RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 SSX3Q99909 188 aa15.21■□□□□ 0.03
COL5A1-201ENST00000371817 TRMOQ9BU70 441 aa15.21■□□□□ 0.03
COL5A1-201ENST00000371817 BTRCQ9Y297 605 aa15.21■□□□□ 0.03
COL5A1-201ENST00000371817 FAM86B1E9PN63 330 aa15.21■□□□□ 0.03
COL5A1-201ENST00000371817 SSX5O60225 188 aa15.21■□□□□ 0.03
COL5A1-201ENST00000371817 TUBG1P23258 451 aa15.21■□□□□ 0.03
COL5A1-201ENST00000371817 PTPN11Q06124 597 aaPredicted RBP15.21■□□□□ 0.03
COL5A1-201ENST00000371817 DGLUCYQ7Z3D6 616 aa15.21■□□□□ 0.03
COL5A1-201ENST00000371817 SCGB3A2Q96PL1 93 aa15.21■□□□□ 0.03
COL5A1-201ENST00000371817 SEC14L4Q9UDX3 406 aa15.21■□□□□ 0.03
COL5A1-201ENST00000371817 SMARCB1Q12824 385 aa15.21■□□□□ 0.03
COL5A1-201ENST00000371817 TPRG1LQ5T0D9 272 aa15.21■□□□□ 0.03
COL5A1-201ENST00000371817 STXBP5Q5T5C0 1151 aa15.21■□□□□ 0.03
COL5A1-201ENST00000371817 MFSD5Q6N075 450 aa15.21■□□□□ 0.03
COL5A1-201ENST00000371817 ECHDC2Q86YB7 292 aa15.21■□□□□ 0.03
COL5A1-201ENST00000371817 OR5T3Q8NGG3 340 aa15.21■□□□□ 0.03
COL5A1-201ENST00000371817 UCMAQ8WVF2 138 aa15.21■□□□□ 0.03
COL5A1-201ENST00000371817 LRTOMTQ8WZ04 291 aa15.21■□□□□ 0.03
COL5A1-201ENST00000371817 MXRA8Q9BRK3 442 aa15.21■□□□□ 0.03
COL5A1-201ENST00000371817 MINPP1Q9UNW1 487 aa15.21■□□□□ 0.03
COL5A1-201ENST00000371817 LRATO95237 230 aa15.21■□□□□ 0.02
COL5A1-201ENST00000371817 POLR2JP52435 117 aaKnown RBP15.21■□□□□ 0.02
COL5A1-201ENST00000371817 TOMM20Q15388 145 aa15.21■□□□□ 0.02
COL5A1-201ENST00000371817 TCEA2Q15560 299 aa15.21■□□□□ 0.02
COL5A1-201ENST00000371817 KLHL22Q53GT1 634 aa15.21■□□□□ 0.02
COL5A1-201ENST00000371817 GK5Q6ZS86 529 aa15.21■□□□□ 0.02
COL5A1-201ENST00000371817 NEDD4LQ96PU5 975 aa15.21■□□□□ 0.02
COL5A1-201ENST00000371817 LRRC19Q9H756 370 aa15.21■□□□□ 0.02
COL5A1-201ENST00000371817 PLEKHA1Q9HB21 404 aa15.21■□□□□ 0.02
COL5A1-201ENST00000371817 ANKHQ9HCJ1 492 aa15.21■□□□□ 0.02
COL5A1-201ENST00000371817 TM9SF3Q9HD45 589 aa15.21■□□□□ 0.02
COL5A1-201ENST00000371817 KCNN3Q9UGI6 736 aa15.21■□□□□ 0.02
COL5A1-201ENST00000371817 KDM6AO15550 1401 aaPredicted RBP15.21■□□□□ 0.02
COL5A1-201ENST00000371817 KRT33AO76009 404 aa15.21■□□□□ 0.02
COL5A1-201ENST00000371817 RORAP35398 523 aa15.21■□□□□ 0.02
COL5A1-201ENST00000371817 ZSCAN1Q8NBB4 408 aa15.21■□□□□ 0.02
COL5A1-201ENST00000371817 ATP7AQ04656 1500 aa15.2■□□□□ 0.02
COL5A1-201ENST00000371817 E9PAM4 449 aa15.2■□□□□ 0.02
COL5A1-201ENST00000371817 TNFRSF11BO00300 401 aa15.2■□□□□ 0.02
COL5A1-201ENST00000371817 CRHR1P34998 444 aa15.2■□□□□ 0.02
COL5A1-201ENST00000371817 ZNF268Q14587 947 aaPredicted RBP15.2■□□□□ 0.02
COL5A1-201ENST00000371817 SLC39A8Q9C0K1 460 aa15.2■□□□□ 0.02
COL5A1-201ENST00000371817 IGSF9Q9P2J2 1179 aa15.2■□□□□ 0.02
COL5A1-201ENST00000371817 PORP16435 677 aaPredicted RBP15.2■□□□□ 0.02
COL5A1-201ENST00000371817 MOGQ16653 247 aa15.2■□□□□ 0.02
COL5A1-201ENST00000371817 MIIPQ5JXC2 388 aa15.2■□□□□ 0.02
COL5A1-201ENST00000371817 ZNF772Q68DY9 489 aaPredicted RBP15.2■□□□□ 0.02
COL5A1-201ENST00000371817 WDR49Q8IV35 697 aa15.2■□□□□ 0.02
COL5A1-201ENST00000371817 PPM1MQ96MI6 270 aa15.2■□□□□ 0.02
COL5A1-201ENST00000371817 HERC2P3Q9BVR0 1158 aa15.2■□□□□ 0.02
COL5A1-201ENST00000371817 COQ10BQ9H8M1 238 aa15.2■□□□□ 0.02
COL5A1-201ENST00000371817 IKZF2Q9UKS7 526 aa15.2■□□□□ 0.02
COL5A1-201ENST00000371817 PRAMEF22A3QJZ6 481 aa15.2■□□□□ 0.02
COL5A1-201ENST00000371817 AIMP2Q13155 320 aaKnown RBP15.2■□□□□ 0.02
COL5A1-201ENST00000371817 WDR62O43379 1518 aa15.2■□□□□ 0.02
COL5A1-201ENST00000371817 SPHKAPQ2M3C7 1700 aa15.2■□□□□ 0.02
COL5A1-201ENST00000371817 PET100P0DJ07 73 aa15.2■□□□□ 0.02
COL5A1-201ENST00000371817 IRF8Q02556 426 aa15.2■□□□□ 0.02
COL5A1-201ENST00000371817 TBRG1Q3YBR2 411 aa15.2■□□□□ 0.02
COL5A1-201ENST00000371817 CRY2Q49AN0 593 aa15.2■□□□□ 0.02
COL5A1-201ENST00000371817 BEND5Q7L4P6 421 aa15.2■□□□□ 0.02
COL5A1-201ENST00000371817 JAZF1Q86VZ6 243 aa15.2■□□□□ 0.02
COL5A1-201ENST00000371817 CGRRF1Q99675 332 aa15.2■□□□□ 0.02
COL5A1-201ENST00000371817 INTS7Q9NVH2 962 aaKnown RBP15.2■□□□□ 0.02
COL5A1-201ENST00000371817 RCOR3Q9P2K3 495 aaPredicted RBP15.2■□□□□ 0.02
COL5A1-201ENST00000371817 B8ZZF3 427 aa15.2■□□□□ 0.02
COL5A1-201ENST00000371817 IL7P13232 177 aa15.2■□□□□ 0.02
COL5A1-201ENST00000371817 ADIGQ0VDE8 80 aa15.2■□□□□ 0.02
COL5A1-201ENST00000371817 FSTL1Q12841 308 aa15.2■□□□□ 0.02
COL5A1-201ENST00000371817 AMIGO1Q86WK6 493 aa15.2■□□□□ 0.02
COL5A1-201ENST00000371817 TOMM5Q8N4H5 51 aa15.2■□□□□ 0.02
COL5A1-201ENST00000371817 ZNF570Q96NI8 536 aa15.2■□□□□ 0.02
COL5A1-201ENST00000371817 IGSF1Q8N6C5 1336 aa15.2■□□□□ 0.02
COL5A1-201ENST00000371817 ZNF208O43345 1280 aa15.2■□□□□ 0.02
COL5A1-201ENST00000371817 RPL35P42766 123 aaKnown RBP15.2■□□□□ 0.02
COL5A1-201ENST00000371817 SLC18A2Q05940 514 aa15.2■□□□□ 0.02
COL5A1-201ENST00000371817 AP5B1Q2VPB7 878 aa15.2■□□□□ 0.02
COL5A1-201ENST00000371817 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.2■□□□□ 0.02
COL5A1-201ENST00000371817 XKRYO14609 159 aa15.19■□□□□ 0.02
COL5A1-201ENST00000371817 PSMB4P28070 264 aa15.19■□□□□ 0.02
COL5A1-201ENST00000371817 MATKP42679 507 aa15.19■□□□□ 0.02
COL5A1-201ENST00000371817 CRADDP78560 199 aa15.19■□□□□ 0.02
COL5A1-201ENST00000371817 BNIP3Q12983 259 aa15.19■□□□□ 0.02
COL5A1-201ENST00000371817 ZNF423Q2M1K9 1284 aa15.19■□□□□ 0.02
COL5A1-201ENST00000371817 ADAMTSL2Q86TH1 951 aa15.19■□□□□ 0.02
COL5A1-201ENST00000371817 CYP3A5P20815 502 aa15.19■□□□□ 0.02
COL5A1-201ENST00000371817 RPS3P23396 243 aaKnown RBP eCLIP15.19■□□□□ 0.02
COL5A1-201ENST00000371817 RPL26P61254 145 aaKnown RBP15.19■□□□□ 0.02
COL5A1-201ENST00000371817 POLR2LP62875 67 aaKnown RBP15.19■□□□□ 0.02
COL5A1-201ENST00000371817 KLF10Q13118 480 aa15.19■□□□□ 0.02
COL5A1-201ENST00000371817 SNX15Q9NRS6 342 aa15.19■□□□□ 0.02
COL5A1-201ENST00000371817 PHF24Q9UPV7 400 aa15.19■□□□□ 0.02
COL5A1-201ENST00000371817 HCN1O60741 890 aa15.19■□□□□ 0.02
COL5A1-201ENST00000371817 ITSN1Q15811 1721 aa15.19■□□□□ 0.02
COL5A1-201ENST00000371817 DUPD1Q68J44 220 aa15.19■□□□□ 0.02
COL5A1-201ENST00000371817 SLC25A25Q6KCM7 469 aa15.19■□□□□ 0.02
COL5A1-201ENST00000371817 GDAP2Q9NXN4 497 aa15.19■□□□□ 0.02
COL5A1-201ENST00000371817 APBA3O96018 575 aa15.19■□□□□ 0.02
COL5A1-201ENST00000371817 GH1P01241 217 aa15.19■□□□□ 0.02
COL5A1-201ENST00000371817 USP45Q70EL2 814 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms