENST00000393370 DNAJB13P59910 316 aa17.01■□□□□ 0.31
PTPA-207ENST00000393370 TOP3AQ13472 1001 aaPredicted RBP17.01■□□□□ 0.31
PTPA-207ENST00000393370 CLCA4Q14CN2 919 aa17.01■□□□□ 0.31
PTPA-207ENST00000393370 TUBA3EQ6PEY2 450 aa17.01■□□□□ 0.31
PTPA-207ENST00000393370 PID1Q7Z2X4 250 aa17.01■□□□□ 0.31
PTPA-207ENST00000393370 CCDC185Q8N715 623 aa17.01■□□□□ 0.31
PTPA-207ENST00000393370 KIAA1958Q8N8K9 716 aa17.01■□□□□ 0.31
PTPA-207ENST00000393370 EML4Q9HC35 981 aaKnown RBP17.01■□□□□ 0.31
PTPA-207ENST00000393370 ATP13A2Q9NQ11 1180 aa17.01■□□□□ 0.31
PTPA-207ENST00000393370 C12orf4Q9NQ89 552 aa17.01■□□□□ 0.31
PTPA-207ENST00000393370 DNMT3LQ9UJW3 386 aa17.01■□□□□ 0.31
PTPA-207ENST00000393370 COL5A3P25940 1745 aaPredicted RBP17.01■□□□□ 0.31
PTPA-207ENST00000393370 RAB10P61026 200 aa17.01■□□□□ 0.31
PTPA-207ENST00000393370 PRKCEQ02156 737 aa17.01■□□□□ 0.31
PTPA-207ENST00000393370 FCHO2Q0JRZ9 810 aa17.01■□□□□ 0.31
PTPA-207ENST00000393370 EMC2Q15006 297 aa17.01■□□□□ 0.31
PTPA-207ENST00000393370 SLC26A9Q7LBE3 791 aa17.01■□□□□ 0.31
PTPA-207ENST00000393370 ZDHHC13Q8IUH4 622 aa17.01■□□□□ 0.31
PTPA-207ENST00000393370 PHF21BQ96EK2 531 aa17.01■□□□□ 0.31
PTPA-207ENST00000393370 HEXIM2Q96MH2 286 aaKnown RBP17.01■□□□□ 0.31
PTPA-207ENST00000393370 FEM1AQ9BSK4 669 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms