RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 CHST8Q9H2A9 424 aa12.11□□□□□ -0.47
HDAC8-204ENST00000373560 ZNF552Q9H707 407 aaPredicted RBP12.11□□□□□ -0.47
HDAC8-204ENST00000373560 SARS2Q9NP81 518 aaKnown RBP12.11□□□□□ -0.47
HDAC8-204ENST00000373560 DLL4Q9NR61 685 aa12.11□□□□□ -0.47
HDAC8-204ENST00000373560 PHPT1Q9NRX4 125 aaPredicted RBP12.11□□□□□ -0.47
HDAC8-204ENST00000373560 C5AR2Q9P296 337 aa12.11□□□□□ -0.47
HDAC8-204ENST00000373560 NOVA2Q9UNW9 492 aaKnown RBP12.11□□□□□ -0.47
HDAC8-204ENST00000373560 PRKAB1Q9Y478 270 aa12.11□□□□□ -0.47
HDAC8-204ENST00000373560 SLC30A1Q9Y6M5 507 aa12.11□□□□□ -0.47
HDAC8-204ENST00000373560 MAP1AP78559 2803 aaPredicted RBP12.1□□□□□ -0.47
HDAC8-204ENST00000373560 FBN1P35555 2871 aaKnown RBP12.1□□□□□ -0.47
HDAC8-204ENST00000373560 FAM72CH0Y354 149 aa12.1□□□□□ -0.47
HDAC8-204ENST00000373560 LETM1O95202 739 aaPredicted RBP12.1□□□□□ -0.47
HDAC8-204ENST00000373560 SOD1P00441 154 aa12.1□□□□□ -0.47
HDAC8-204ENST00000373560 MT-ND3P03897 115 aa12.1□□□□□ -0.47
HDAC8-204ENST00000373560 FOLR1P15328 257 aa12.1□□□□□ -0.47
HDAC8-204ENST00000373560 KLK2P20151 261 aa12.1□□□□□ -0.47
HDAC8-204ENST00000373560 VAV2P52735 878 aa12.1□□□□□ -0.47
HDAC8-204ENST00000373560 EPHA4P54764 986 aa12.1□□□□□ -0.47
HDAC8-204ENST00000373560 DEUP1Q05D60 604 aa12.1□□□□□ -0.47
HDAC8-204ENST00000373560 RAD51Q06609 339 aa12.1□□□□□ -0.47
HDAC8-204ENST00000373560 LTBQ06643 244 aa12.1□□□□□ -0.47
HDAC8-204ENST00000373560 MTA1Q13330 715 aa12.1□□□□□ -0.47
HDAC8-204ENST00000373560 ZNF235Q14590 738 aa12.1□□□□□ -0.47
HDAC8-204ENST00000373560 PTPRRQ15256 657 aa12.1□□□□□ -0.47
HDAC8-204ENST00000373560 PYCR3Q53H96 274 aa12.1□□□□□ -0.47
HDAC8-204ENST00000373560 FAM72AQ5TYM5 149 aa12.1□□□□□ -0.47
HDAC8-204ENST00000373560 MANEALQ5VSG8 457 aa12.1□□□□□ -0.47
HDAC8-204ENST00000373560 PRAMEF17Q5VTA0 474 aa12.1□□□□□ -0.47
HDAC8-204ENST00000373560 LYPLAL1Q5VWZ2 237 aa12.1□□□□□ -0.47
HDAC8-204ENST00000373560 AFMIDQ63HM1 303 aa12.1□□□□□ -0.47
HDAC8-204ENST00000373560 FAM72DQ6L9T8 149 aa12.1□□□□□ -0.47
HDAC8-204ENST00000373560 IGFL3Q6UXB1 125 aa12.1□□□□□ -0.47
HDAC8-204ENST00000373560 RFLNAQ6ZTI6 216 aa12.1□□□□□ -0.47
HDAC8-204ENST00000373560 FAM72BQ86X60 149 aa12.1□□□□□ -0.47
HDAC8-204ENST00000373560 PLXDC1Q8IUK5 500 aa12.1□□□□□ -0.47
HDAC8-204ENST00000373560 ZNF808Q8N4W9 903 aaPredicted RBP12.1□□□□□ -0.47
HDAC8-204ENST00000373560 LMO3Q8TAP4 145 aa12.1□□□□□ -0.47
HDAC8-204ENST00000373560 SLC35C1Q96A29 364 aa12.1□□□□□ -0.47
HDAC8-204ENST00000373560 C14orf79Q96F83 325 aa12.1□□□□□ -0.47
HDAC8-204ENST00000373560 SCARF2Q96GP6 870 aaPredicted RBP12.1□□□□□ -0.47
HDAC8-204ENST00000373560 NT5C1BQ96P26 610 aa12.1□□□□□ -0.47
HDAC8-204ENST00000373560 SLX1AQ9BQ83 275 aa12.1□□□□□ -0.47
HDAC8-204ENST00000373560 G3BP2Q9UN86 482 aaKnown RBP12.1□□□□□ -0.47
HDAC8-204ENST00000373560 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.1□□□□□ -0.47
HDAC8-204ENST00000373560 PCM1Q15154 2024 aa12.1□□□□□ -0.47
HDAC8-204ENST00000373560 FN1P02751 2386 aaKnown RBP12.1□□□□□ -0.47
HDAC8-204ENST00000373560 FLNAP21333 2647 aaKnown RBP12.09□□□□□ -0.47
HDAC8-204ENST00000373560 NUP210LQ5VU65 1888 aa12.09□□□□□ -0.47
HDAC8-204ENST00000373560 A0A0U1RQS6 177 aa12.09□□□□□ -0.47
HDAC8-204ENST00000373560 J3QL48 77 aa12.09□□□□□ -0.47
HDAC8-204ENST00000373560 PDE2AO00408 941 aaPredicted RBP12.09□□□□□ -0.47
HDAC8-204ENST00000373560 GRID2O43424 1007 aa12.09□□□□□ -0.47
HDAC8-204ENST00000373560 KDELR3O43731 214 aa12.09□□□□□ -0.47
HDAC8-204ENST00000373560 STX10O60499 249 aa12.09□□□□□ -0.47
HDAC8-204ENST00000373560 RASSF9O75901 435 aa12.09□□□□□ -0.47
HDAC8-204ENST00000373560 ERCC5P28715 1186 aaPredicted RBP12.09□□□□□ -0.47
HDAC8-204ENST00000373560 ETV3P41162 512 aa12.09□□□□□ -0.47
HDAC8-204ENST00000373560 GEMIN4P57678 1058 aaKnown RBP12.09□□□□□ -0.47
HDAC8-204ENST00000373560 TUBB3Q13509 450 aa12.09□□□□□ -0.47
HDAC8-204ENST00000373560 CNGA3Q16281 694 aa12.09□□□□□ -0.47
HDAC8-204ENST00000373560 HIF1AQ16665 826 aa12.09□□□□□ -0.47
HDAC8-204ENST00000373560 PTPN20Q4JDL3 420 aa12.09□□□□□ -0.47
HDAC8-204ENST00000373560 DENND2CQ68D51 928 aa12.09□□□□□ -0.47
HDAC8-204ENST00000373560 FAM92BQ6ZTR7 304 aa12.09□□□□□ -0.47
HDAC8-204ENST00000373560 ZNF765Q7L2R6 523 aa12.09□□□□□ -0.47
HDAC8-204ENST00000373560 SLC26A9Q7LBE3 791 aa12.09□□□□□ -0.47
HDAC8-204ENST00000373560 FAM131BQ86XD5 332 aa12.09□□□□□ -0.47
HDAC8-204ENST00000373560 TMEM151BQ8IW70 566 aa12.09□□□□□ -0.47
HDAC8-204ENST00000373560 ARFGAP1Q8N6T3 406 aa12.09□□□□□ -0.47
HDAC8-204ENST00000373560 FAR1Q8WVX9 515 aa12.09□□□□□ -0.47
HDAC8-204ENST00000373560 ZNF606Q8WXB4 792 aa12.09□□□□□ -0.47
HDAC8-204ENST00000373560 RSC1A1Q92681 617 aa12.09□□□□□ -0.47
HDAC8-204ENST00000373560 MR1Q95460 341 aa12.09□□□□□ -0.47
HDAC8-204ENST00000373560 SMR3AQ99954 134 aa12.09□□□□□ -0.47
HDAC8-204ENST00000373560 MCCC2Q9HCC0 563 aa12.09□□□□□ -0.47
HDAC8-204ENST00000373560 B4GALT6Q9UBX8 382 aa12.09□□□□□ -0.47
HDAC8-204ENST00000373560 SNX7Q9UNH6 387 aa12.09□□□□□ -0.47
HDAC8-204ENST00000373560 KCNK6Q9Y257 313 aa12.09□□□□□ -0.47
HDAC8-204ENST00000373560 CCDC88CQ9P219 2028 aa12.09□□□□□ -0.47
HDAC8-204ENST00000373560 CSPG4Q6UVK1 2322 aa12.09□□□□□ -0.47
HDAC8-204ENST00000373560 CXorf51AA0A1B0GTR3 108 aa12.08□□□□□ -0.48
HDAC8-204ENST00000373560 CFAP69A5D8W1 941 aa12.08□□□□□ -0.48
HDAC8-204ENST00000373560 GOLGA6CA6NDK9 693 aa12.08□□□□□ -0.48
HDAC8-204ENST00000373560 GOLGA6BA6NDN3 693 aa12.08□□□□□ -0.48
HDAC8-204ENST00000373560 LILRA5A6NI73 299 aa12.08□□□□□ -0.48
HDAC8-204ENST00000373560 CUTAO60888 179 aa12.08□□□□□ -0.48
HDAC8-204ENST00000373560 GOLGA6DP0CG33 693 aa12.08□□□□□ -0.48
HDAC8-204ENST00000373560 EPB41P11171 864 aaKnown RBP12.08□□□□□ -0.48
HDAC8-204ENST00000373560 RPL13P26373 211 aaKnown RBP12.08□□□□□ -0.48
HDAC8-204ENST00000373560 ADORA2A-AS1P86434 159 aa12.08□□□□□ -0.48
HDAC8-204ENST00000373560 FOXD4Q12950 439 aaPredicted RBP12.08□□□□□ -0.48
HDAC8-204ENST00000373560 IZUMO3Q5VZ72 239 aa12.08□□□□□ -0.48
HDAC8-204ENST00000373560 PLEKHA7Q6IQ23 1121 aa12.08□□□□□ -0.48
HDAC8-204ENST00000373560 IYDQ6PHW0 289 aa12.08□□□□□ -0.48
HDAC8-204ENST00000373560 BRAT1Q6PJG6 821 aa12.08□□□□□ -0.48
HDAC8-204ENST00000373560 SPOCD1Q6ZMY3 1216 aa12.08□□□□□ -0.48
HDAC8-204ENST00000373560 C11orf57Q6ZUT1 292 aaPredicted RBP12.08□□□□□ -0.48
HDAC8-204ENST00000373560 MED25Q71SY5 747 aa12.08□□□□□ -0.48
HDAC8-204ENST00000373560 HSD11B1LQ7Z5J1 315 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms