RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 CLP1Q92989 425 aaKnown RBP12.84□□□□□ -0.35
PTPRK-207ENST00000368226 GKN1Q9NS71 199 aa12.84□□□□□ -0.35
PTPRK-207ENST00000368226 SLC7A2P52569 658 aa12.84□□□□□ -0.35
PTPRK-207ENST00000368226 SRP54P61011 504 aaKnown RBP12.84□□□□□ -0.35
PTPRK-207ENST00000368226 SPDYCQ5MJ68 293 aa12.84□□□□□ -0.35
PTPRK-207ENST00000368226 PPP1R15BQ5SWA1 713 aa12.84□□□□□ -0.35
PTPRK-207ENST00000368226 HGSNATQ68CP4 663 aa12.84□□□□□ -0.35
PTPRK-207ENST00000368226 KLHL17Q6TDP4 642 aa12.84□□□□□ -0.35
PTPRK-207ENST00000368226 FAM220AQ7Z4H9 259 aa12.84□□□□□ -0.35
PTPRK-207ENST00000368226 HID1Q8IV36 788 aa12.84□□□□□ -0.35
PTPRK-207ENST00000368226 FBXW8Q8N3Y1 598 aa12.84□□□□□ -0.35
PTPRK-207ENST00000368226 ZNF540Q8NDQ6 660 aa12.84□□□□□ -0.35
PTPRK-207ENST00000368226 TP53INP1Q96A56 240 aa12.84□□□□□ -0.35
PTPRK-207ENST00000368226 DTNBP1Q96EV8 351 aa12.84□□□□□ -0.35
PTPRK-207ENST00000368226 QKIQ96PU8 341 aaKnown RBP eCLIP12.84□□□□□ -0.355e-7■■■■■ 27.3
PTPRK-207ENST00000368226 TBC1D10AQ9BXI6 508 aa12.84□□□□□ -0.35
PTPRK-207ENST00000368226 RHOJQ9H4E5 214 aa12.84□□□□□ -0.35
PTPRK-207ENST00000368226 A0A0J9YYE9 177 aa12.84□□□□□ -0.35
PTPRK-207ENST00000368226 NT5EP21589 574 aa12.84□□□□□ -0.35
PTPRK-207ENST00000368226 TNFRSF8P28908 595 aa12.84□□□□□ -0.35
PTPRK-207ENST00000368226 AKT2P31751 481 aa12.84□□□□□ -0.35
PTPRK-207ENST00000368226 IRGCQ6NXR0 463 aa12.84□□□□□ -0.35
PTPRK-207ENST00000368226 KBTBD2Q8IY47 623 aa12.84□□□□□ -0.35
PTPRK-207ENST00000368226 MOSPD2Q8NHP6 518 aa12.84□□□□□ -0.35
PTPRK-207ENST00000368226 ZNF354BQ96LW1 612 aa12.84□□□□□ -0.35
PTPRK-207ENST00000368226 RNF39Q9H2S5 420 aa12.84□□□□□ -0.35
PTPRK-207ENST00000368226 ALKBH4Q9NXW9 302 aa12.84□□□□□ -0.35
PTPRK-207ENST00000368226 COPG2Q9UBF2 871 aa12.84□□□□□ -0.35
PTPRK-207ENST00000368226 GRIN2DO15399 1336 aa12.84□□□□□ -0.35
PTPRK-207ENST00000368226 INSIG1O15503 277 aa12.84□□□□□ -0.35
PTPRK-207ENST00000368226 KLHL18O94889 574 aa12.84□□□□□ -0.35
PTPRK-207ENST00000368226 MATN4O95460 622 aa12.84□□□□□ -0.35
PTPRK-207ENST00000368226 CES1P23141 567 aa12.84□□□□□ -0.35
PTPRK-207ENST00000368226 SLC6A2P23975 617 aa12.84□□□□□ -0.35
PTPRK-207ENST00000368226 CSKP41240 450 aa12.84□□□□□ -0.35
PTPRK-207ENST00000368226 GDF10P55107 478 aa12.84□□□□□ -0.35
PTPRK-207ENST00000368226 CACNG1Q06432 222 aa12.84□□□□□ -0.35
PTPRK-207ENST00000368226 SERPINA9Q86WD7 417 aa12.84□□□□□ -0.35
PTPRK-207ENST00000368226 ZCCHC7Q8N3Z6 543 aaKnown RBP12.84□□□□□ -0.35
PTPRK-207ENST00000368226 PPM1MQ96MI6 270 aa12.84□□□□□ -0.35
PTPRK-207ENST00000368226 SALL4Q9UJQ4 1053 aa12.84□□□□□ -0.35
PTPRK-207ENST00000368226 NRP1O14786 923 aa12.84□□□□□ -0.35
PTPRK-207ENST00000368226 CA12O43570 354 aa12.84□□□□□ -0.35
PTPRK-207ENST00000368226 GCATO75600 419 aa12.84□□□□□ -0.35
PTPRK-207ENST00000368226 NDST3O95803 873 aa12.84□□□□□ -0.35
PTPRK-207ENST00000368226 IDSP22304 550 aa12.84□□□□□ -0.35
PTPRK-207ENST00000368226 PAX3P23760 479 aa12.84□□□□□ -0.35
PTPRK-207ENST00000368226 CPTPQ5TA50 214 aa12.84□□□□□ -0.35
PTPRK-207ENST00000368226 CYB5D2Q8WUJ1 264 aa12.84□□□□□ -0.35
PTPRK-207ENST00000368226 SH3GL2Q99962 352 aa12.84□□□□□ -0.35
PTPRK-207ENST00000368226 PRRG4Q9BZD6 226 aa12.84□□□□□ -0.35
PTPRK-207ENST00000368226 TMEM51Q9NW97 253 aa12.84□□□□□ -0.35
PTPRK-207ENST00000368226 KCTD5Q9NXV2 234 aa12.84□□□□□ -0.35
PTPRK-207ENST00000368226 TRIM38O00635 465 aa12.83□□□□□ -0.35
PTPRK-207ENST00000368226 SYN3O14994 580 aa12.83□□□□□ -0.35
PTPRK-207ENST00000368226 ADSSP30520 456 aa12.83□□□□□ -0.35
PTPRK-207ENST00000368226 SMARCB1Q12824 385 aa12.83□□□□□ -0.35
PTPRK-207ENST00000368226 HNRNPABQ99729 332 aaKnown RBP12.83□□□□□ -0.35
PTPRK-207ENST00000368226 EPB41L1Q9H4G0 881 aa12.83□□□□□ -0.35
PTPRK-207ENST00000368226 CLDND1Q9NY35 253 aa12.83□□□□□ -0.35
PTPRK-207ENST00000368226 ENOPH1Q9UHY7 261 aa12.83□□□□□ -0.35
PTPRK-207ENST00000368226 ZNF214Q9UL59 606 aaPredicted RBP12.83□□□□□ -0.35
PTPRK-207ENST00000368226 PPEF2O14830 753 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 IL6P05231 212 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 ZNF24P17028 368 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 CDH3P22223 829 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 UGT2B15P54855 530 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 RAB14P61106 215 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 TLE2Q04725 743 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 KCTD21Q4G0X4 260 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 MTX3Q5HYI7 312 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 BHLHB9Q6PI77 547 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 CTU1Q7Z7A3 348 aaKnown RBP12.83□□□□□ -0.36
PTPRK-207ENST00000368226 DENND6AQ8IWF6 608 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 NPLOC4Q8TAT6 608 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 ZNF384Q8TF68 577 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 TSPAN18Q96SJ8 248 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 AGAP2Q99490 1192 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 FAM83DQ9H4H8 585 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 SLC17A6Q9P2U8 582 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 FZD10Q9ULW2 581 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 VNN1O95497 513 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 CYP3A5P20815 502 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 CHRNA4P43681 627 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 ZNF280AP59817 542 aaPredicted RBP12.83□□□□□ -0.36
PTPRK-207ENST00000368226 FOXM1Q08050 763 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 TTC27Q6P3X3 843 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 ARCQ7LC44 396 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 TRABD2AQ86V40 505 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 TERB1Q8NA31 727 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 SPOCK2Q92563 424 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 C19orf60Q96EN9 201 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 LMAN2LQ9H0V9 348 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 POLR3BQ9NW08 1133 aaPredicted RBP12.83□□□□□ -0.36
PTPRK-207ENST00000368226 CLN6Q9NWW5 311 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 A0A1B0GVM2 712 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 A0A1B0GW55 424 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 TCAF2A6NFQ2 919 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 SAP18O00422 153 aaKnown RBP12.83□□□□□ -0.36
PTPRK-207ENST00000368226 OR1F1O43749 312 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms