RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 RPIAP49247 311 aa16.88■□□□□ 0.29
RER1-202ENST00000378512 CCDC173Q0VFZ6 552 aa16.88■□□□□ 0.29
RER1-202ENST00000378512 MEI1Q5TIA1 1274 aa16.88■□□□□ 0.29
RER1-202ENST00000378512 ITPRIPL1Q6GPH6 555 aa16.88■□□□□ 0.29
RER1-202ENST00000378512 RANBP10Q6VN20 620 aa16.88■□□□□ 0.29
RER1-202ENST00000378512 EFL1Q7Z2Z2 1120 aaKnown RBP16.88■□□□□ 0.29
RER1-202ENST00000378512 TTC30BQ8N4P2 665 aa16.88■□□□□ 0.29
RER1-202ENST00000378512 KYQ8NBH2 561 aa16.88■□□□□ 0.29
RER1-202ENST00000378512 CCL4L1Q8NHW4 92 aa16.88■□□□□ 0.29
RER1-202ENST00000378512 SNIP1Q8TAD8 396 aaKnown RBP16.88■□□□□ 0.29
RER1-202ENST00000378512 MAPK15Q8TD08 544 aa16.88■□□□□ 0.29
RER1-202ENST00000378512 NAT6Q93015 286 aa16.88■□□□□ 0.29
RER1-202ENST00000378512 SPATA13Q96N96 652 aa16.88■□□□□ 0.29
RER1-202ENST00000378512 FAM118BQ9BPY3 351 aa16.88■□□□□ 0.29
RER1-202ENST00000378512 FERMT1Q9BQL6 677 aa16.88■□□□□ 0.29
RER1-202ENST00000378512 CARS2Q9HA77 564 aaKnown RBP16.88■□□□□ 0.29
RER1-202ENST00000378512 GRPEL1Q9HAV7 217 aa16.88■□□□□ 0.29
RER1-202ENST00000378512 RAD18Q9NS91 495 aa16.88■□□□□ 0.29
RER1-202ENST00000378512 RSPH14Q9UHP6 348 aa16.88■□□□□ 0.29
RER1-202ENST00000378512 PADI4Q9UM07 663 aa16.88■□□□□ 0.29
RER1-202ENST00000378512 SHOC2Q9UQ13 582 aa16.88■□□□□ 0.29
RER1-202ENST00000378512 TCRBV7S2A1N4TA0A589 114 aa16.87■□□□□ 0.29
RER1-202ENST00000378512 GOLGA6CA6NDK9 693 aa16.87■□□□□ 0.29
RER1-202ENST00000378512 GOLGA6BA6NDN3 693 aa16.87■□□□□ 0.29
RER1-202ENST00000378512 GOLGA6L9A6NEM1 432 aa16.87■□□□□ 0.29
RER1-202ENST00000378512 C5orf60A6NFR6 353 aa16.87■□□□□ 0.29
RER1-202ENST00000378512 KCNN4O15554 427 aa16.87■□□□□ 0.29
RER1-202ENST00000378512 NOBOXO60393 691 aa16.87■□□□□ 0.29
RER1-202ENST00000378512 DNAJC6O75061 913 aa16.87■□□□□ 0.29
RER1-202ENST00000378512 USP12O75317 370 aa16.87■□□□□ 0.29
RER1-202ENST00000378512 ANXA9O76027 345 aa16.87■□□□□ 0.29
RER1-202ENST00000378512 GOLGA6DP0CG33 693 aa16.87■□□□□ 0.29
RER1-202ENST00000378512 CHRNA4P43681 627 aa16.87■□□□□ 0.29
RER1-202ENST00000378512 POLD2P49005 469 aa16.87■□□□□ 0.29
RER1-202ENST00000378512 MSLNQ13421 630 aaPredicted RBP16.87■□□□□ 0.29
RER1-202ENST00000378512 TBC1D25Q3MII6 688 aa16.87■□□□□ 0.29
RER1-202ENST00000378512 PYCR3Q53H96 274 aa16.87■□□□□ 0.29
RER1-202ENST00000378512 PDPK2PQ6A1A2 396 aa16.87■□□□□ 0.29
RER1-202ENST00000378512 CCDC70Q6NSX1 233 aa16.87■□□□□ 0.29
RER1-202ENST00000378512 OR6C4Q8NGE1 309 aa16.87■□□□□ 0.29
RER1-202ENST00000378512 FGF11Q92914 225 aa16.87■□□□□ 0.29
RER1-202ENST00000378512 NAF1Q96HR8 494 aaKnown RBP16.87■□□□□ 0.29
RER1-202ENST00000378512 PLEKHG4BQ96PX9 1271 aa16.87■□□□□ 0.29
RER1-202ENST00000378512 ZSCAN5AQ9BUG6 496 aa16.87■□□□□ 0.29
RER1-202ENST00000378512 GOLGA6AQ9NYA3 693 aa16.87■□□□□ 0.29
RER1-202ENST00000378512 HACD3Q9P035 362 aa16.87■□□□□ 0.29
RER1-202ENST00000378512 GPR34Q9UPC5 381 aa16.87■□□□□ 0.29
RER1-202ENST00000378512 DOLKQ9UPQ8 538 aa16.87■□□□□ 0.29
RER1-202ENST00000378512 R3HDM2Q9Y2K5 976 aaKnown RBP16.87■□□□□ 0.29
RER1-202ENST00000378512 OAS3Q9Y6K5 1087 aaKnown RBP16.87■□□□□ 0.29
RER1-202ENST00000378512 FGF1P05230 155 aa16.87■□□□□ 0.29
RER1-202ENST00000378512 BPIP17213 487 aa16.87■□□□□ 0.29
RER1-202ENST00000378512 ADCY8P40145 1251 aa16.87■□□□□ 0.29
RER1-202ENST00000378512 GEMP55040 296 aa16.87■□□□□ 0.29
RER1-202ENST00000378512 GABREP78334 506 aa16.87■□□□□ 0.29
RER1-202ENST00000378512 DARS2Q6PI48 645 aaKnown RBP16.87■□□□□ 0.29
RER1-202ENST00000378512 TAF8Q7Z7C8 310 aa16.87■□□□□ 0.29
RER1-202ENST00000378512 TRIM74Q86UV6 250 aa16.87■□□□□ 0.29
RER1-202ENST00000378512 TRAM1L1Q8N609 369 aa16.87■□□□□ 0.29
RER1-202ENST00000378512 RTP4Q96DX8 246 aa16.87■□□□□ 0.29
RER1-202ENST00000378512 DEPDC7Q96QD5 511 aa16.87■□□□□ 0.29
RER1-202ENST00000378512 GPR63Q9BZJ6 419 aa16.87■□□□□ 0.29
RER1-202ENST00000378512 ABCG4Q9H172 646 aa16.87■□□□□ 0.29
RER1-202ENST00000378512 CARD9Q9H257 536 aa16.87■□□□□ 0.29
RER1-202ENST00000378512 PRORYQ9H606 182 aa16.87■□□□□ 0.29
RER1-202ENST00000378512 IL17CQ9P0M4 197 aa16.87■□□□□ 0.29
RER1-202ENST00000378512 TMEM98Q9Y2Y6 226 aa16.87■□□□□ 0.29
RER1-202ENST00000378512 AAR2Q9Y312 384 aaKnown RBP16.87■□□□□ 0.29
RER1-202ENST00000378512 NTN3O00634 580 aaPredicted RBP16.86■□□□□ 0.29
RER1-202ENST00000378512 PRB1P04280 392 aa16.86■□□□□ 0.29
RER1-202ENST00000378512 PNLIPP16233 465 aa16.86■□□□□ 0.29
RER1-202ENST00000378512 PSMB4P28070 264 aa16.86■□□□□ 0.29
RER1-202ENST00000378512 GNPDA1P46926 289 aa16.86■□□□□ 0.29
RER1-202ENST00000378512 CTBSQ01459 385 aa16.86■□□□□ 0.29
RER1-202ENST00000378512 HLTFQ14527 1009 aaKnown RBP eCLIP16.86■□□□□ 0.29
RER1-202ENST00000378512 KCTD11Q693B1 232 aa16.86■□□□□ 0.29
RER1-202ENST00000378512 LRRC69Q6ZNQ3 347 aa16.86■□□□□ 0.29
RER1-202ENST00000378512 FAM46DQ8NEK8 389 aa16.86■□□□□ 0.29
RER1-202ENST00000378512 IPMKQ8NFU5 416 aa16.86■□□□□ 0.29
RER1-202ENST00000378512 WDR48Q8TAF3 677 aa16.86■□□□□ 0.29
RER1-202ENST00000378512 CCDC110Q8TBZ0 833 aa16.86■□□□□ 0.29
RER1-202ENST00000378512 PPP1R2P1Q96PQ5 205 aa16.86■□□□□ 0.29
RER1-202ENST00000378512 VPS35Q96QK1 796 aa16.86■□□□□ 0.29
RER1-202ENST00000378512 GSDMCQ9BYG8 508 aa16.86■□□□□ 0.29
RER1-202ENST00000378512 RMI1Q9H9A7 625 aa16.86■□□□□ 0.29
RER1-202ENST00000378512 ARNT2Q9HBZ2 717 aa16.86■□□□□ 0.29
RER1-202ENST00000378512 SPATS2LQ9NUQ6 558 aaKnown RBP16.86■□□□□ 0.29
RER1-202ENST00000378512 MOSPD1Q9UJG1 213 aa16.86■□□□□ 0.29
RER1-202ENST00000378512 APPL1Q9UKG1 709 aa16.86■□□□□ 0.29
RER1-202ENST00000378512 PCYT1BQ9Y5K3 369 aaPredicted RBP16.86■□□□□ 0.29
RER1-202ENST00000378512 FASNP49327 2511 aaKnown RBP16.86■□□□□ 0.29
RER1-202ENST00000378512 INPP4BO15327 924 aa16.85■□□□□ 0.29
RER1-202ENST00000378512 TCEA3O75764 348 aa16.85■□□□□ 0.29
RER1-202ENST00000378512 STK10O94804 968 aaKnown RBP16.85■□□□□ 0.29
RER1-202ENST00000378512 GLB1P16278 677 aa16.85■□□□□ 0.29
RER1-202ENST00000378512 ACTN2P35609 894 aa16.85■□□□□ 0.29
RER1-202ENST00000378512 TLE3Q04726 772 aa16.85■□□□□ 0.29
RER1-202ENST00000378512 ILF3Q12906 894 aaKnown RBP eCLIP16.85■□□□□ 0.299e-8■■■■■ 39
RER1-202ENST00000378512 LRP8Q14114 963 aa16.85■□□□□ 0.29
RER1-202ENST00000378512 OASLQ15646 514 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms