RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 LAMB3Q13751 1172 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 ITGA9Q13797 1035 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 KCNJ11Q14654 390 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 CCDC38Q502W7 563 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 SYDE1Q6ZW31 735 aaPredicted RBP14.73□□□□□ -0.05
COL9A1-204ENST00000370496 MARK2Q7KZI7 788 aaKnown RBP14.73□□□□□ -0.05
COL9A1-204ENST00000370496 OR13C4Q8NGS5 318 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 GDAP1Q8TB36 358 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 RHBDD1Q8TEB9 315 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 COX14Q96I36 57 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 DNAJC1Q96KC8 554 aaKnown RBP14.73□□□□□ -0.05
COL9A1-204ENST00000370496 TBATAQ96M53 351 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 CAMK1GQ96NX5 476 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 IL26Q9NPH9 171 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 UCKL1Q9NWZ5 548 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 APPL1Q9UKG1 709 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 DOLKQ9UPQ8 538 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 DGKBQ9Y6T7 804 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 COL5A1P20908 1838 aaPredicted RBP14.73□□□□□ -0.05
COL9A1-204ENST00000370496 DCDC2BA2VCK2 349 aa14.72□□□□□ -0.05
COL9A1-204ENST00000370496 LDB2O43679 373 aa14.72□□□□□ -0.05
COL9A1-204ENST00000370496 URI1O94763 535 aaPredicted RBP14.72□□□□□ -0.05
COL9A1-204ENST00000370496 SLC25A14O95258 325 aaPredicted RBP14.72□□□□□ -0.05
COL9A1-204ENST00000370496 TUBB4AP04350 444 aa14.72□□□□□ -0.05
COL9A1-204ENST00000370496 CSRP1P21291 193 aaKnown RBP14.72□□□□□ -0.05
COL9A1-204ENST00000370496 ADCY8P40145 1251 aa14.72□□□□□ -0.05
COL9A1-204ENST00000370496 POLD2P49005 469 aa14.72□□□□□ -0.05
COL9A1-204ENST00000370496 C2orf54Q08AI8 447 aa14.72□□□□□ -0.05
COL9A1-204ENST00000370496 MSLNQ13421 630 aaPredicted RBP14.72□□□□□ -0.05
COL9A1-204ENST00000370496 DHX34Q14147 1143 aaKnown RBP14.72□□□□□ -0.05
COL9A1-204ENST00000370496 ELOCQ15369 112 aa14.72□□□□□ -0.05
COL9A1-204ENST00000370496 CHRNA6Q15825 494 aa14.72□□□□□ -0.05
COL9A1-204ENST00000370496 ATP13A5Q4VNC0 1218 aa14.72□□□□□ -0.05
COL9A1-204ENST00000370496 CERCAMQ5T4B2 595 aa14.72□□□□□ -0.05
COL9A1-204ENST00000370496 KCTD16Q68DU8 428 aa14.72□□□□□ -0.05
COL9A1-204ENST00000370496 PSAPL1Q6NUJ1 521 aa14.72□□□□□ -0.05
COL9A1-204ENST00000370496 PIP4P1Q86T03 277 aa14.72□□□□□ -0.05
COL9A1-204ENST00000370496 JAMLQ86YT9 394 aa14.72□□□□□ -0.05
COL9A1-204ENST00000370496 GALNT13Q8IUC8 556 aa14.72□□□□□ -0.05
COL9A1-204ENST00000370496 FSTL5Q8N475 847 aaPredicted RBP14.72□□□□□ -0.05
COL9A1-204ENST00000370496 EID2Q8N6I1 236 aa14.72□□□□□ -0.05
COL9A1-204ENST00000370496 CPT1BQ92523 772 aa14.72□□□□□ -0.05
COL9A1-204ENST00000370496 KRT12Q99456 494 aa14.72□□□□□ -0.05
COL9A1-204ENST00000370496 ZCCHC2Q9C0B9 1178 aaKnown RBP14.72□□□□□ -0.05
COL9A1-204ENST00000370496 ARFGAP3Q9NP61 516 aa14.72□□□□□ -0.05
COL9A1-204ENST00000370496 VPS18Q9P253 973 aa14.72□□□□□ -0.05
COL9A1-204ENST00000370496 FTSJ1Q9UET6 329 aa14.72□□□□□ -0.05
COL9A1-204ENST00000370496 PCOLCE2Q9UKZ9 415 aa14.72□□□□□ -0.05
COL9A1-204ENST00000370496 SUFUQ9UMX1 484 aa14.72□□□□□ -0.05
COL9A1-204ENST00000370496 SLC17A4Q9Y2C5 497 aa14.72□□□□□ -0.05
COL9A1-204ENST00000370496 TMEM98Q9Y2Y6 226 aa14.72□□□□□ -0.05
COL9A1-204ENST00000370496 NEU2Q9Y3R4 380 aa14.72□□□□□ -0.05
COL9A1-204ENST00000370496 OAS3Q9Y6K5 1087 aaKnown RBP14.72□□□□□ -0.05
COL9A1-204ENST00000370496 PLXNB3Q9ULL4 1909 aa14.72□□□□□ -0.05
COL9A1-204ENST00000370496 CABIN1Q9Y6J0 2220 aa14.71□□□□□ -0.05
COL9A1-204ENST00000370496 TCRBV7S3A2A0A539 114 aa14.71□□□□□ -0.06
COL9A1-204ENST00000370496 CCL22O00626 93 aa14.71□□□□□ -0.06
COL9A1-204ENST00000370496 GPR39O43194 453 aa14.71□□□□□ -0.06
COL9A1-204ENST00000370496 TMEM63AO94886 807 aa14.71□□□□□ -0.06
COL9A1-204ENST00000370496 CEACAM5P06731 702 aa14.71□□□□□ -0.06
COL9A1-204ENST00000370496 IVLP07476 585 aa14.71□□□□□ -0.06
COL9A1-204ENST00000370496 ITGALP20701 1170 aa14.71□□□□□ -0.06
COL9A1-204ENST00000370496 MAGEA6P43360 314 aa14.71□□□□□ -0.06
COL9A1-204ENST00000370496 C1orf61Q13536 156 aa14.71□□□□□ -0.06
COL9A1-204ENST00000370496 ANKRD22Q5VYY1 191 aa14.71□□□□□ -0.06
COL9A1-204ENST00000370496 KANSL1Q7Z3B3 1105 aa14.71□□□□□ -0.06
COL9A1-204ENST00000370496 SLC25A45Q8N413 288 aa14.71□□□□□ -0.06
COL9A1-204ENST00000370496 SPATA4Q8NEY3 305 aa14.71□□□□□ -0.06
COL9A1-204ENST00000370496 STYXQ8WUJ0 223 aa14.71□□□□□ -0.06
COL9A1-204ENST00000370496 VPS35Q96QK1 796 aa14.71□□□□□ -0.06
COL9A1-204ENST00000370496 OR2M4Q96R27 311 aa14.71□□□□□ -0.06
COL9A1-204ENST00000370496 C19orf43Q9BQ61 176 aa14.71□□□□□ -0.06
COL9A1-204ENST00000370496 IL22Q9GZX6 179 aa14.71□□□□□ -0.06
COL9A1-204ENST00000370496 NLE1Q9NVX2 485 aaPredicted RBP14.71□□□□□ -0.06
COL9A1-204ENST00000370496 NLGN3Q9NZ94 848 aa14.71□□□□□ -0.06
COL9A1-204ENST00000370496 BFARQ9NZS9 450 aa14.71□□□□□ -0.06
COL9A1-204ENST00000370496 CRLS1Q9UJA2 301 aa14.71□□□□□ -0.06
COL9A1-204ENST00000370496 CNOT6Q9ULM6 557 aaKnown RBP14.71□□□□□ -0.06
COL9A1-204ENST00000370496 TCAF1Q9Y4C2 921 aa14.71□□□□□ -0.06
COL9A1-204ENST00000370496 SLC30A1Q9Y6M5 507 aa14.71□□□□□ -0.06
COL9A1-204ENST00000370496 GOLGA8MH3BSY2 632 aa14.7□□□□□ -0.06
COL9A1-204ENST00000370496 TM4SF5O14894 197 aa14.7□□□□□ -0.06
COL9A1-204ENST00000370496 TTI1O43156 1089 aa14.7□□□□□ -0.06
COL9A1-204ENST00000370496 SRP72O76094 671 aaKnown RBP14.7□□□□□ -0.06
COL9A1-204ENST00000370496 ANXA6P08133 673 aa14.7□□□□□ -0.06
COL9A1-204ENST00000370496 CELA2BP08218 269 aaPredicted RBP14.7□□□□□ -0.06
COL9A1-204ENST00000370496 AKT1P31749 480 aa14.7□□□□□ -0.06
COL9A1-204ENST00000370496 MC4RP32245 332 aa14.7□□□□□ -0.06
COL9A1-204ENST00000370496 PTGIRP43119 386 aa14.7□□□□□ -0.06
COL9A1-204ENST00000370496 GTF2H3Q13889 308 aa14.7□□□□□ -0.06
COL9A1-204ENST00000370496 DEFB133Q30KQ1 61 aa14.7□□□□□ -0.06
COL9A1-204ENST00000370496 IZUMO3Q5VZ72 239 aa14.7□□□□□ -0.06
COL9A1-204ENST00000370496 LRRC8BQ6P9F7 803 aa14.7□□□□□ -0.06
COL9A1-204ENST00000370496 ZNF534Q76KX8 674 aa14.7□□□□□ -0.06
COL9A1-204ENST00000370496 GKN2Q86XP6 184 aa14.7□□□□□ -0.06
COL9A1-204ENST00000370496 PPIL6Q8IXY8 311 aa14.7□□□□□ -0.06
COL9A1-204ENST00000370496 OR4C6Q8NH72 309 aa14.7□□□□□ -0.06
COL9A1-204ENST00000370496 DTX3LQ8TDB6 740 aa14.7□□□□□ -0.06
COL9A1-204ENST00000370496 RANBP9Q96S59 729 aa14.7□□□□□ -0.06
COL9A1-204ENST00000370496 CDC6Q99741 560 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms