RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 GSTM2P28161 218 aa16.44■□□□□ 0.22
TRIM39-201ENST00000376656 CXCR3P49682 368 aa16.44■□□□□ 0.22
TRIM39-201ENST00000376656 ZNF846Q147U1 533 aa16.44■□□□□ 0.22
TRIM39-201ENST00000376656 POLD3Q15054 466 aaPredicted RBP16.44■□□□□ 0.22
TRIM39-201ENST00000376656 MARCH8Q5T0T0 291 aa16.44■□□□□ 0.22
TRIM39-201ENST00000376656 WSCD1Q658N2 575 aa16.44■□□□□ 0.22
TRIM39-201ENST00000376656 SLC16A12Q6ZSM3 486 aa16.44■□□□□ 0.22
TRIM39-201ENST00000376656 BPIFB1Q8TDL5 484 aa16.44■□□□□ 0.22
TRIM39-201ENST00000376656 PGAP3Q96FM1 320 aaPredicted RBP16.44■□□□□ 0.22
TRIM39-201ENST00000376656 SMOQ99835 787 aa16.44■□□□□ 0.22
TRIM39-201ENST00000376656 RNF39Q9H2S5 420 aa16.44■□□□□ 0.22
TRIM39-201ENST00000376656 MUC13Q9H3R2 512 aa16.44■□□□□ 0.22
TRIM39-201ENST00000376656 INTS7Q9NVH2 962 aaKnown RBP16.44■□□□□ 0.22
TRIM39-201ENST00000376656 RBM22Q9NW64 420 aaKnown RBP eCLIP16.44■□□□□ 0.22
TRIM39-201ENST00000376656 GPR45Q9Y5Y3 372 aa16.44■□□□□ 0.22
TRIM39-201ENST00000376656 UBXN8O00124 270 aa16.44■□□□□ 0.22
TRIM39-201ENST00000376656 TOR1BO14657 336 aa16.44■□□□□ 0.22
TRIM39-201ENST00000376656 FGF4P08620 206 aa16.44■□□□□ 0.22
TRIM39-201ENST00000376656 WARSP23381 471 aaKnown RBP16.44■□□□□ 0.22
TRIM39-201ENST00000376656 HTR1BP28222 390 aa16.44■□□□□ 0.22
TRIM39-201ENST00000376656 OR4D2P58180 307 aa16.44■□□□□ 0.22
TRIM39-201ENST00000376656 LILRA4P59901 499 aa16.44■□□□□ 0.22
TRIM39-201ENST00000376656 CCNA1P78396 465 aa16.44■□□□□ 0.22
TRIM39-201ENST00000376656 IFITM3Q01628 133 aa16.44■□□□□ 0.22
TRIM39-201ENST00000376656 SNX17Q15036 470 aa16.44■□□□□ 0.22
TRIM39-201ENST00000376656 BCL2A1Q16548 175 aa16.44■□□□□ 0.22
TRIM39-201ENST00000376656 KANK2Q63ZY3 851 aa16.44■□□□□ 0.22
TRIM39-201ENST00000376656 RNF34Q969K3 372 aa16.44■□□□□ 0.22
TRIM39-201ENST00000376656 PDGFDQ9GZP0 370 aaPredicted RBP16.44■□□□□ 0.22
TRIM39-201ENST00000376656 TXNRD2Q9NNW7 524 aa16.44■□□□□ 0.22
TRIM39-201ENST00000376656 GIT1Q9Y2X7 761 aa16.44■□□□□ 0.22
TRIM39-201ENST00000376656 PAPPA2Q9BXP8 1791 aa16.44■□□□□ 0.22
TRIM39-201ENST00000376656 PCNAP12004 261 aa16.44■□□□□ 0.22
TRIM39-201ENST00000376656 ZNF24P17028 368 aa16.44■□□□□ 0.22
TRIM39-201ENST00000376656 ZFP36L2P47974 494 aaKnown RBP16.44■□□□□ 0.22
TRIM39-201ENST00000376656 ALDH3A2P51648 485 aa16.44■□□□□ 0.22
TRIM39-201ENST00000376656 FSCN1Q16658 493 aaKnown RBP16.44■□□□□ 0.22
TRIM39-201ENST00000376656 PFKFB4Q16877 469 aa16.44■□□□□ 0.22
TRIM39-201ENST00000376656 FBXO48Q5FWF7 155 aa16.44■□□□□ 0.22
TRIM39-201ENST00000376656 THAP5Q7Z6K1 395 aa16.44■□□□□ 0.22
TRIM39-201ENST00000376656 CLEC4FQ8N1N0 589 aa16.44■□□□□ 0.22
TRIM39-201ENST00000376656 LEMD2Q8NC56 503 aa16.44■□□□□ 0.22
TRIM39-201ENST00000376656 TMBIM1Q969X1 311 aa16.44■□□□□ 0.22
TRIM39-201ENST00000376656 PRKD2Q9BZL6 878 aa16.44■□□□□ 0.22
TRIM39-201ENST00000376656 SLC39A8Q9C0K1 460 aa16.44■□□□□ 0.22
TRIM39-201ENST00000376656 CRYL1Q9Y2S2 319 aa16.44■□□□□ 0.22
TRIM39-201ENST00000376656 PDCD11Q14690 1871 aaKnown RBP16.43■□□□□ 0.22
TRIM39-201ENST00000376656 OR51F1A6NGY5 319 aa16.43■□□□□ 0.22
TRIM39-201ENST00000376656 KDM1AO60341 852 aa16.43■□□□□ 0.22
TRIM39-201ENST00000376656 ALPLP05186 524 aa16.43■□□□□ 0.22
TRIM39-201ENST00000376656 THRBP10828 461 aa16.43■□□□□ 0.22
TRIM39-201ENST00000376656 NFKB2Q00653 900 aa16.43■□□□□ 0.22
TRIM39-201ENST00000376656 DAG1Q14118 895 aa16.43■□□□□ 0.22
TRIM39-201ENST00000376656 SV2CQ496J9 727 aa16.43■□□□□ 0.22
TRIM39-201ENST00000376656 COQ5Q5HYK3 327 aa16.43■□□□□ 0.22
TRIM39-201ENST00000376656 STK32CQ86UX6 486 aa16.43■□□□□ 0.22
TRIM39-201ENST00000376656 CILP2Q8IUL8 1156 aa16.43■□□□□ 0.22
TRIM39-201ENST00000376656 RIMKLAQ8IXN7 391 aa16.43■□□□□ 0.22
TRIM39-201ENST00000376656 PARP8Q8N3A8 854 aa16.43■□□□□ 0.22
TRIM39-201ENST00000376656 SCAIQ8N9R8 606 aa16.43■□□□□ 0.22
TRIM39-201ENST00000376656 ZMIZ2Q8NF64 920 aa16.43■□□□□ 0.22
TRIM39-201ENST00000376656 PPP1R13LQ8WUF5 828 aa16.43■□□□□ 0.22
TRIM39-201ENST00000376656 CASP10Q92851 521 aa16.43■□□□□ 0.22
TRIM39-201ENST00000376656 CCDC138Q96M89 665 aa16.43■□□□□ 0.22
TRIM39-201ENST00000376656 HERC2P3Q9BVR0 1158 aa16.43■□□□□ 0.22
TRIM39-201ENST00000376656 FAM49AQ9H0Q0 323 aaPredicted RBP16.43■□□□□ 0.22
TRIM39-201ENST00000376656 CRTAC1Q9NQ79 661 aa16.43■□□□□ 0.22
TRIM39-201ENST00000376656 NDFIP2Q9NV92 336 aa16.43■□□□□ 0.22
TRIM39-201ENST00000376656 MARCH4Q9P2E8 410 aaPredicted RBP16.43■□□□□ 0.22
TRIM39-201ENST00000376656 DNMT3BQ9UBC3 853 aaKnown RBP16.43■□□□□ 0.22
TRIM39-201ENST00000376656 NEU3Q9UQ49 428 aa16.43■□□□□ 0.22
TRIM39-201ENST00000376656 OXSR1O95747 527 aaPredicted RBP16.43■□□□□ 0.22
TRIM39-201ENST00000376656 C1RP00736 705 aa16.43■□□□□ 0.22
TRIM39-201ENST00000376656 RPS12P25398 132 aaKnown RBP16.43■□□□□ 0.22
TRIM39-201ENST00000376656 KCNK10P57789 538 aa16.43■□□□□ 0.22
TRIM39-201ENST00000376656 SKIV2LQ15477 1246 aaKnown RBP16.43■□□□□ 0.22
TRIM39-201ENST00000376656 DPY19L1Q2PZI1 675 aa16.43■□□□□ 0.22
TRIM39-201ENST00000376656 MIA3Q5JRA6 1907 aa16.43■□□□□ 0.22
TRIM39-201ENST00000376656 NOL9Q5SY16 702 aaKnown RBP16.43■□□□□ 0.22
TRIM39-201ENST00000376656 TAC4Q86UU9 113 aa16.43■□□□□ 0.22
TRIM39-201ENST00000376656 OR13J1Q8NGT2 312 aa16.43■□□□□ 0.22
TRIM39-201ENST00000376656 CALML6Q8TD86 181 aa16.43■□□□□ 0.22
TRIM39-201ENST00000376656 HPS1Q92902 700 aa16.43■□□□□ 0.22
TRIM39-201ENST00000376656 PCDHGA8Q9Y5G5 932 aa16.43■□□□□ 0.22
TRIM39-201ENST00000376656 DNAJC25-GNG10A0A024R161 153 aa16.42■□□□□ 0.22
TRIM39-201ENST00000376656 MATN3O15232 486 aa16.42■□□□□ 0.22
TRIM39-201ENST00000376656 CD1DP15813 335 aa16.42■□□□□ 0.22
TRIM39-201ENST00000376656 PNPLA4P41247 253 aa16.42■□□□□ 0.22
TRIM39-201ENST00000376656 WNT3AP56704 352 aa16.42■□□□□ 0.22
TRIM39-201ENST00000376656 UFM1P61960 85 aa16.42■□□□□ 0.22
TRIM39-201ENST00000376656 OCA2Q04671 838 aa16.42■□□□□ 0.22
TRIM39-201ENST00000376656 OR4D1Q15615 310 aa16.42■□□□□ 0.22
TRIM39-201ENST00000376656 MEP1AQ16819 746 aa16.42■□□□□ 0.22
TRIM39-201ENST00000376656 SPATS1Q496A3 300 aa16.42■□□□□ 0.22
TRIM39-201ENST00000376656 RBM48Q5RL73 367 aaKnown RBP16.42■□□□□ 0.22
TRIM39-201ENST00000376656 RALGPS2Q86X27 583 aaPredicted RBP16.42■□□□□ 0.22
TRIM39-201ENST00000376656 OR6P1Q8NGX9 317 aa16.42■□□□□ 0.22
TRIM39-201ENST00000376656 MAGED4Q96JG8 741 aa16.42■□□□□ 0.22
TRIM39-201ENST00000376656 ZNF641Q96N77 438 aaPredicted RBP16.42■□□□□ 0.22
TRIM39-201ENST00000376656 TOR3AQ9H497 397 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms