RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 TCAF2A6NFQ2 919 aa8.81□□□□□ -1
TPM3-213ENST00000368545 HIDE1A8MVS5 230 aa8.81□□□□□ -1
TPM3-213ENST00000368545 RASA4BC9J798 803 aa8.81□□□□□ -1
TPM3-213ENST00000368545 F5H423 210 aaPredicted RBP8.81□□□□□ -1
TPM3-213ENST00000368545 H0Y626 953 aa8.81□□□□□ -1
TPM3-213ENST00000368545 RASA4O43374 803 aa8.81□□□□□ -1
TPM3-213ENST00000368545 CACNG3O60359 315 aa8.81□□□□□ -1
TPM3-213ENST00000368545 CLDN11O75508 207 aa8.81□□□□□ -1
TPM3-213ENST00000368545 ANXA9O76027 345 aa8.81□□□□□ -1
TPM3-213ENST00000368545 CNTN5O94779 1100 aa8.81□□□□□ -1
TPM3-213ENST00000368545 SUN1O94901 812 aa8.81□□□□□ -1
TPM3-213ENST00000368545 TRIM16O95361 564 aa8.81□□□□□ -1
TPM3-213ENST00000368545 CBX7O95931 251 aa8.81□□□□□ -1
TPM3-213ENST00000368545 POU2F2P09086 479 aa8.81□□□□□ -1
TPM3-213ENST00000368545 KRT15P19012 456 aa8.81□□□□□ -1
TPM3-213ENST00000368545 NR1D1P20393 614 aa8.81□□□□□ -1
TPM3-213ENST00000368545 C5AR1P21730 350 aa8.81□□□□□ -1
TPM3-213ENST00000368545 PTX3P26022 381 aaPredicted RBP8.81□□□□□ -1
TPM3-213ENST00000368545 STX2P32856 288 aa8.81□□□□□ -1
TPM3-213ENST00000368545 ELK3P41970 407 aa8.81□□□□□ -1
TPM3-213ENST00000368545 IFNAR2P48551 515 aa8.81□□□□□ -1
TPM3-213ENST00000368545 RENBPP51606 427 aa8.81□□□□□ -1
TPM3-213ENST00000368545 SRSF11Q05519 484 aaKnown RBP8.81□□□□□ -1
TPM3-213ENST00000368545 HNRNPDQ14103 355 aaKnown RBP8.81□□□□□ -1
TPM3-213ENST00000368545 POLD3Q15054 466 aaPredicted RBP8.81□□□□□ -1
TPM3-213ENST00000368545 RASA2Q15283 850 aa8.81□□□□□ -1
TPM3-213ENST00000368545 TUBB8Q3ZCM7 444 aa8.81□□□□□ -1
TPM3-213ENST00000368545 UBAP2Q5T6F2 1119 aaKnown RBP8.81□□□□□ -1
TPM3-213ENST00000368545 KCTD16Q68DU8 428 aa8.81□□□□□ -1
TPM3-213ENST00000368545 ANKRD34AQ69YU3 496 aa8.81□□□□□ -1
TPM3-213ENST00000368545 ZNF534Q76KX8 674 aa8.81□□□□□ -1
TPM3-213ENST00000368545 CAND1Q86VP6 1230 aaKnown RBP8.81□□□□□ -1
TPM3-213ENST00000368545 TDRPQ86YL5 185 aa8.81□□□□□ -1
TPM3-213ENST00000368545 KLHDC8BQ8IXV7 354 aa8.81□□□□□ -1
TPM3-213ENST00000368545 MAML2Q8IZL2 1156 aaPredicted RBP8.81□□□□□ -1
TPM3-213ENST00000368545 LEMD2Q8NC56 503 aa8.81□□□□□ -1
TPM3-213ENST00000368545 PPP1R35Q8TAP8 253 aa8.81□□□□□ -1
TPM3-213ENST00000368545 ZSCAN18Q8TBC5 510 aaPredicted RBP8.81□□□□□ -1
TPM3-213ENST00000368545 TLCD1Q96CP7 247 aa8.81□□□□□ -1
TPM3-213ENST00000368545 AGAP3Q96P47 875 aa8.81□□□□□ -1
TPM3-213ENST00000368545 NAT9Q9BTE0 207 aa8.81□□□□□ -1
TPM3-213ENST00000368545 CEP41Q9BYV8 373 aa8.81□□□□□ -1
TPM3-213ENST00000368545 LRRC40Q9H9A6 602 aa8.81□□□□□ -1
TPM3-213ENST00000368545 SP110Q9HB58 689 aa8.81□□□□□ -1
TPM3-213ENST00000368545 PARD6AQ9NPB6 346 aa8.81□□□□□ -1
TPM3-213ENST00000368545 DNAJC28Q9NX36 388 aa8.81□□□□□ -1
TPM3-213ENST00000368545 LGALS13Q9UHV8 139 aa8.81□□□□□ -1
TPM3-213ENST00000368545 IPO11Q9UI26 975 aaKnown RBP8.81□□□□□ -1
TPM3-213ENST00000368545 LSM7Q9UK45 103 aaKnown RBP8.81□□□□□ -1
TPM3-213ENST00000368545 ADAM21Q9UKJ8 722 aa8.81□□□□□ -1
TPM3-213ENST00000368545 CHMP2BQ9UQN3 213 aa8.81□□□□□ -1
TPM3-213ENST00000368545 ZNF510Q9Y2H8 683 aa8.81□□□□□ -1
TPM3-213ENST00000368545 ACACBO00763 2458 aa8.81□□□□□ -1
TPM3-213ENST00000368545 TRAV19A0A0A6YYK7 116 aa8.81□□□□□ -1
TPM3-213ENST00000368545 BANF1O75531 89 aa8.81□□□□□ -1
TPM3-213ENST00000368545 KCNK5O95279 499 aa8.81□□□□□ -1
TPM3-213ENST00000368545 JCHAINP01591 159 aa8.81□□□□□ -1
TPM3-213ENST00000368545 HNRNPA1P09651 372 aaKnown RBP eCLIP8.81□□□□□ -1
TPM3-213ENST00000368545 TYRP1P17643 537 aa8.81□□□□□ -1
TPM3-213ENST00000368545 HDCP19113 662 aa8.81□□□□□ -1
TPM3-213ENST00000368545 CSRP1P21291 193 aaKnown RBP8.81□□□□□ -1
TPM3-213ENST00000368545 SLC6A4P31645 630 aa8.81□□□□□ -1
TPM3-213ENST00000368545 MMP13P45452 471 aa8.81□□□□□ -1
TPM3-213ENST00000368545 IRAK1P51617 712 aa8.81□□□□□ -1
TPM3-213ENST00000368545 SLC7A9P82251 487 aa8.81□□□□□ -1
TPM3-213ENST00000368545 TNK2Q07912 1038 aa8.81□□□□□ -1
TPM3-213ENST00000368545 IL10RBQ08334 325 aa8.81□□□□□ -1
TPM3-213ENST00000368545 RARS2Q5T160 578 aaKnown RBP8.81□□□□□ -1
TPM3-213ENST00000368545 EMC10Q5UCC4 262 aa8.81□□□□□ -1
TPM3-213ENST00000368545 NAPEPLDQ6IQ20 393 aa8.81□□□□□ -1
TPM3-213ENST00000368545 ARHGAP36Q6ZRI8 547 aa8.81□□□□□ -1
TPM3-213ENST00000368545 C3orf62Q6ZUJ4 267 aa8.81□□□□□ -1
TPM3-213ENST00000368545 GAREM2Q75VX8 874 aa8.81□□□□□ -1
TPM3-213ENST00000368545 MTSS1LQ765P7 747 aa8.81□□□□□ -1
TPM3-213ENST00000368545 TAOK1Q7L7X3 1001 aa8.81□□□□□ -1
TPM3-213ENST00000368545 LINC00523Q86TU6 105 aa8.81□□□□□ -1
TPM3-213ENST00000368545 SETD3Q86TU7 594 aaPredicted RBP8.81□□□□□ -1
TPM3-213ENST00000368545 MIER2Q8N344 545 aa8.81□□□□□ -1
TPM3-213ENST00000368545 GATA6Q92908 595 aa8.81□□□□□ -1
TPM3-213ENST00000368545 HMCESQ96FZ2 354 aa8.81□□□□□ -1
TPM3-213ENST00000368545 MSANTD3Q96H12 275 aa8.81□□□□□ -1
TPM3-213ENST00000368545 FCRL5Q96RD9 977 aa8.81□□□□□ -1
TPM3-213ENST00000368545 WDR83Q9BRX9 315 aaKnown RBP8.81□□□□□ -1
TPM3-213ENST00000368545 MAGEH1Q9H213 219 aa8.81□□□□□ -1
TPM3-213ENST00000368545 SLC24A2Q9UI40 661 aa8.81□□□□□ -1
TPM3-213ENST00000368545 AGO1Q9UL18 857 aaKnown RBP8.81□□□□□ -1
TPM3-213ENST00000368545 ATRXP46100 2492 aa8.81□□□□□ -1
TPM3-213ENST00000368545 RIF1Q5UIP0 2472 aaKnown RBP8.81□□□□□ -1
TPM3-213ENST00000368545 GOLGA6L7A0A1B0GV03 622 aa8.8□□□□□ -1
TPM3-213ENST00000368545 SMIM23A6NLE4 172 aa8.8□□□□□ -1
TPM3-213ENST00000368545 PER2O15055 1255 aa8.8□□□□□ -1
TPM3-213ENST00000368545 PAPSS2O95340 614 aaPredicted RBP8.8□□□□□ -1
TPM3-213ENST00000368545 KLKB1P03952 638 aa8.8□□□□□ -1
TPM3-213ENST00000368545 AMY2AP04746 511 aa8.8□□□□□ -1
TPM3-213ENST00000368545 IRF1P10914 325 aa8.8□□□□□ -1
TPM3-213ENST00000368545 PAMP19021 973 aa8.8□□□□□ -1
TPM3-213ENST00000368545 AMY2BP19961 511 aa8.8□□□□□ -1
TPM3-213ENST00000368545 TPP2P29144 1249 aaPredicted RBP8.8□□□□□ -1
TPM3-213ENST00000368545 CCR3P51677 355 aa8.8□□□□□ -1
TPM3-213ENST00000368545 EPHA5P54756 1037 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms