RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 PARM1Q6UWI2 310 aa11.43□□□□□ -0.58
TSPAN1-201ENST00000372003 PID1Q7Z2X4 250 aa11.43□□□□□ -0.58
TSPAN1-201ENST00000372003 BNIPLQ7Z465 357 aa11.43□□□□□ -0.58
TSPAN1-201ENST00000372003 GPR180Q86V85 440 aa11.43□□□□□ -0.58
TSPAN1-201ENST00000372003 CCDC117Q8IWD4 279 aaPredicted RBP11.43□□□□□ -0.58
TSPAN1-201ENST00000372003 KLHDC8BQ8IXV7 354 aa11.43□□□□□ -0.58
TSPAN1-201ENST00000372003 LSMEM2Q8N112 164 aa11.43□□□□□ -0.58
TSPAN1-201ENST00000372003 SCML4Q8N228 414 aa11.43□□□□□ -0.58
TSPAN1-201ENST00000372003 LZTR1Q8N653 840 aa11.43□□□□□ -0.58
TSPAN1-201ENST00000372003 RNF139Q8WU17 664 aa11.43□□□□□ -0.58
TSPAN1-201ENST00000372003 TFAP2CQ92754 450 aa11.43□□□□□ -0.58
TSPAN1-201ENST00000372003 ABTB1Q969K4 478 aaPredicted RBP11.43□□□□□ -0.58
TSPAN1-201ENST00000372003 ATP6V1E2Q96A05 226 aa11.43□□□□□ -0.58
TSPAN1-201ENST00000372003 ITPKCQ96DU7 683 aa11.43□□□□□ -0.58
TSPAN1-201ENST00000372003 TCF12Q99081 682 aa11.43□□□□□ -0.58
TSPAN1-201ENST00000372003 LGMNQ99538 433 aa11.43□□□□□ -0.58
TSPAN1-201ENST00000372003 TRIM15Q9C019 465 aa11.43□□□□□ -0.58
TSPAN1-201ENST00000372003 CAAP1Q9H8G2 361 aa11.43□□□□□ -0.58
TSPAN1-201ENST00000372003 SPAG4Q9NPE6 437 aa11.43□□□□□ -0.58
TSPAN1-201ENST00000372003 CD320Q9NPF0 282 aa11.43□□□□□ -0.58
TSPAN1-201ENST00000372003 ABCC13Q9NSE7 274 aa11.43□□□□□ -0.58
TSPAN1-201ENST00000372003 NCKIPSDQ9NZQ3 722 aa11.43□□□□□ -0.58
TSPAN1-201ENST00000372003 TMEM9Q9P0T7 183 aa11.43□□□□□ -0.58
TSPAN1-201ENST00000372003 ZDHHC2Q9UIJ5 367 aa11.43□□□□□ -0.58
TSPAN1-201ENST00000372003 PAIP2BQ9ULR5 123 aaKnown RBP11.43□□□□□ -0.58
TSPAN1-201ENST00000372003 PCDHGA4Q9Y5G9 962 aa11.43□□□□□ -0.58
TSPAN1-201ENST00000372003 TMEM221A6NGB7 291 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 AQP12BA6NM10 295 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 SDHDO14521 159 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 SBK3P0C264 359 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 PORP16435 677 aaPredicted RBP11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 ATP5C1P36542 298 aaKnown RBP11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 MATKP42679 507 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 HCAR3P49019 387 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 NME5P56597 212 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 IRF9Q00978 393 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 EFEMP1Q12805 493 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 SLC25A52Q3SY17 297 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 NXNQ6DKJ4 435 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 LRRC8EQ6NSJ5 796 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 DUS1LQ6P1R4 473 aaKnown RBP11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 ERMP1Q7Z2K6 904 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 ZC3HC1Q86WB0 502 aaKnown RBP11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 MIB1Q86YT6 1006 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 CAMK1DQ8IU85 385 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 CNTN4Q8IWV2 1026 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 ADHFE1Q8IWW8 467 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 AQP12AQ8IXF9 295 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 CCDC185Q8N715 623 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 OR52K1Q8NGK4 314 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 SMARCD2Q92925 531 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 ROPN1LQ96C74 230 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 TMA16Q96EY4 203 aaKnown RBP11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 ASB16Q96NS5 453 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 TUBA1CQ9BQE3 449 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 SLC25A23Q9BV35 468 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 GKN1Q9NS71 199 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 C20orf96Q9NUD7 363 aaPredicted RBP11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 ADA2Q9NZK5 511 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 TMEM181Q9P2C4 612 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 SFMBT1Q9UHJ3 866 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 PACSIN3Q9UKS6 424 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 BLOC1S6Q9UL45 172 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 G3BP2Q9UN86 482 aaKnown RBP11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 CCL26Q9Y258 94 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 CPQQ9Y646 472 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 ZFP37Q9Y6Q3 630 aaPredicted RBP11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 PTPRDP23468 1912 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 A0A087X1B8 175 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 BBIP1A8MTZ0 92 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 DAB1O75553 588 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 PRAMEF12O95522 483 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 FYNP06241 537 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 HMBSP08397 361 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 PTPN3P26045 913 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 NDST2P52849 883 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 NAGLUP54802 743 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 ZP2Q05996 745 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 SLC44A4Q53GD3 710 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 DCAF6Q58WW2 860 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 SYPL2Q5VXT5 272 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 TANGO2Q6ICL3 276 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 PRMT9Q6P2P2 845 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 ZBTB49Q6ZSB9 765 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 LINC00523Q86TU6 105 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 DEFB106AQ8N104 65 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 ADAM32Q8TC27 787 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 PNPT1Q8TCS8 783 aaKnown RBP11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 LRRN4Q8WUT4 740 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 LRTOMTQ8WZ04 291 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 LPGAT1Q92604 370 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 FGF14Q92915 247 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 NT5C3BQ969T7 300 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 ISOC1Q96CN7 298 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 COX4I2Q96KJ9 171 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 NECAB3Q96P71 396 aaPredicted RBP11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 NPAS2Q99743 824 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 KXD1Q9BQD3 176 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 RPP25Q9BUL9 199 aaKnown RBP11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 KIFC1Q9BW19 673 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms